Gene

KWMTBOMO15582

Pre Gene Modal

BGIBMGA010826

Annotation

PREDICTED:_ABC_transporter_G_family_member_23-like_[Bombyx_mori]

Location

Bomo_Chr26(+):3321805-3381599      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.543

CDS

ATGGCGGTCCGAGAAGCAGCAGTTATCGTAGAGTGTGCCAACAAGTCATATGGACAACAGAACGTGCTCAACGACCTAGACTTGACCGTCGAAAAGGGCACTATATATGGGCTGCTTGGTCCGTCGGGCTGTGGGAAAACGACGTTGCTCTCCTGCATAGTCGGAAGACGGAGCCTTGATAGTGGCAATGTCTGGGTGCTTGGTGGGAAGCCAGGAGAGAAGGGCAGCGGTGTGCCTGGCCCCAGAGTGGGATATATGCCGCAGGACATAGCTTTAGTTGGAGAGTTCACGGTCAGAGATGCTGTATACTACTTCGGTCGCATATACGGCATGGAGCATAAGAAGATGACGGAGCGCTTTGAGTTCCTCAGCTCGTTACTGGACCTGCCCAGTGGGAATCGACTCATTAAAAATTGCTCCGGAGGGCAGCAACGAAGAGTCTCGTTGGCAGCTGCTTTAGTCCACGACCCAGAGCTGTTAATCTTAGACGAACCGACGGTTGGATTGGACCCTGTATTGAGGGAGCAAATCTGGAAGTTCCTGACTGATGTCGCACAGCAGGGGACCACGGTTATCATCACAACGCACTATATCGATGAAACAAAACAAGCGCACAAGATAGGCTTACTGCGAGATGGACAGTTGCTGGCGGAAGATTCTCCAGATGAAATTCTGAGAAAGTTCGAGTGCAATACCCTTGAGGAGGCCTTTCTTAAGCTTGCCTTAGCTCAATATGAAATTCCACAACGAAGACCCCCACCGACAGTGTCTCCGGACGTGATCCCGGAAAGCAGACAGATCGAGAGCGTGTACGAGTCAAGGGAAACCTTCAATGCCGTGAACGGGAGCACTGATGTTTTAACAAAGAAAGAAAAGTCGATAAGGAGCAGAAATTTGTCAAGGTCCAGATACAAAGCCGTATTTATTAAGTGCATACAACAATTCTGTAGACATCCTGGGGGCCTAATATTCTCTATACTGTTTCCTATAATCGAGGTGGTCGCGTTCTTCCTGGCGGTGGGACACGACCCGAGGGACCTCCAGATCGCAGTCGTCAATGAAGAGGCGGTCTTCTCGCCGTTTGGCTTAGATATCTGTAGGAGAAGTGACTTACAAACGACAAAGTTGTTAAAGGACGGCACGTGTGAACTGTACATGCTGGGCTGCTGGTTCCTAGAAGAAATGGAGAACAAGGAATTGGTTCAGACGGTGTATAACAGTACTGAGGAGGCGAAAAGCGCCGTGGCAACTGGCAAGCTCTACGCCGCCCTCCACTTCGCTCAGAACTTCAGTGAGGCACTCGGGTTGCGGGTCGCTGAGGGAGAAGTCGCGGACCGCACGCTCGCCGAGAGCAACATCAGGGTCTGGCTCGACATGACCAATCACCAAATATCATATTTCATAAAGCAGCAGCTACACAAAGCTTACGAGAGCTTCACAAAGCGCGTGATGAGAGCTTGCGACAGACCCGAAAACATCATACAGATTCCGGTCAACTTCCACGATCCGATCTACGGTAAGAAGGAGCCGGAAATGGTTGGATACATGGCTCCCGGCATCTTGATCACGATAATATTCTTCCTGCCGAGCGTGGTGACGTCGACGCTGATGATCGGCGACCGGCTGGAGGGCGTGTGGGAGCGCAGCGCCGTGGCGGGCGTGCGGCCGCGCGAGATGCTCAACGTGCACATCGCGCTGCAGTCCGTCGTCATAGTGGTGCAGACAATCGAGATGATGGTGTTAGCGTTCGCTGGTTACGGTATACCGTCTAGGGGTTCCAATATCACGTGCGGGATCCTCCTGTTCCTCCAGGGTCTGTCGGGGATGTGCTACGGGTTCCTTCTGTCAGTCTACTGCACCAGTCACACGATGGCGTTCTTCGTTGCCACTGGAAGTTTCTATCCTATGATACTACTCTGCGGAATATTATGGCCCCTAGAAGGCATGTCTGGGGGGCTACGATACTTCGCGCTGGCCCTACCATTTACGATACCATCGAATTCCCTTCGAGATATGTTCGAGAAGGGAGCTTCTATCACCGACTCTACAGTTTATAACGGCTTCTTAGTCACATTTCTGTGGATATTCATCACTTTAGGCTTGATATTGTTACGATTGAAATATAAGAAAACTTAA

Protein

MAVREAAVIVECANKSYGQQNVLNDLDLTVEKGTIYGLLGPSGCGKTTLLSCIVGRRSLDSGNVWVLGGKPGEKGSGVPGPRVGYMPQDIALVGEFTVRDAVYYFGRIYGMEHKKMTERFEFLSSLLDLPSGNRLIKNCSGGQQRRVSLAAALVHDPELLILDEPTVGLDPVLREQIWKFLTDVAQQGTTVIITTHYIDETKQAHKIGLLRDGQLLAEDSPDEILRKFECNTLEEAFLKLALAQYEIPQRRPPPTVSPDVIPESRQIESVYESRETFNAVNGSTDVLTKKEKSIRSRNLSRSRYKAVFIKCIQQFCRHPGGLIFSILFPIIEVVAFFLAVGHDPRDLQIAVVNEEAVFSPFGLDICRRSDLQTTKLLKDGTCELYMLGCWFLEEMENKELVQTVYNSTEEAKSAVATGKLYAALHFAQNFSEALGLRVAEGEVADRTLAESNIRVWLDMTNHQISYFIKQQLHKAYESFTKRVMRACDRPENIIQIPVNFHDPIYGKKEPEMVGYMAPGILITIIFFLPSVVTSTLMIGDRLEGVWERSAVAGVRPREMLNVHIALQSVVIVVQTIEMMVLAFAGYGIPSRGSNITCGILLFLQGLSGMCYGFLLSVYCTSHTMAFFVATGSFYPMILLCGILWPLEGMSGGLRYFALALPFTIPSNSLRDMFEKGASITDSTVYNGFLVTFLWIFITLGLILLRLKYKKT

Uniprot

A0A0N1PG95   A0A212F4L4   A0A2A4JSP6   A0A194RQ20   A0A1L8DEW7   A0A1L8DF67   + More
A0A1B0D2N6   A0A195CTG2   A0A182JPM5   A0A182P559   A0A182X0C0   A0A158NZH0   A0A182U3I1   A0A182R677   A0A182YAQ4   A0A2M3Z376   A0A182QE61   A0A182N442   A0A1J1IM12   A0A151WEU3   A0A1B0CGT5   A0A0K8TRC9   A0A182J8X7   Q7PYQ4   A0A067R2A0   A0A182FSU0   A0A182LV52   F4WLA0   A0A182VZ62   K7INT0   A0A1W4WF93   A0A139WBS7   W5J5L5   A0A139WBU4   A0A232FC36   A0A0L7QYQ1   K7J6H5   A0A1I8QDG6   A0A0U9HSE9   W8BBX8   A0A0K8VH42   A0A0A1XF64   A0A034WIK2   A0A0L0BZA0   A0A084VG16   A0A1B6DBU3   T1P8Q9   Q16GC7   D6X0P2   W8B731   W8AIT3   A0A034VCZ0   A0A3R5VSJ0   A0A0K8UCG2   A0A195CRZ4   A0A0L0CHB5   A0A1A9X055   A0A2H8TU48   A0A0G3FE97   A0A0A1XFV5   A0A1A9YT18   A0A0A1XDD6   E2BHE9   A0A1B0B3C6   J9K0F0   A0A1A9ZZ65   E0VTJ3   A0A2W1BZQ6   A0A151IYL4   A0A2A4JA19   A0A1I8PDS1   T1PDS1   A0A0N1INK1   A0A2H4TEV3   A0A1A9VFR8   V9IML8   E0VTI8   A0A0C9R7B6   A0A1Q3G4A7   A0A195CRT1   B4MV32   A0A2A3E0L0   A0A0M8ZZM1   F4WL98   A0A3B0JVB2   A0A154PSW7   E9J737   F4WL95   A0A151WUX0   A0A151JF56   F4WL93   A0A1B0A3U4   B3MML8   E2BHE8   A0A026WE32   A0A310SQQ1   B4JC64  

Pubmed

26354079    22118469    21347285    25244985    26369729    12364791    + More
24845553    21719571    20075255    18362917    19820115    20920257    23761445    28648823    24495485    25830018    25348373    26108605    24438588    25315136    17510324    29121518    20798317    20566863    28756777    17994087    21282665    18057021    24508170   

EMBL

KQ459078    KPJ03813.1    AGBW02010341    OWR48685.1    NWSH01000718    PCG74634.1    + More
KQ459875    KPJ19597.1    GFDF01009085    JAV04999.1    GFDF01009100    JAV04984.1    AJVK01010728    AJVK01010729    KQ977349    KYN03409.1    ADTU01004604    ADTU01004605    ADTU01004606    GGFM01002147    MBW22898.1    AXCN02000024    CVRI01000055    CRL01200.1    KQ983238    KYQ46378.1    AJWK01011577    AJWK01011578    GDAI01000915    JAI16688.1    AAAB01008987    EAA01628.5    KK852806    KDR16091.1    AXCM01009254    GL888207    EGI65063.1    KQ971372    KYB25372.1    ADMH02002125    ETN58688.1    KYB25373.1    NNAY01000487    OXU28050.1    KQ414688    KOC63687.1    GARF01000045    JAC88903.1    GAMC01012082    JAB94473.1    GDHF01014132    JAI38182.1    GBXI01004707    JAD09585.1    GAKP01004984    GAKP01004982    JAC53970.1    JRES01001211    KNC24559.1    ATLV01012595    ATLV01012596    ATLV01012597    KE524806    KFB36910.1    GEDC01014139    JAS23159.1    KA645057    AFP59686.1    CH478294    EAT33290.1    KQ971371    EFA09999.1    GAMC01020936    JAB85619.1    GAMC01020938    JAB85617.1    KY849646    GAKP01018588    ATY74526.1    JAC40364.1    MH172531    QAA95938.1    GDHF01033733    GDHF01027985    JAI18581.1    JAI24329.1    KYN03410.1    JRES01000409    KNC31602.1    GFXV01005297    MBW17102.1    KP343867    AKJ85499.1    GBXI01004445    JAD09847.1    GBXI01005315    JAD08977.1    GL448287    EFN84918.1    JXJN01007808    ABLF02035201    ABLF02035202    DS235767    EEB16720.1    KZ149908    PZC78206.1    KQ980746    KYN13643.1    NWSH01002444    PCG68290.1    KA646285    AFP60914.1    KQ461003    KPJ10017.1    MF139835    ATY74536.1    JR052559    AEY61724.1    EEB16715.1    GBYB01008687    JAG78454.1    GFDL01000449    JAV34596.1    KYN03411.1    CH963857    EDW76377.1    KZ288474    PBC25293.1    KQ435812    KOX72863.1    EGI65061.1    OUUW01000010    SPP86037.1    KQ435180    KZC14992.1    GL768421    EFZ11364.1    EGI65058.1    KQ982717    KYQ51719.1    KQ979021    KYN24358.1    EGI65056.1    CH902620    EDV31909.1    KPU73697.1    EFN84917.1    KK107293    EZA53289.1    KQ760176    OAD61646.1    CH916368    EDW03077.1   

Proteomes

UP000053268    UP000007151    UP000218220    UP000053240    UP000092462    UP000078542    + More
UP000075881    UP000075885    UP000076407    UP000005205    UP000075902    UP000075900    UP000076408    UP000075886    UP000075884    UP000183832    UP000075809    UP000092461    UP000075880    UP000007062    UP000027135    UP000069272    UP000075883    UP000007755    UP000075920    UP000002358    UP000192223    UP000007266    UP000000673    UP000215335    UP000053825    UP000095300    UP000037069    UP000030765    UP000095301    UP000008820    UP000091820    UP000092443    UP000008237    UP000092460    UP000007819    UP000092445    UP000009046    UP000078492    UP000078200    UP000007798    UP000242457    UP000053105    UP000268350    UP000076502    UP000007801    UP000053097    UP000001070   

Pfam

PF00005   ABC_tran        + More
PF00995   Sec1
PF01061   ABC2_membrane

Interpro

IPR027417   P-loop_NTPase        + More
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR003593   AAA+_ATPase       
IPR000412   ABC_2_transport       
IPR027482   Sec-1-like_dom2       
IPR036045   Sec1-like_sf       
IPR001619   Sec1-like       
IPR013525   ABC_2_trans       
IPR000515   MetI-like       

SUPFAM

SSF52540   SSF52540        + More
SSF56815   SSF56815       

Gene 3D

3.40.50.1910    

CDD

cd06261  TM_PBP2

ProteinModelPortal

A0A0N1PG95   A0A212F4L4   A0A2A4JSP6   A0A194RQ20   A0A1L8DEW7   A0A1L8DF67   + More
A0A1B0D2N6   A0A195CTG2   A0A182JPM5   A0A182P559   A0A182X0C0   A0A158NZH0   A0A182U3I1   A0A182R677   A0A182YAQ4   A0A2M3Z376   A0A182QE61   A0A182N442   A0A1J1IM12   A0A151WEU3   A0A1B0CGT5   A0A0K8TRC9   A0A182J8X7   Q7PYQ4   A0A067R2A0   A0A182FSU0   A0A182LV52   F4WLA0   A0A182VZ62   K7INT0   A0A1W4WF93   A0A139WBS7   W5J5L5   A0A139WBU4   A0A232FC36   A0A0L7QYQ1   K7J6H5   A0A1I8QDG6   A0A0U9HSE9   W8BBX8   A0A0K8VH42   A0A0A1XF64   A0A034WIK2   A0A0L0BZA0   A0A084VG16   A0A1B6DBU3   T1P8Q9   Q16GC7   D6X0P2   W8B731   W8AIT3   A0A034VCZ0   A0A3R5VSJ0   A0A0K8UCG2   A0A195CRZ4   A0A0L0CHB5   A0A1A9X055   A0A2H8TU48   A0A0G3FE97   A0A0A1XFV5   A0A1A9YT18   A0A0A1XDD6   E2BHE9   A0A1B0B3C6   J9K0F0   A0A1A9ZZ65   E0VTJ3   A0A2W1BZQ6   A0A151IYL4   A0A2A4JA19   A0A1I8PDS1   T1PDS1   A0A0N1INK1   A0A2H4TEV3   A0A1A9VFR8   V9IML8   E0VTI8   A0A0C9R7B6   A0A1Q3G4A7   A0A195CRT1   B4MV32   A0A2A3E0L0   A0A0M8ZZM1   F4WL98   A0A3B0JVB2   A0A154PSW7   E9J737   F4WL95   A0A151WUX0   A0A151JF56   F4WL93   A0A1B0A3U4   B3MML8   E2BHE8   A0A026WE32   A0A310SQQ1   B4JC64  

PDB

4YER     E-value=7.17849e-31,     Score=337

KEGG

101737884    no KO assigned | (RefSeq) ABC transporter G family member 23-like

GO

GO:0016021   GO:0005524   GO:0016887   GO:0055085   GO:0043190   GO:0006904   GO:0015408   GO:0022857   GO:0007165   GO:0006418   GO:0003707   GO:0006281   GO:0006259  

Length:

711

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

133.34662

Exp number, first 60 AAs:

0.17498

Total prob of N-in:

0.50619

outside

1  -  516

TMhelix

517  -  539

inside

540  -  559

TMhelix

560  -  582

outside

583  -  594

TMhelix

595  -  617

inside

618  -  623

TMhelix

624  -  646

outside

647  -  681

TMhelix

682  -  704

inside

705  -  711

 

 

Pi

188.507165

Theta

153.155434

Tajima's D

0.317218

CLR

0.361732

CSRT

0.463276836158192

Interpretation

Uncertain