SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15570
Pre Gene Modal
BGIBMGA010818
Annotation
Facilitated_trehalose_transporter_Tret1_[Papilio_xuthus]
Location in the cell
Extracellular   Reliability : 2.77
 

Sequence

CDS
ATGTCAAAATGCAATAAAGTGAAAAATCCCTGTAAGATTTGCTTGGGTCCGGTGTCTCAAAAAACTGGGCTACAATGCGAGGGTGCTTGTGACAGCTGGGTGCACTACGGTTGTCTACATTACACTCCGGGCAGAATAAATGACATCAGGAAAGGTATAATCAAAGTAACTTGCCCGTGTCCTGATTGTAAGTCAATCCAACCGAAAGAATATAGAACTGACGAAGCATTTAGTTGTGATAACAGCTATTGTCCTGCCAATCGACCGCCGAGGTGCGAAAACACGACATGCCCTACTAATTCTGATAAAGAGAAGGCTAGTAATAACTCAGCATCAAAGCCGTGTCCCTTGGGGAGGTGCGGCGCTGGTTGCAAGCAGCACAGCAGCCCCCAAGTACCTAGTGCGCCCACCCCGCAATATTCTCCGGCATGCGTGCAGCATGAGAGGAAGCCTCTACCCCCGCCTACGGGTCGCTGTGTGCCAGACTGTCCCTCAGACGCGTCCAATGATTCGTACATTCCCGGAGATTTGGCCGTGAACACCGGAAGAAACGATTCAGTTCAAGTGGTGGAAGACATGTGCAAGACTGTTGGACAATTGACCAATCAAATCAACGAGCTGATGTGCAAGATGAAGGAATTGGTCGGCGAAAAGGGGCCCAATCAAGATGGGTGCTATCCCTCGGGAAACCACAAGAGCTGCGACAAAAAAGGGCCGAAAGCCCAATGCCCTAAGCCCTGTTATTGCCCAGGAAACCCTGCTAAAAAGAAATAA
Protein
MSKCNKVKNPCKICLGPVSQKTGLQCEGACDSWVHYGCLHYTPGRINDIRKGIIKVTCPCPDCKSIQPKEYRTDEAFSCDNSYCPANRPPRCENTTCPTNSDKEKASNNSASKPCPLGRCGAGCKQHSSPQVPSAPTPQYSPACVQHERKPLPPPTGRCVPDCPSDASNDSYIPGDLAVNTGRNDSVQVVEDMCKTVGQLTNQINELMCKMKELVGEKGPNQDGCYPSGNHKSCDKKGPKAQCPKPCYCPGNPAKKK

Summary

Similarity
Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
Pfam
PF00083   Sugar_tr
Interpro
IPR011011   Znf_FYVE_PHD        + More
IPR005828   MFS_sugar_transport-like       
IPR003663   Sugar/inositol_transpt       
IPR005829   Sugar_transporter_CS       
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR013083   Znf_RING/FYVE/PHD       
SUPFAM
SSF57903   SSF57903        + More
SSF103473   SSF103473       
Gene 3D

Ontologies

Topology

Length:
257
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4e-05
Exp number, first 60 AAs:
4e-05
Total prob of N-in:
0.25373
outside
1  -  257
 
 

Population Genetic Test Statistics

Pi
153.728735
Theta
153.990153
Tajima's D
-0.207586
CLR
0.407087
CSRT
0.310584470776461
Interpretation
Uncertain
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