Gene

KWMTBOMO15580

Pre Gene Modal

BGIBMGA010823

Annotation

PREDICTED:_lysyl_oxidase_homolog_3_[Papilio_polytes]

Location

Bomo_Chr26(+):3209165-3221726      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.781

CDS

ATGAAAAAGCATCTAGTGTTTAATTCCACATTGCTGTTTGTAATGTTGATCGAATCTATTGGAGTTTCGGGCAAAGATTTGAGTGAAAATGAGCGGGCTGGCCGAGCGGCATTTGTTCAAAGACTATTGAATAAAAAAAAGTATTTGGAAGGGAGAGTGAAATTAGTTGGCGGGAATAAATATGAAGGCAACGTGTACATCTATCACGCCGGTCGTTGGGGAGCTATTTGTGACGACAGCTGGGATGATGCGGCAGCTCAAATCGTATGTCGCGTGTTCAACAGGACTGGTTTTGCTACTCACGGAGGGCAATACGGTGAAGCAAAAGAACAATTTTGGATGGATGACATGGTTTGTCAGGGTGATGAATCTTCACTGACCCAGTGCATATTCTCTGGCTGGGGTTCTTCAGACTGCACGCCTACTGAAGCAGCTGGAGTCAAATGCCGCAAACAAGAGACACATGTGCCATTAAATCTTTCCTCAAAGAAAAAAGCAGGAGTCCCACTACATGAAGTCTTAGATATTAGGTATACTAGTTTGAGACTAGTTGGCGGAAGAAATGCTCTGGAGGGCAGAGTGGAGATCTATCACAATAATTACTGGGGAAGCCTATGCCCAGACGGCTGGACGATCTATGAAGCTGCAGCTACCTGTCGCCATTTAGGCCTAGGATATGCGGAGCAAGCCCTACAGACGGATTATTTCGGAAGCTCAAAGATTGTTCTTAGCGGAGTGGAATGTCAAGGCAACGAGACGAACCTATTAATGTGTCGACATCAGAAATATGGCAACGTTACGTGCCCAGGGACAGTTGGTCACGTCGCAGCGGTAATATGTACCCAAAAATTGGCCGATTTGGAGCTTGACACTGCAGCCATAGAACACACCGCCCATTTACAAGACGTTCCAATGTACCAGCTCACTTGCGCTATGGAAGAAAACTGCTTGACGAAGTCAGCCTATGAGACGCAAAAAACCAACCCAAATTGGCAATATGAAAGCAGAAGGCTATTGCGTTTCACAGCAGCCTCTCTCAACATCGGAAACGATGAATTCAGGCCGTATTTACCGAAGCATTTGTGGCAATGGCATCTTTGTCATATGCACTACCACAGTATGGAAGTGTTTGCTACTTTCGATGTCTTCGATGCGTCAGGCCGAAGAGTCGCAGAAGGCCATAAAGCTTCGTTCTGCTTAGAGGATAACACGTGCATGCCTGGAGTGGAAAAAAAGTATTCCTGCAAGAACTATGGAGATCAAGGTGTTTCAGTGAACTGTTCGGATGTTTATCATTACAATATTGACTGTCAGTGGGTGGATGTGAGTGATGTGGAGCCAGGCGATTACACGTTAAAGGTGGCAGTGAACCCTCACGCGCGAATAGCAGAACAAAATTACCACAATAACGCGGCGTCTTGCAGACTGCGTCTTTCTGAACTCTATGCTGCAGTATACGGATGTAAACGCGAAAGGCCTTAG

Protein

MKKHLVFNSTLLFVMLIESIGVSGKDLSENERAGRAAFVQRLLNKKKYLEGRVKLVGGNKYEGNVYIYHAGRWGAICDDSWDDAAAQIVCRVFNRTGFATHGGQYGEAKEQFWMDDMVCQGDESSLTQCIFSGWGSSDCTPTEAAGVKCRKQETHVPLNLSSKKKAGVPLHEVLDIRYTSLRLVGGRNALEGRVEIYHNNYWGSLCPDGWTIYEAAATCRHLGLGYAEQALQTDYFGSSKIVLSGVECQGNETNLLMCRHQKYGNVTCPGTVGHVAAVICTQKLADLELDTAAIEHTAHLQDVPMYQLTCAMEENCLTKSAYETQKTNPNWQYESRRLLRFTAASLNIGNDEFRPYLPKHLWQWHLCHMHYHSMEVFATFDVFDASGRRVAEGHKASFCLEDNTCMPGVEKKYSCKNYGDQGVSVNCSDVYHYNIDCQWVDVSDVEPGDYTLKVAVNPHARIAEQNYHNNAASCRLRLSELYAAVYGCKRERP

Uniprot

H9JMS0   A0A0N1PI89   A0A0N1I3I6   A0A3S2NN45   A0A2H1V7S0   A0A2A4J826   + More
A0A212F4W5   A0A084W394   A0A182JJM3   A0A182N5M8   A0A182QRR0   A0A182YGH7   A0A182MNL6   A0A182W0I7   Q7QBA0   A0A182L7I8   A0A182I7X8   B4P8E9   B3MJ04   A0A182VAU7   A0A0L0CM11   A0A182RYI1   A0A182TK12   B3NN17   A0A182XIX9   A0A182F6N6   B4GHF6   A0A182P8X5   Q28XR1   T1PJI8   B4I7W2   A0A3L8DKP5   A0A1W4UZ01   A0A0J9U811   B4MS10   B4QGL0   A0A1I8MTI8   A0A195D5J7   E2BNK3   B0WJ73   E2AIQ3   A0A151WMF5   A0A3B0JP91   Q9W2C9   H0RNL9   A0A1Q3FPA5   A0A034WB96   A0A1A9Y7Y6   A0A1B0ARI1   F4WLF0   A0A1J1I5J6   A0A0M4E8C4   W5J9E1   Q9N9Y8   A0A2J7PI67   A0A1A9ZRG9   A0A026X3Y3   A0A1A9X3F4   A0A195FY20   B4J6A1   A0A034W761   A0A1I8PDV5   A0A158NVI9   A0A0A1WG43   A0A182H0M1   A0A154NVR5   B4LLQ2   W8C566   C5WLU2   V9IFH6   E9IWS9   B4KNS1   A0A1Y1MMJ8   D6X0V2   A0A0L7RJH8   A0A0J7L8M1   E0VBQ5   A0A0K8TZK6   A0A195BMZ9   A0A1A9VEE9   K7IM98   A0A087TCQ9   E9GHI3   A0A088ADF0   A0A195E561   A0A067R7D2   A0A0P5YL50   A0A0P5EIX5   A0A0N8AL55   A0A0P6AM69   T1E173   A0A0N0U4V5   A0A0N8E1K9   A0A147BK26   A0A0P5YQE2   A0A2H8TD94   N6TMA4   A0A0P5XQY5   A0A1W4XWS8   A0A2S2Q7B9  

Pubmed

19121390    26354079    22118469    24438588    25244985    12364791    + More
14747013    17210077    20966253    17994087    17550304    26108605    15632085    30249741    22936249    25315136    20798317    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25348373    21719571    20920257    23761445    12686136    15811848    24508170    21347285    25830018    26483478    24495485    21282665    28004739    18362917    19820115    20566863    20075255    21292972    24845553    29652888    23537049   

EMBL

BABH01016791    LADJ01026996    KPJ21157.1    KQ459078    KPJ03811.1    RSAL01000221    + More
RVE44046.1    ODYU01001122    SOQ36895.1    NWSH01002740    PCG67600.1    AGBW02010306    OWR48762.1    ATLV01019867    ATLV01019868    ATLV01019869    KE525281    KFB44688.1    AXCN02001159    AXCM01001728    AAAB01008880    EAA08587.1    APCN01002579    CM000158    EDW91189.1    CH902619    EDV37070.1    JRES01000195    KNC33373.1    CH954179    EDV55511.1    CH479183    EDW35926.1    CM000071    EAL26255.2    KA648093    AFP62722.1    CH480824    EDW56687.1    QOIP01000007    RLU20408.1    CM002911    KMY95660.1    CH963850    EDW74899.2    CM000362    EDX08129.1    KQ976870    KYN07714.1    GL449414    EFN82782.1    DS231956    EDS28963.1    GL439853    EFN66690.1    KQ982944    KYQ49049.1    OUUW01000001    SPP75419.1    AE013599    AAF46763.1    BT132941    AEW26265.1    GFDL01005729    JAV29316.1    GAKP01007542    JAC51410.1    JXJN01002447    GL888207    EGI65113.1    CVRI01000037    CRK93633.1    CP012524    ALC40946.1    ADMH02001794    ETN61077.1    AJ295626    CAB99481.1    NEVH01025129    PNF16040.1    KK107019    EZA62803.1    KQ981169    KYN45338.1    CH916367    EDW00874.1    GAKP01007541    JAC51411.1    ADTU01027213    GBXI01016626    JAC97665.1    JXUM01101570    JXUM01101571    JXUM01101572    JXUM01101573    KQ564658    KXJ71944.1    KQ434766    KZC03737.1    CH940648    EDW60915.1    GAMC01005074    JAC01482.1    BT088907    ACT09404.1    JR040656    AEY59226.1    GL766597    EFZ15003.1    CH933808    EDW10056.1    GEZM01030958    JAV85136.1    KQ971372    EFA10680.1    KQ414581    KOC71030.1    LBMM01000238    KMR03324.1    DS235035    EEB10811.1    GDHF01032400    JAI19914.1    KQ976433    KYM87355.1    KK114620    KFM62898.1    GL732545    EFX81056.1    KQ979657    KYN19989.1    KK852895    KDR14196.1    GDIP01056252    LRGB01002580    JAM47463.1    KZS06844.1    GDIQ01268882    JAJ82842.1    GDIQ01265019    JAJ86705.1    GDIP01027357    JAM76358.1    GAKT01000144    JAA92918.1    KQ435812    KOX72728.1    GDIQ01070796    JAN23941.1    GEGO01004261    JAR91143.1    GDIP01054713    JAM49002.1    GFXV01000276    MBW12081.1    APGK01059051    KB741292    ENN70385.1    GDIP01080941    JAM22774.1    GGMS01003889    MBY73092.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000283053    UP000218220    UP000007151    + More
UP000030765    UP000075880    UP000075884    UP000075886    UP000076408    UP000075883    UP000075920    UP000007062    UP000075882    UP000075840    UP000002282    UP000007801    UP000075903    UP000037069    UP000075900    UP000075902    UP000008711    UP000076407    UP000069272    UP000008744    UP000075885    UP000001819    UP000001292    UP000279307    UP000192221    UP000007798    UP000000304    UP000095301    UP000078542    UP000008237    UP000002320    UP000000311    UP000075809    UP000268350    UP000000803    UP000092443    UP000092460    UP000007755    UP000183832    UP000092553    UP000000673    UP000235965    UP000092445    UP000053097    UP000091820    UP000078541    UP000001070    UP000095300    UP000005205    UP000069940    UP000249989    UP000076502    UP000008792    UP000009192    UP000007266    UP000053825    UP000036403    UP000009046    UP000078540    UP000078200    UP000002358    UP000054359    UP000000305    UP000005203    UP000078492    UP000027135    UP000076858    UP000053105    UP000019118    UP000192223   

PRIDE

H9JMS0    Q9W2C9    H0RNL9    Q9N9Y8   

Pfam

PF00530   SRCR        + More
PF01186   Lysyl_oxidase

Interpro

IPR001190   SRCR        + More
IPR036772   SRCR-like_dom_sf       
IPR001695   Lysyl_oxidase       
IPR017448   SRCR-like_dom       
IPR019828   Lysyl_oxidase_CS       

SUPFAM

SSF56487   SSF56487       

Gene 3D

3.10.250.10    

ProteinModelPortal

H9JMS0   A0A0N1PI89   A0A0N1I3I6   A0A3S2NN45   A0A2H1V7S0   A0A2A4J826   + More
A0A212F4W5   A0A084W394   A0A182JJM3   A0A182N5M8   A0A182QRR0   A0A182YGH7   A0A182MNL6   A0A182W0I7   Q7QBA0   A0A182L7I8   A0A182I7X8   B4P8E9   B3MJ04   A0A182VAU7   A0A0L0CM11   A0A182RYI1   A0A182TK12   B3NN17   A0A182XIX9   A0A182F6N6   B4GHF6   A0A182P8X5   Q28XR1   T1PJI8   B4I7W2   A0A3L8DKP5   A0A1W4UZ01   A0A0J9U811   B4MS10   B4QGL0   A0A1I8MTI8   A0A195D5J7   E2BNK3   B0WJ73   E2AIQ3   A0A151WMF5   A0A3B0JP91   Q9W2C9   H0RNL9   A0A1Q3FPA5   A0A034WB96   A0A1A9Y7Y6   A0A1B0ARI1   F4WLF0   A0A1J1I5J6   A0A0M4E8C4   W5J9E1   Q9N9Y8   A0A2J7PI67   A0A1A9ZRG9   A0A026X3Y3   A0A1A9X3F4   A0A195FY20   B4J6A1   A0A034W761   A0A1I8PDV5   A0A158NVI9   A0A0A1WG43   A0A182H0M1   A0A154NVR5   B4LLQ2   W8C566   C5WLU2   V9IFH6   E9IWS9   B4KNS1   A0A1Y1MMJ8   D6X0V2   A0A0L7RJH8   A0A0J7L8M1   E0VBQ5   A0A0K8TZK6   A0A195BMZ9   A0A1A9VEE9   K7IM98   A0A087TCQ9   E9GHI3   A0A088ADF0   A0A195E561   A0A067R7D2   A0A0P5YL50   A0A0P5EIX5   A0A0N8AL55   A0A0P6AM69   T1E173   A0A0N0U4V5   A0A0N8E1K9   A0A147BK26   A0A0P5YQE2   A0A2H8TD94   N6TMA4   A0A0P5XQY5   A0A1W4XWS8   A0A2S2Q7B9  

PDB

5ZE3     E-value=2.34275e-94,     Score=883

KEGG

101739481    K00280 lysyl oxidase-like protein 2/3/4 [EC:1.4.3.-] | (RefSeq) lysyl oxidase homolog 3

GO

GO:0016020   GO:0005044   GO:0005507   GO:0016641   GO:0016021   GO:0006464   GO:0004720   GO:0007155   GO:0022857   GO:0007165   GO:0006418   GO:0003707   GO:0006281   GO:0006259   GO:0055114  

SignalP

Position:   1 - 24,         Likelihood:  0.972843

 

 

Length:

493

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

6.03118999999998

Exp number, first 60 AAs:

6.02893

Total prob of N-in:

0.32148

outside

1  -  493

 

 

Pi

33.120753

Theta

33.420723

Tajima's D

-0.452421

CLR

0.470729

CSRT

0.252787360631968

Interpretation

Uncertain