Silkworm Genome Informatics Database

Gene

KWMTBOMO15601

Pre Gene Modal

BGIBMGA010721

Annotation

PREDICTED:_zinc_finger_protein_391-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr26(-):3872784-3876008 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.236 Nuclear Reliability : 1.517

CDS

ATGGAGCTCGAGGCTAAGAGGACGAGACAGCAGATGAACATCAGCGGCCTCTCGGAGGTGCTGTCAGGGAAGATTGTCGATGGGAAACTGCTCATCTCTGGGAACTCGCTGAACGAAGGTCAAGAGACGCTGATCATTGAGGAGGAGAACGTCGACGGAGACATCAAGGAGACCGGACGAGCGGTCGCCGACATGCAGGTCGTGTTGGACGAAGACTTTTATTTAGAACAAACAAATTAG

Protein

MELEAKRTRQQMNISGLSEVLSGKIVDGKLLISGNSLNEGQETLIIEEENVDGDIKETGRAVADMQVVLDEDFYLEQTN

Uniprot

H9JMG8 A0A2H1VWM7 A0A2A4JFI7 A0A3S2NN54 H9JMG7 A0A194PL42 + More
A0A1E1WM26 A0A212EYK4 S4PJZ7

Pubmed

19121390 26354079 22118469 23622113

EMBL

BABH01016826 ODYU01004853 SOQ45156.1 NWSH01001646 PCG70579.1 RSAL01000221 + More
RVE44067.1 KQ459601 KPI93718.1 GDQN01003077 JAT87977.1 AGBW02011486 OWR46572.1 GAIX01004750 JAA87810.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000053268 UP000007151

PRIDE

H9JMG8 H9JMG7

Pfam

PF00096   zf-C2H2        + More
PF02178   AT_hook
PF07776   zf-AD

Interpro

IPR039705   REPIN1        + More
IPR036236   Znf_C2H2_sf
IPR013087   Znf_C2H2_type
IPR017956   AT_hook_DNA-bd_motif
IPR012934   Znf_AD

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

H9JMG8 A0A2H1VWM7 A0A2A4JFI7 A0A3S2NN54 H9JMG7 A0A194PL42 + More
A0A1E1WM26 A0A212EYK4 S4PJZ7

KEGG

101741034 no KO assigned | (RefSeq) zinc finger protein 391-like

GO

GO:0003676 GO:0008270 GO:0003677 GO:0005634

PANTHER

PTHR24406:SF10

Length:

79

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00152

Exp number, first 60 AAs:

0.00152

Total prob of N-in:

0.64289

inside

1 - 79

Pi

217.711499

Theta

151.072745

Tajima's D

1.633301

CLR

0

CSRT

0.814809259537023

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics