Gene

KWMTBOMO15574

Pre Gene Modal

BGIBMGA010820

Annotation

PREDICTED:_uncharacterized_protein_LOC105842539_[Bombyx_mori]

Location

Bomo_Chr26(+):3006225-3008923      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.299

CDS

ATGATGAGTGCTCGCTGTAAGAAGTTGTTGGAGTTAGCTATGAGGCAAAAAGATTCAGAGGATTTAACTGTGAAACAACGTATGAGAGAACGTACTCCATTAGCTCAGAAGGATATCTTGCGATCCCTGCCCGGCCCGTCAGGTACTCTGGTAGCTCAGCAAGATATCTTGCAATCTTTGCCCGGCCCGTCAGGTAATCGAGCTTATAGTTCTGATCGTACTTCTCTCGGCGAAGATTATAGTTCTGATGACGATGCGCAGGATTGTAATTGGTTCCCTGCTGGTACACATGATGAACACGTGTCATCATCGTTATCTAGCAAGACATCTACCCCTAGAAGTATTGGAAGCCTTACTGTCCCAGCTGTCCCAGCGTTGGTTTCTCAAACACAGGATGATGTGAGAAAAAAAAGGAAGCGTGGTGTCGGTATGATGCAAAGAAAACTCCGTAAAGAAAGAACAGAAAAAATTAAAAGAGGGGAAGAATACATAAATCAAGCTGGGAAAAAAATATTGGGTAAATCTGTAGGTGAACTAAAAGAATGCAGATTAAAATGTAAAACTAAATTTACAAATGCACAATTACAAAGAGTTTTTGCGGATTATCGCGCCATGGAAACTAGGGATATGCAACGTTTACATTTAAGTAATCATATACTATTAACACCGCCAATTAGAGTTAAACAGGTTGAAAACAAAAAGAAAAGAGAAGTATCTGTAGAGTACTTTATTGAAAATGAAGGTAATTTAGTAAAAGTTTGTCAAAACTGTTTTCTTAACGTGTATGGTGAGAATCGTGGTTTTGTGAACGGCATAATTGACAAGAAGAAAAAGTCAGCTACAGGTATCATTGGACGGGATGAAAGAGGCAGACATGAGCCAAAAATTAAACATTCAAGTGAAGCAATTGATTATGTGCGTAATCATATTTCTAATTTCCCTGCATACGAAAGCCACTATTCAAGACGACACACTACGAAAAAATACCTGGAGACTGGCTTGAATTTACAAAAAATGTATAACTTATACCTAGACCAACATACCATGGACAACATAACTACAAAAATAGTTAGCATTTCTACATATAGTAATATTTTTAAGACATTCAATTTAAAATTTAAAAAGCCACATAACGATACTTGTCATACTTGTGATACATTTGTAGCAAAAATAAAAATTACTATAGATGACACCGAGAAAACGAGACTACATGACGAACATGTCTCTCATCAGGATAAAGCGAATTTCCATTACGAATGTAAATCATTCGATAAACAACGCGCCAAGGCATCTGGGAATACTATCGTTGTCGCTGTGTGTGATTTACAGCAGTGTCTCGCTACACCATACTTAAATACTAGTGTAGCATTTTACAAAAGGAAGCTATGGACTTTTAATTTCACAGTCAGAAATTGTAACACTGGGAAAACTACTTGCTTCATGTGGCATGAAGCTATCGCGCAACGTGGTGCTGACGAAATAGCATCTTGCTTAAAAATGTTCATAATGAGTTTACCCGAAGAAACAGAGCACGTTATTATTTATTCAGATACATGTCCCGGACAGACCCGCAACAACACATTACCTGTTGTATATAACTACATACTTACGCAGAAAGTTGGTTTGAAGACTATAGATCATAAATTTCTAGTTCCTGGTCATACACATTTAGAGTGTGATGCTGACCATGCCTCAATTGAGCGTGCCAAGAAGAAATATAATGGAAGAATTTCAATTCCAAATGACTGGTACATGCTTGTGAGAATGGTCAGCAGTAAGTTCACTGTGATAGAATTGTCACAAGACGACATTTTTGCATTTTCGAGCATTCTAAAGCAGTCGCTTATAAAGAAGACCAAAGATCAAAATAACGCTCCTTTTCTGTGGCGTAATATATTTTGGATACGTGTCGAGAAAGAACATCCTTGTTTCTTTTCTTTTAAGTATTCACTGAGAGTGGAAGACGAGTTTAAAATATGTGACATGAAGAGGAAAGCTAGAGCCAGTCGAAGCAATCAACCAATAATGGATGTTCGTAAGGCATACAATCAGCCATTATTAATAAGTAAAGAAAAACATAAGGATATTTTATCTTTATTACAGTACATTGATCCAGTGTACCATGATTTCTATAACAATGTAATAAAGTCTGACAACGACGTAGTAGACACATCACATATAAGTGATTATAATTCCGATTCTGAATAG

Protein

MMSARCKKLLELAMRQKDSEDLTVKQRMRERTPLAQKDILRSLPGPSGTLVAQQDILQSLPGPSGNRAYSSDRTSLGEDYSSDDDAQDCNWFPAGTHDEHVSSSLSSKTSTPRSIGSLTVPAVPALVSQTQDDVRKKRKRGVGMMQRKLRKERTEKIKRGEEYINQAGKKILGKSVGELKECRLKCKTKFTNAQLQRVFADYRAMETRDMQRLHLSNHILLTPPIRVKQVENKKKREVSVEYFIENEGNLVKVCQNCFLNVYGENRGFVNGIIDKKKKSATGIIGRDERGRHEPKIKHSSEAIDYVRNHISNFPAYESHYSRRHTTKKYLETGLNLQKMYNLYLDQHTMDNITTKIVSISTYSNIFKTFNLKFKKPHNDTCHTCDTFVAKIKITIDDTEKTRLHDEHVSHQDKANFHYECKSFDKQRAKASGNTIVVAVCDLQQCLATPYLNTSVAFYKRKLWTFNFTVRNCNTGKTTCFMWHEAIAQRGADEIASCLKMFIMSLPEETEHVIIYSDTCPGQTRNNTLPVVYNYILTQKVGLKTIDHKFLVPGHTHLECDADHASIERAKKKYNGRISIPNDWYMLVRMVSSKFTVIELSQDDIFAFSSILKQSLIKKTKDQNNAPFLWRNIFWIRVEKEHPCFFSFKYSLRVEDEFKICDMKRKARASRSNQPIMDVRKAYNQPLLISKEKHKDILSLLQYIDPVYHDFYNNVIKSDNDVVDTSHISDYNSDSE

Uniprot

H9JMR7   A0A1Y1N893   J9LY49   A0A2S2NVW0   A0A2S2P112   X1X655   + More
A0A2S2NE39   J9KI78   A0A1Y1MM80   J9L426   J9LJZ9   A0A224X9R1   J9LGA5   J9LBJ2   X1WUB1   A0A1W7R683   A0A2P8XZ32   A0A2P8YMK7   A0A2P8ZEQ7   S4PHD9   W4XW95   J9KUZ8   W4ZD48   J9LBW7   J9LH36   J9L9L9   X1XRK2   W4YFK8   J9KUZ7   J9KRP2   A0A2H1VXX2   A0A2S2NW59   J9M4G9   J9LN28   J9LAK0   A0A2H1WUL7   A0A3S2LBW7   J9KD89   A0A026WEZ7   A0A226D081   J9LMT7   V4ACF2   A0A2S2NL43   A0A0A1XB56   A0A226D8H5   A0A2H1X0U8   A0A3S2P4C8   A0A0A9VZA8   J9L4I7   A0A2P8XAP7   A0A336L7N8  

Pubmed

19121390    28004739    29403074    23622113    24508170    23254933    + More
25830018    25401762   

EMBL

BABH01016775    GEZM01010383    JAV94073.1    ABLF02038617    GGMR01008668    MBY21287.1    + More
GGMR01010491    MBY23110.1    ABLF02024430    GGMR01002821    MBY15440.1    ABLF02022156    GEZM01027265    JAV86789.1    ABLF02008452    ABLF02014635    GFTR01007350    JAW09076.1    ABLF02017023    ABLF02013018    ABLF02037175    ABLF02037177    GEHC01000993    JAV46652.1    PYGN01001139    PSN37257.1    PYGN01000490    PSN45481.1    PYGN01000078    PSN54975.1    GAIX01003312    JAA89248.1    AAGJ04159061    ABLF02010095    AAGJ04019135    AAGJ04019136    AAGJ04019137    ABLF02019640    ABLF02019643    ABLF02019649    ABLF02023797    ABLF02004635    ABLF02004032    ABLF02042646    AAGJ04087115    ABLF02033230    ABLF02013311    ODYU01004805    SOQ45064.1    GGMR01008791    MBY21410.1    ABLF02022524    ABLF02003967    ABLF02026661    ABLF02026674    ABLF02026675    ABLF02041813    ABLF02060074    ODYU01011180    SOQ56761.1    RSAL01000260    RVE43346.1    ABLF02013766    KK107242    EZA54533.1    LNIX01000049    OXA38061.1    ABLF02010195    ABLF02010196    ABLF02055224    KB200426    ESP01684.1    GGMR01005294    MBY17913.1    GBXI01005713    JAD08579.1    LNIX01000033    OXA40556.1    ODYU01012570    SOQ58975.1    RSAL01000569    RVE41377.1    GBHO01042097    JAG01507.1    ABLF02028070    PYGN01008163    PSN29075.1    UFQS01001897    UFQT01001897    SSX12663.1    SSX32106.1   

Proteomes

UP000005204    UP000007819    UP000245037    UP000007110    UP000283053    UP000053097    + More
UP000198287    UP000030746   

PRIDE

H9JMR7   

Pfam

PF01192   RNA_pol_Rpb6        + More
PF13359   DDE_Tnp_4
PF16064   DUF4806
PF04500   FLYWCH
PF10551   MULE

Interpro

IPR020708   DNA-dir_RNA_polK_14-18kDa_CS        + More
IPR036161   RPB6/omega-like_sf       
IPR006110   Pol_omega/K/RPB6       
IPR012293   RNAP_RPB6_omega       
IPR027806   HARBI1_dom       
IPR032071   DUF4806       
IPR012337   RNaseH-like_sf       
IPR018289   MULE_transposase_dom       
IPR007588   Znf_FLYWCH       

SUPFAM

SSF63562   SSF63562        + More
SSF53098   SSF53098       

Gene 3D

3.90.940.10    

ProteinModelPortal

H9JMR7   A0A1Y1N893   J9LY49   A0A2S2NVW0   A0A2S2P112   X1X655   + More
A0A2S2NE39   J9KI78   A0A1Y1MM80   J9L426   J9LJZ9   A0A224X9R1   J9LGA5   J9LBJ2   X1WUB1   A0A1W7R683   A0A2P8XZ32   A0A2P8YMK7   A0A2P8ZEQ7   S4PHD9   W4XW95   J9KUZ8   W4ZD48   J9LBW7   J9LH36   J9L9L9   X1XRK2   W4YFK8   J9KUZ7   J9KRP2   A0A2H1VXX2   A0A2S2NW59   J9M4G9   J9LN28   J9LAK0   A0A2H1WUL7   A0A3S2LBW7   J9KD89   A0A026WEZ7   A0A226D081   J9LMT7   V4ACF2   A0A2S2NL43   A0A0A1XB56   A0A226D8H5   A0A2H1X0U8   A0A3S2P4C8   A0A0A9VZA8   J9L4I7   A0A2P8XAP7   A0A336L7N8  

KEGG

105842539    no KO assigned | (RefSeq) uncharacterized LOC105842539

GO

GO:0006366   GO:0006360   GO:0005666   GO:0005736   GO:0006383   GO:0005665   GO:0003899   GO:0003677   GO:0016740   GO:0016021  

Length:

735

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00371

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.00035

outside

1  -  735

 

 

Pi

147.226073

Theta

141.822781

Tajima's D

-0.553763

CLR

133.567527

CSRT

0.231088445577721

Interpretation

Uncertain