SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15597
Pre Gene Modal
BGIBMGA010832
Annotation
PREDICTED:_homeobox_protein_slou_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.237 Nuclear   Reliability : 1.351
 

Sequence

CDS
ATGCTCGCTATGGCTCGGGGATCAGAGGATCGTAGGGTTGAAGGGCAAGCGGAGAGCGAGCCTGAAGCTGAGGCGAACGGAGAAGTGGACGTCGTGGGGGTGGAAGAGGCCGCGCCTGTCGACTTGACACGACGCTTGGGCCTCACCAGACCTCCGGAGAGACCAGCGATAGCGTTTTCCGTCGAGAACATTCTAGACCCCAACAAGTTCACGGGAAGGACGGAGGGTACATTGAGATATGACGACCAATACTGGAGACAGCAGTACGACAGGGAGGACAGTGATTCAGTCGACCTGGTAGAAACACGCTGTTCTATAAAATAA
Protein
MLAMARGSEDRRVEGQAESEPEAEANGEVDVVGVEEAAPVDLTRRLGLTRPPERPAIAFSVENILDPNKFTGRTEGTLRYDDQYWRQQYDREDSDSVDLVETRCSIK

Summary

Pfam
PF00046   Homeodomain
Interpro
IPR020479   Homeobox_metazoa        + More
IPR009057   Homeobox-like_sf       
IPR001356   Homeobox_dom       
IPR017970   Homeobox_CS       
SUPFAM
SSF46689   SSF46689       

Ontologies

Topology

Subcellular location
Nucleus  
Length:
107
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.20294
outside
1  -  107
 
 

Population Genetic Test Statistics

Pi
245.721082
Theta
174.404891
Tajima's D
1.265728
CLR
0
CSRT
0.72296385180741
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号