Gene

KWMTBOMO15581

Pre Gene Modal

BGIBMGA010726

Annotation

PREDICTED:_ABC_transporter_G_family_member_20_[Papilio_polytes]

Location

Bomo_Chr26(-):3222654-3308844      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.634

CDS

ATGCCAGCTTACGACAATGAAGGAGCCACGATATCCATGGAGGACGTCCGGGAAATCGACCGTCCAATCACCATTAGCACCATAGAAGAAGAGCTAATAGCCAGAAGAAACAGAATGTTCAAAACTCAAAAGTCCACAGTTGCTTCTAGGAGGCAGCAAGCGGTGTGTGTCAGACGAGCGCACAAAAGATATGGAACAGCTAAAAACCCTAACGTTATTTTGGATGGTCTGAATATGACTGTTGCTAAAGGATCTATATATGGCCTTTTGGGTGCTTCTGGCTGCGGCAAGACCACACTGCTGTCGTGTATAGTCGGCAGACGAAGACTAAATTCTGGTGAGATCTGGGTGCTGGGTGGAAAGCCCGGAAGCCCTGGCAGTGGAGTCCCTGGGCCTAGAATAGGATATATGCCACAGGAAGTCGCGCTCTTCGGCGAATTTTCGATCAGAGAAACACTAATATATTTCGGTTGGATCGCGAACATGTCCACTCCACAAGTAGAAGAACGAATAGACTTCCTCATCAAGTTATTGCAGTTACCTAATCCTACAAGACAAGTCAAAAATTTATCTGGGGGACAACAAAGAAGGACTTCTTTAGCCGCTGCCCTTATTCACGATCCTGAGCTGCTTATCCTGGACGAGCCTACAGTTGGAGTGGATCCTGTGCTCAGACAAAGCATCTGGGATCATCTCGTGGATATAACAAAGGAAGGTCGGACAACAGTGATCATAACTACTCATTACATCGACGAAACAAAACAAGCTAACATGATTGGCCTTATGCGAGGCGGTAGATTTTTGGCTGAAGAGTCTCCGAGCGAGTTGATCAGCCGCTACAACGCCGAAAGCCTTGAAGAAGTGTTCCTGAAGCTGTCAGTGCTACAGAATCTAGGCAAGCGCCGAAGATCTAGCATTCTCGCTGATGTCGTTGAAAAAGTTGAGCTTCCTACTATGCCTGATCCATCAGCCATAGATTTGGAGGAAGCAGAAGTAGGAGAGATTTCCGGAGAGTTCGGTGACAACGTCTCGATGAGCAGTAAAGGAAGGGTTGTAGTGGCACCGGACCTACCAATTCCAGTAGAAGCTATACCCCCTGAAGAGAAACCGAAGAGGACAAAAATGGAAATGATCATGCCAATGAAATGGCATCACATGAAAGCTCTAATATGGAAGAACTTCTGGAGTCTATTTAGGAACTTTGGTGTATTAGCGTTCATAATGGGCTTACCGATATCGCAAATGGTCTTATTCTGCCTCGCTATCGGTCATTATCCTGTTGGTCTTCCCATAGCGGTTGTGAATTACGAGTCTCACAGCAGCGATCCGTTGTGTTATTATGACCAGAAGAAATGCCCTCAAGACCGCAGCACGTACGATTGGCATTTGACGAACTTTAGCTGCCGTTATTTGGATTTCCTATCGAAGCGGCAGAGCAATCTGATCCTGTACCCCAACACTGAAGAAGCCATGTCGGAAGCAGCCCACGGCAAAGCCAGGGTCGTTCTGGTGTTCCCTGCCAATTTCTCAACTTGTCTTCAAGAAAGAATCACGAATCCACGCCGCACAGATGACTACACTATTATGAATTCCGATGTAGAGATCCACATGGATAATACAGATAAACAAGTCGAATGGATGTTGAGTCGCGATCTGCAGCTTGCGTTCATGGACGCTACACAGGAGCTGGCGAAGATCTGTCAGCTACCCTCGAGAATGATGTCCATTCCGGTGCACTTCAATGAGCCTATCTATGGTCTAGATGAGGCCAACTTCACCGATTTTGCTGGACCGGGAGTAATATTAACTATCATATTTTTCTTGGCGGTGGCTTTGACTTCAGGGTCTATGCTGGCTGAAAGAAATGAAGGCATCCTTGAAAGGACTCTAGTTTCAGGAATCACTGGTACAGAGATTCTGTTCTCACACGTCACGGTACAAATGCTGGTGATGATAGCCCAGTCGGTCATTGTCTTGGTCATCGGCTTCGTGTTCTTTGGACTCACGATGAGAGGTCCTATTGGATGGGTCACATTCCTCACACTGATCACTGGATTGTGTGGAATGACTTTTGGTTTCGTCGTGTCCTGTGTTTGTGACACCGACAGAACAGCTACTTACCTGGCTCTTGGCTCGTTCCTGCCGATGGTGTTACTTTGCGGCATCATATGGCCCGTTGAAGGTATGCACCTGATTCTACAGTGGATCAGCTACATTCTTCCGCTTACGAAATCTACAGAGTCTCTCAGATCGATGCTACAGAGAGGTTGGACTATCAATGTACCCACTGTCTACTCTGGATTCATATCAACCGGAATTTGGATAGCTATTTATTTGACCACAAGTATTTTACTACTTAAATTTAAGAAAGGCTAA

Protein

MPAYDNEGATISMEDVREIDRPITISTIEEELIARRNRMFKTQKSTVASRRQQAVCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGKPGSPGSGVPGPRIGYMPQEVALFGEFSIRETLIYFGWIANMSTPQVEERIDFLIKLLQLPNPTRQVKNLSGGQQRRTSLAAALIHDPELLILDEPTVGVDPVLRQSIWDHLVDITKEGRTTVIITTHYIDETKQANMIGLMRGGRFLAEESPSELISRYNAESLEEVFLKLSVLQNLGKRRRSSILADVVEKVELPTMPDPSAIDLEEAEVGEISGEFGDNVSMSSKGRVVVAPDLPIPVEAIPPEEKPKRTKMEMIMPMKWHHMKALIWKNFWSLFRNFGVLAFIMGLPISQMVLFCLAIGHYPVGLPIAVVNYESHSSDPLCYYDQKKCPQDRSTYDWHLTNFSCRYLDFLSKRQSNLILYPNTEEAMSEAAHGKARVVLVFPANFSTCLQERITNPRRTDDYTIMNSDVEIHMDNTDKQVEWMLSRDLQLAFMDATQELAKICQLPSRMMSIPVHFNEPIYGLDEANFTDFAGPGVILTIIFFLAVALTSGSMLAERNEGILERTLVSGITGTEILFSHVTVQMLVMIAQSVIVLVIGFVFFGLTMRGPIGWVTFLTLITGLCGMTFGFVVSCVCDTDRTATYLALGSFLPMVLLCGIIWPVEGMHLILQWISYILPLTKSTESLRSMLQRGWTINVPTVYSGFISTGIWIAIYLTTSILLLKFKKG

Uniprot

H9JMH3   A0A2H1V7V2   A0A0N1IMY5   A0A0N1IQR3   A0A212F4U8   A0A182JL24   + More
W5JPR1   A0A084WUS8   A0A182FPA4   A0A2M4BEJ1   A0A182P3S9   A0A2M4AFI7   A0A182QMX6   A0A182Y6M8   A0A182M5B0   A0A182LEG1   Q7QCI0   A0A182HSF4   A0A182UF67   A0A182V3M4   A0A182XAL3   A0A182RQH9   A0A182W0R8   A0A182K5K8   A0A1S4FAP5   Q179W7   A0A023EW46   A0A182NRC8   A0A1J1IC19   A0A1Q3FPY4   A0A1I8PN83   D6X2Z9   T1PHQ0   A0A0L0CB18   A0A0K8UA84   B3P683   B4PSU8   A0A0A1X0R1   B5DVI8   B4GED2   Q86P18   W8AXS4   B3N1L9   B4NKQ9   A0A3B0JM23   A0A0M4F3C0   B4QW42   B4LYD6   A0A2H8TVP8   A0A3R5SLG5   A0A1L8DDG1   E2BHE8   A0A151JF56   B4KAL2   A0A151WUX0   A0A1W4VLH2   A0A154PSW7   B4ICL0   A0A310SQQ1   A0A195FCD0   A0A0L7QLD0   F4WL93   A0A336MFA5   A0A1B6LIH2   A0A195BMU2   A0A026WE32   A0A1B6DVQ2   A0A151I6F8   J9K0T3   A0A232FG17   A0A0J7KE16   N6UEZ5   J3JUX4   V9IML8   A0A1B6GX14   A0A1B0GF05   A0A0K8TMQ7   A0A1B0GF04   A0A2A3E0L0   A0A0C9R254   A0A0M8ZZM1   B0WZM5   A0A0K8S4N7   A0A146LDF7   A0A161ANH5   A0A1Y1KEG6   A0A0A9Z6F2   E2AB08   A0A2J7PYS4   A0A069DWS8   A0A023F3A5   A0A0V0G456   A0A3L8DRF1   A0A0L7LKY8   A0A224X869   A0A0A9YYT0   A0A067QZX9   A0A182H1D3   A0A139WBU4  

Pubmed

19121390    26354079    22118469    20920257    23761445    24438588    + More
25244985    20966253    12364791    14747013    17210077    17510324    24945155    18362917    19820115    25315136    26108605    17994087    17550304    25830018    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    20798317    21719571    24508170    28648823    23537049    22516182    26369729    26823975    28004739    25401762    26334808    25474469    30249741    26227816    24845553    26483478   

EMBL

BABH01016791    BABH01016792    ODYU01001121    SOQ36891.1    KQ459078    KPJ03812.1    + More
LADJ01026996    KPJ21158.1    AGBW02010306    OWR48761.1    ADMH02000693    ETN65298.1    ATLV01027119    KE525423    KFB53972.1    GGFJ01002329    MBW51470.1    GGFK01006087    MBW39408.1    AXCN02001466    AXCM01000158    AAAB01008859    EAA08206.4    APCN01000271    CH477344    EAT43031.1    GAPW01000262    JAC13336.1    CVRI01000047    CRK97747.1    GFDL01005512    JAV29533.1    KQ971372    EFA10297.1    KA647650    AFP62279.1    JRES01000664    KNC29441.1    GDHF01028806    JAI23508.1    CH954182    EDV53553.1    CM000160    EDW98635.1    GBXI01010069    GBXI01008924    GBXI01007441    GBXI01000817    JAD04223.1    JAD05368.1    JAD06851.1    JAD13475.1    CM000070    EDY68204.2    CH479182    EDW33967.1    BT003531    AE014297    AAO39535.1    ABC66191.1    GAMC01012770    GAMC01012769    JAB93785.1    CH902661    EDV33988.1    CH964272    EDW84120.1    OUUW01000007    SPP83285.1    CP012526    ALC45695.1    CM000364    EDX14541.1    CH940650    EDW66932.1    GFXV01006502    MBW18307.1    MH172535    QAA95942.1    GFDF01009575    JAV04509.1    GL448287    EFN84917.1    KQ979021    KYN24358.1    CH933806    EDW15725.2    KQ982717    KYQ51719.1    KQ435180    KZC14992.1    CH480828    EDW45106.1    KQ760176    OAD61646.1    KQ981685    KYN38051.1    KQ414915    KOC59442.1    GL888207    EGI65056.1    UFQT01000937    SSX28081.1    GEBQ01016518    JAT23459.1    KQ976433    KYM87308.1    KK107293    EZA53289.1    GEDC01007530    JAS29768.1    KQ978473    KYM93686.1    ABLF02033861    NNAY01000251    OXU29694.1    LBMM01009052    KMQ88436.1    APGK01029562    KB740735    KB632302    ENN79196.1    ERL91767.1    BT127039    AEE62001.1    JR052559    AEY61724.1    GECZ01002834    JAS66935.1    CCAG010012701    CCAG010012702    CCAG010012703    GDAI01001971    JAI15632.1    KZ288474    PBC25293.1    GBYB01000940    GBYB01000941    JAG70707.1    JAG70708.1    KQ435812    KOX72863.1    DS232211    EDS37539.1    GBRD01017619    JAG48208.1    GDHC01012408    JAQ06221.1    KF828807    AIN44124.1    GEZM01086010    JAV59839.1    GBHO01006224    JAG37380.1    GL438234    EFN69284.1    NEVH01020342    PNF21462.1    GBGD01000603    JAC88286.1    GBBI01002817    JAC15895.1    GECL01003381    JAP02743.1    QOIP01000005    RLU22987.1    JTDY01000691    KOB76203.1    GFTR01007880    JAW08546.1    GBHO01006230    JAG37374.1    KK852806    KDR16094.1    JXUM01003433    KQ560158    KXJ84121.1    KYB25373.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000075880    UP000000673    + More
UP000030765    UP000069272    UP000075885    UP000075886    UP000076408    UP000075883    UP000075882    UP000007062    UP000075840    UP000075902    UP000075903    UP000076407    UP000075900    UP000075920    UP000075881    UP000008820    UP000075884    UP000183832    UP000095300    UP000007266    UP000095301    UP000037069    UP000008711    UP000002282    UP000001819    UP000008744    UP000000803    UP000007801    UP000007798    UP000268350    UP000092553    UP000000304    UP000008792    UP000008237    UP000078492    UP000009192    UP000075809    UP000192221    UP000076502    UP000001292    UP000078541    UP000053825    UP000007755    UP000078540    UP000053097    UP000078542    UP000007819    UP000215335    UP000036403    UP000019118    UP000030742    UP000092444    UP000242457    UP000053105    UP000002320    UP000000311    UP000235965    UP000279307    UP000037510    UP000027135    UP000069940    UP000249989   

PRIDE

H9JMH3    Q86P18   

Pfam

PF01061   ABC2_membrane        + More
PF00005   ABC_tran

Interpro

IPR003593   AAA+_ATPase        + More
IPR013525   ABC_2_trans       
IPR003439   ABC_transporter-like       
IPR027417   P-loop_NTPase       
IPR000412   ABC_2_transport       
IPR017871   ABC_transporter_CS       
IPR000515   MetI-like       

SUPFAM

SSF52540   SSF52540       

CDD

cd06261  TM_PBP2

ProteinModelPortal

H9JMH3   A0A2H1V7V2   A0A0N1IMY5   A0A0N1IQR3   A0A212F4U8   A0A182JL24   + More
W5JPR1   A0A084WUS8   A0A182FPA4   A0A2M4BEJ1   A0A182P3S9   A0A2M4AFI7   A0A182QMX6   A0A182Y6M8   A0A182M5B0   A0A182LEG1   Q7QCI0   A0A182HSF4   A0A182UF67   A0A182V3M4   A0A182XAL3   A0A182RQH9   A0A182W0R8   A0A182K5K8   A0A1S4FAP5   Q179W7   A0A023EW46   A0A182NRC8   A0A1J1IC19   A0A1Q3FPY4   A0A1I8PN83   D6X2Z9   T1PHQ0   A0A0L0CB18   A0A0K8UA84   B3P683   B4PSU8   A0A0A1X0R1   B5DVI8   B4GED2   Q86P18   W8AXS4   B3N1L9   B4NKQ9   A0A3B0JM23   A0A0M4F3C0   B4QW42   B4LYD6   A0A2H8TVP8   A0A3R5SLG5   A0A1L8DDG1   E2BHE8   A0A151JF56   B4KAL2   A0A151WUX0   A0A1W4VLH2   A0A154PSW7   B4ICL0   A0A310SQQ1   A0A195FCD0   A0A0L7QLD0   F4WL93   A0A336MFA5   A0A1B6LIH2   A0A195BMU2   A0A026WE32   A0A1B6DVQ2   A0A151I6F8   J9K0T3   A0A232FG17   A0A0J7KE16   N6UEZ5   J3JUX4   V9IML8   A0A1B6GX14   A0A1B0GF05   A0A0K8TMQ7   A0A1B0GF04   A0A2A3E0L0   A0A0C9R254   A0A0M8ZZM1   B0WZM5   A0A0K8S4N7   A0A146LDF7   A0A161ANH5   A0A1Y1KEG6   A0A0A9Z6F2   E2AB08   A0A2J7PYS4   A0A069DWS8   A0A023F3A5   A0A0V0G456   A0A3L8DRF1   A0A0L7LKY8   A0A224X869   A0A0A9YYT0   A0A067QZX9   A0A182H1D3   A0A139WBU4  

PDB

4YER     E-value=1.27885e-25,     Score=292

KEGG

101739337    no KO assigned | (RefSeq) ABC transporter G family member 23

GO

GO:0055085   GO:0016887   GO:0005524   GO:0043190   GO:0016021   GO:0006810   GO:0016020   GO:0022857   GO:0007165   GO:0006418   GO:0003707   GO:0006281   GO:0006259  

Length:

791

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

134.83892

Exp number, first 60 AAs:

0

Total prob of N-in:

0.35814

outside

1  -  595

TMhelix

596  -  618

inside

619  -  638

TMhelix

639  -  661

outside

662  -  675

TMhelix

676  -  698

inside

699  -  704

TMhelix

705  -  727

outside

728  -  763

TMhelix

764  -  786

inside

787  -  791

 

 

Pi

256.966313

Theta

23.738279

Tajima's D

0.043394

CLR

0.738173

CSRT

0.390530473476326

Interpretation

Uncertain