Silkworm Genome Informatics Database

Gene

KWMTBOMO15603

Pre Gene Modal

BGIBMGA010720

Annotation

PREDICTED:_myoneurin-like_[Papilio_polytes]

Location

Bomo_Chr26(-):3887233-3894808 View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear Reliability : 4.703

CDS

ATGGATTGGCAATTAACTTGTCGAGTTTGTTTAGAAACCGGTGATATGGTTTCTATTTTTGATTGGGACGAAAATAATGAACAACTAAGCGACAAATACACGTTTTGTTGCGGCGTAGAGGTTTCTAAAAACGACACTTTGCCAACACTTATCTGTTTGAATTGTGTGGATCGACTTACATTTGCATATCAATTTAAGCAACAATGTTTATCTTCTAATGATACCTTGAAAGAATGTTTGGAGGAATTCAAGCAGAGCTCAGCGGCCGCTTCTGCTACAAAAGCCTCGAAAGTTGTCGATGTTGAAACGATCACAATAAAGCAAGAAAATGGCTTGCTTCTTCAATATGAGCTGCCTGTCGAACACGATCCTCAGGTACAATGGTCTCGCGCTTCATCCACCAGGCACTCGAGTAAATCTAAAAAGAGAGGACGTCCTAGGAAGTATGTCGATGAACAAGGGTTGTCATTGTACCGACGAAAGAAGGCAAAACAGTCTAAAGAAAAAGATCCTGAAGAGTTGACCACTATGATAACCAATGCTACCATTGATATGAAAGAAGAGCCTGTTGATGAAGAAGAGCCTTTTGGAGGTGATTTTGCTGATAATGACCCTGATTATGCACCAGATGATATTGATGAAAAAATTGAAACTGAAGCTGAAGTAGAACCAGAAAAATCATCTCCACCCAAGAAACGTGGCCGCAGACGTAAGTCAGAGTCTAAATCAAAGCCCAAAGAGACTGTAAAGGAAGATGATGGAGAAGATGTATTACTCAAGGAAACGATCTTGGCATTCTCAGAGCCCATACCGGAGCACATTCTTAATCCAAAACCGAAGAAGAGATATACTAGCTCTAAGAAGAAATATGTTTATGAGAAGACACATACCTGTGAGACATGCGGAACATCGTTCACTTCAAACTCAGCACTGCAAACGCACATACGAAGACATTTAGGCATCAAGCCATTTGTATGTAGTGTTTGTGGTTTCGCGTGTGTTATGAAAGAACCGCTGAAACGTCATATGTTACGTCATACTGGAGAGCGCCCGTACAAATGCCGAATATGTGAACGTCGATTCGGAGATTATGGTACTAGACAAAAACATGAACGATTACACATGGGAATCCGACCATACCAATGTACATTATGTGGTAAATCATTCACATACTCTTATGTTCTGGCTAACCATATGCTTACACATACTGGAGAGAAAAAATATTCTTGTGGTCCATGCAATAAGAAGTTCACCAAAGCTCACCACCTGAAGTACCATAACAAAGTCCACCACAAGGAGCTATATATGCAGCAACAGATGGAGCTTGAGGCCAAGAGAATGAGACAACAGATGAACATAACTAGCCTAGGCGGTGTTGCTGGACAGGTCATTGATGGGTCCTTGCAGCTCATACAAACTACTGATGATGCTGAGGAAACCCAGATGCAAATTGTGCAAGATGATGACAAAGAAACGAATCGTGCTGTAGCAGGCATGCAAGGGGTGGTCCTGGATAATGATTTTTGTATTCAAGATGAATAA

Protein

MDWQLTCRVCLETGDMVSIFDWDENNEQLSDKYTFCCGVEVSKNDTLPTLICLNCVDRLTFAYQFKQQCLSSNDTLKECLEEFKQSSAAASATKASKVVDVETITIKQENGLLLQYELPVEHDPQVQWSRASSTRHSSKSKKRGRPRKYVDEQGLSLYRRKKAKQSKEKDPEELTTMITNATIDMKEEPVDEEEPFGGDFADNDPDYAPDDIDEKIETEAEVEPEKSSPPKKRGRRRKSESKSKPKETVKEDDGEDVLLKETILAFSEPIPEHILNPKPKKRYTSSKKKYVYEKTHTCETCGTSFTSNSALQTHIRRHLGIKPFVCSVCGFACVMKEPLKRHMLRHTGERPYKCRICERRFGDYGTRQKHERLHMGIRPYQCTLCGKSFTYSYVLANHMLTHTGEKKYSCGPCNKKFTKAHHLKYHNKVHHKELYMQQQMELEAKRMRQQMNITSLGGVAGQVIDGSLQLIQTTDDAEETQMQIVQDDDKETNRAVAGMQGVVLDNDFCIQDE

Uniprot

H9JMG7 A0A2A4JFI7 A0A3S2NN54 A0A1E1WM26 A0A194PL42 A0A2H1VWM7 + More
S4PJZ7

Pubmed

19121390 26354079 23622113

EMBL

BABH01016826 NWSH01001646 PCG70579.1 RSAL01000221 RVE44067.1 GDQN01003077 + More
JAT87977.1 KQ459601 KPI93718.1 ODYU01004853 SOQ45156.1 GAIX01004750 JAA87810.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000053268

PRIDE

H9JMG7

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF02178   AT_hook

Interpro

IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf
IPR013087   Znf_C2H2_type
IPR017956   AT_hook_DNA-bd_motif

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9JMG7 A0A2A4JFI7 A0A3S2NN54 A0A1E1WM26 A0A194PL42 A0A2H1VWM7 + More
S4PJZ7

PDB

2I13 E-value=2.00483e-26, Score=297

KEGG

101741184 no KO assigned | (RefSeq) zinc finger protein 391-like

GO

GO:0005634 GO:0008270 GO:0003676 GO:0003677 GO:0046872 GO:0030126 GO:0030117 GO:0006418 GO:0003707 GO:0006281 GO:0006259

Length:

513

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02718

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.00675

outside

1 - 513

Pi

253.230584

Theta

187.661142

Tajima's D

0.894008

CLR

0.062112

CSRT

0.635568221588921

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree