Gene

KWMTBOMO15607

Annotation

PREDICTED:_transmembrane_protein_80-like_[Amyelois_transitella]

Location

Bomo_Chr26(+):3934559-3935343      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.886

CDS

ATGGTGAATTCTAGTTTGGCTTACGAAATCCTTTTATATATAAATTCGTTTTATTTTGGTCTCTTCGCAACCTGTGAGCTCGGAACTCTCATTCTCAAATCAGTACTTATTATTGAAAAGTACAACGTTGGACAAGATCCGACTAAACTTGGTCGAGATTATGGCGTTCTATTTGGATTATTTGTGGTTGAAGCTCTGAGGCTATTGTTGGGGCGCAAAGGCAGTCTTAGCGAAAAAGATATACCAGTATTGTTCTCAGTACTACTGACAATTCCATCGATCATGGGGGTATTGTATCTCCTGGCCTTCCAAGTGGTGGTGCTCCGTATAGAGTGTATCTGGTGCACTCTAATGCTGTGTTTACAGGTTTTGGAATTTATATTTGCTTCTATGTTCATAGTTACAATGTGTAGAGGACCATCATATGATTAA

Protein

MVNSSLAYEILLYINSFYFGLFATCELGTLILKSVLIIEKYNVGQDPTKLGRDYGVLFGLFVVEALRLLLGRKGSLSEKDIPVLFSVLLTIPSIMGVLYLLAFQVVVLRIECIWCTLMLCLQVLEFIFASMFIVTMCRGPSYD

Uniprot

A0A2A4JGN0   A0A2H1VTF1   A0A3S2LH25   A0A1E1WPA9   A0A212EYJ7   S4PZW1   + More
A0A194RU21   A0A194PRF9   A0A0L7KUH3   U5EQ71   A0A2A4IVQ4   A0A2H1W2T9   T1E8Y0   W5JM41   A0A182F9H2   A0A194RQF2   A0A182R5W8   A0A182NL46   A0A182K942   A0A182P790   A0A182WV62   Q7PS73   A0A182I8T7   A0A182XXE4   A0A182MPD7   A0A182VXV5   A0A084VU70   A0A182QZ91   A0A182J0G4   A0A1B0CJ39   A0A1J1IDT7   A0A182G6T7   A0A1Q3FXR7   Q17AP6   S4NWS8   A0A1L8D922   A0A1Q3FXR9   A0A0L7LSJ5   A0A1A9W2B9   B3LXG7   A0A0M4F7J4   B3P4U2   Q9VHN0   B4PTU3   B4QXZ2   B4HL27   A0A1A9YJZ9   A0A1B0BBN0   A0A3B0KJV7   Q294K4   B4GMZ4   D0QWL9   A0A1B0GF48   B4NB04   A0A1A9UYG8   A0A1B0A0E6   B4LZG4   B4K5C3   B4JHZ9   W8B6D2   F4WFW7   A0A151XBI1   A0A195BG05   A0A158NL48   D6X4X1   A0A0L0CBB5   A0A1W4VQF1   A0A195F120   E2B6J9   A0A1Y1LMB6   A0A1A9W2C0   A0A1B0GF49   A0A1A9UYG9   A0A1B0A0E4   A0A1A9YK00   A0A034VCQ8   A0A0A1XFP9   T1GN24   B4LZG3   A0A151JSF6   A0A026WUW1   A0A195BXX4   B3P4U1   B4JHZ8   A0A0A1WQF7   A0A0T6B8Z9   B3LXG8   N6UG92   B4K5C2   A0A0K8UH09   A0A0M4EWF0   A0A1I8PBC5   B5DWH6   B4GMZ5   B4QXZ1   B4PTU4   B4HL26   Q8INQ3   A0A1I8M1B2   B4NB05  

Pubmed

22118469    23622113    26354079    26227816    20920257    23761445    + More
12364791    14747013    17210077    25244985    24438588    26483478    17510324    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    15632085    19859648    24495485    21719571    21347285    18362917    19820115    26108605    20798317    28004739    25348373    25830018    24508170    30249741    23537049    25315136   

EMBL

NWSH01001646    PCG70573.1    ODYU01004307    SOQ44036.1    RSAL01000010    RVE53677.1    + More
GDQN01002205    JAT88849.1    AGBW02011486    OWR46569.1    GAIX01000848    JAA91712.1    KQ459875    KPJ19616.1    KQ459601    KPI93715.1    JTDY01005723    KOB66696.1    GANO01003397    JAB56474.1    NWSH01005685    PCG64057.1    ODYU01005946    SOQ47368.1    GAMD01002363    JAA99227.1    ADMH02001026    GGFL01004315    ETN64373.1    MBW68493.1    KPJ19629.1    AAAB01008844    EAA06059.3    APCN01003117    AXCM01002366    ATLV01016668    KE525101    KFB41514.1    AXCN02000083    AJWK01014019    CVRI01000047    CRK97716.1    JXUM01007513    JXUM01007514    KQ560241    KXJ83640.1    GFDL01002678    JAV32367.1    CH477331    EAT43340.1    GAIX01009344    JAA83216.1    GFDF01011098    JAV02986.1    GFDL01002677    JAV32368.1    JTDY01000233    KOB78146.1    CH902617    EDV42811.1    CP012526    ALC47857.1    CH954181    EDV49886.1    AE014297    AY084168    KX531466    AAF54273.1    AAL89906.1    ACZ94850.1    ACZ94851.1    ANY27276.1    CM000160    EDW96554.1    KRK03193.1    CM000364    EDX13729.1    CH480815    EDW42991.1    JXJN01011548    JXJN01011549    OUUW01000008    SPP84048.1    CM000070    EAL28964.1    CH479185    EDW38218.1    FJ821033    ACN94718.1    CCAG010012761    CH964232    EDW80968.1    CH940650    EDW68199.1    CH933806    EDW16149.1    CH916369    EDV92907.1    GAMC01012399    GAMC01012398    JAB94157.1    GL888128    EGI66734.1    KQ982320    KYQ57731.1    KQ976488    KYM83522.1    ADTU01019255    KQ971381    EEZ97222.1    JRES01000752    KNC28759.1    KQ981866    KYN34081.1    GL445975    EFN88691.1    GEZM01053692    JAV73978.1    GAKP01017861    JAC41091.1    GBXI01004994    JAD09298.1    CAQQ02191269    EDW68198.1    KQ978530    KYN30318.1    KK107111    QOIP01000011    EZA58894.1    RLU16974.1    KQ978501    KYM93509.1    EDV49885.1    EDV92906.1    GBXI01013446    GBXI01005974    JAD00846.1    JAD08318.1    LJIG01009310    KRT83335.1    EDV42812.1    APGK01021788    KB740364    KB632275    ENN80780.1    ERL91151.1    EDW16148.1    GDHF01027942    GDHF01026694    GDHF01019909    GDHF01009646    GDHF01009357    GDHF01008053    JAI24372.1    JAI25620.1    JAI32405.1    JAI42668.1    JAI42957.1    JAI44261.1    ALC47855.1    EDY68546.1    EDW38219.1    EDX13728.1    EDW96555.1    EDW42990.1    BT053750    KX531449    AAN13397.1    ACK77668.1    ANY27259.1    EDW80969.1   

Proteomes

UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    UP000037510    + More
UP000000673    UP000069272    UP000075900    UP000075884    UP000075881    UP000075885    UP000076407    UP000007062    UP000075840    UP000076408    UP000075883    UP000075920    UP000030765    UP000075886    UP000075880    UP000092461    UP000183832    UP000069940    UP000249989    UP000008820    UP000091820    UP000007801    UP000092553    UP000008711    UP000000803    UP000002282    UP000000304    UP000001292    UP000092443    UP000092460    UP000268350    UP000001819    UP000008744    UP000092444    UP000007798    UP000078200    UP000092445    UP000008792    UP000009192    UP000001070    UP000007755    UP000075809    UP000078540    UP000005205    UP000007266    UP000037069    UP000192221    UP000078541    UP000008237    UP000015102    UP000078492    UP000053097    UP000279307    UP000078542    UP000019118    UP000030742    UP000095300    UP000095301   

PRIDE

Q9VHN0    Q8INQ3   

Pfam

PF09799   Transmemb_17        + More
PF00870   P53

Interpro

IPR019184   Uncharacterised_TM-17        + More
IPR008967   p53-like_TF_DNA-bd       
IPR011615   p53_DNA-bd       
IPR002117   p53_tumour_suppressor       
IPR012346   p53/RUNT-type_TF_DNA-bd_sf       

SUPFAM

SSF49417   SSF49417       

Gene 3D

2.60.40.720    

CDD

cd08367  P53

ProteinModelPortal

A0A2A4JGN0   A0A2H1VTF1   A0A3S2LH25   A0A1E1WPA9   A0A212EYJ7   S4PZW1   + More
A0A194RU21   A0A194PRF9   A0A0L7KUH3   U5EQ71   A0A2A4IVQ4   A0A2H1W2T9   T1E8Y0   W5JM41   A0A182F9H2   A0A194RQF2   A0A182R5W8   A0A182NL46   A0A182K942   A0A182P790   A0A182WV62   Q7PS73   A0A182I8T7   A0A182XXE4   A0A182MPD7   A0A182VXV5   A0A084VU70   A0A182QZ91   A0A182J0G4   A0A1B0CJ39   A0A1J1IDT7   A0A182G6T7   A0A1Q3FXR7   Q17AP6   S4NWS8   A0A1L8D922   A0A1Q3FXR9   A0A0L7LSJ5   A0A1A9W2B9   B3LXG7   A0A0M4F7J4   B3P4U2   Q9VHN0   B4PTU3   B4QXZ2   B4HL27   A0A1A9YJZ9   A0A1B0BBN0   A0A3B0KJV7   Q294K4   B4GMZ4   D0QWL9   A0A1B0GF48   B4NB04   A0A1A9UYG8   A0A1B0A0E6   B4LZG4   B4K5C3   B4JHZ9   W8B6D2   F4WFW7   A0A151XBI1   A0A195BG05   A0A158NL48   D6X4X1   A0A0L0CBB5   A0A1W4VQF1   A0A195F120   E2B6J9   A0A1Y1LMB6   A0A1A9W2C0   A0A1B0GF49   A0A1A9UYG9   A0A1B0A0E4   A0A1A9YK00   A0A034VCQ8   A0A0A1XFP9   T1GN24   B4LZG3   A0A151JSF6   A0A026WUW1   A0A195BXX4   B3P4U1   B4JHZ8   A0A0A1WQF7   A0A0T6B8Z9   B3LXG8   N6UG92   B4K5C2   A0A0K8UH09   A0A0M4EWF0   A0A1I8PBC5   B5DWH6   B4GMZ5   B4QXZ1   B4PTU4   B4HL26   Q8INQ3   A0A1I8M1B2   B4NB05  

KEGG

101741839    K19385 transmembrane protein 216 | (RefSeq) uncharacterized LOC101741839

GO

GO:0016021   GO:0035869   GO:1905515   GO:0005929   GO:0060271   GO:0006915   GO:0003700   GO:0005634   GO:0044212  

PANTHER

PTHR13531   PTHR11447  

Length:

143

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

86.1422899999999

Exp number, first 60 AAs:

30.19842

Total prob of N-in:

0.03792

POSSIBLE N-term signal

sequence

outside

1  -  9

TMhelix

10  -  32

inside

33  -  53

TMhelix

54  -  71

outside

72  -  80

TMhelix

81  -  103

inside

104  -  111

TMhelix

112  -  134

outside

135  -  143

 

 

Pi

229.176625

Theta

179.853479

Tajima's D

0.820057

CLR

0

CSRT

0.605119744012799

Interpretation

Uncertain