SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15568
Pre Gene Modal
BGIBMGA010817
Annotation
PREDICTED:_uncharacterized_protein_LOC101737322_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.702 Mitochondrial   Reliability : 1.042 Nuclear   Reliability : 1.472
 

Sequence

CDS
ATGTTCATTTTCCTCGTGGTGATCGCGTCAGCGCTATGTCAATTATTCGATGACAGCCAGTATTGCGCTGTCAGATACAGAAGGCTGTGTCAAGGCAAAGGGCTTCATGTTGCCTGCCAGTTTCCAAACGCTGGACCGGGTTCTTCTTGCGAAAACTACACCGCCATCGATTTCGGTAACAAATTACAGCACTACGTTACACATTTTATAAACAGACGACGTCACCGTATTGCCTCTGGGGTCGAAAGAGTGCGCGGAGGTATCTTACTTCCGAAACCAGAACTCATGATGTTGGTGGAATGGGATCGCGAATTGGCATTTCTAGCACAGCGTCTGTCTGATCAGTGCCAGTTTGTACACGATGACTGCAGAGCTACTGTCCGTTACCCATACGCTGGACAGTCAGTGGGGGAGGTGCGTTGGCGTAAGTCCAGAGACACGGATGGGTTAATAGCGCAACGAGCAGTCAGACGGGTTTTAGAGGCGTGGTGGGGGGAAAAGAGGAGAGTGACTCCGAAACAGCTGACATCTCCATTTAGATTGGCGTCAAGAGGTGCTGTGTGGGGCCACTTCACCCAGCTAGCAGTGTGGACGCTGCGGGCGGTAGGATGTGGTGGGGTGCGCCATGGATCTTCCTACCCTCGTTTCCTGTTAGTCTGCGACTTCTCGCACACGAACATGTTGGGCCAGAGAACCCTCACGCCTGGGCCTTTAGCGCTCTGCCCCGGACATACTTCAAGAAAACCGCGGTCTGCTTATCCTTTGCTCTGTGGACCGGTCCGTCGTTCTCCTGGTCCAGCAACGCATGTCGCATCCGAGGATTACGAAGCCGAATATGAAGGGCCAGATGAATCAGAACCAGACTTCCTCCCACCGAGCTTGTGGTCACGACATGATCGCGTGTACAACGAAAGGATACAACAGAATGATGTTAAGCACGAAAACGGCTTATCTAGACCTTCAAACGTACCGGCATCTACCATGAAGACGTTTGGTGAAAGCGATGAAAGTGACCATCGAATTATGGAAATCAAGAAATCAATGTACAAAAAACCAAATTCGTCAATTTTCAGTGGTAACAATGAAAACGTGGAGATGCGAACGATCAGCGCGCGTGATCGATACAAAATATCTGCCGTACACAATCCTGCTTTGATTGACAATTACAGACCGACTGTCATTCGCCATCCTTGTACGAAACACCATTGGAAGCAGACGAGAGATCGACCTAGGAGGCCCGGTGCGAATGCTTTATTGAACTCTCAGTCAACGGTCGCGGCTCGTCACACACGGCTTTTGTCAGCGGTTTCCTTAATGTTGGACAAGGATGGCGCAGATCAGCTGTTCAGGGATACGGGTTTTAGTGTTGCCTGGAAGAAAAATGAAGGATAA
Protein
MFIFLVVIASALCQLFDDSQYCAVRYRRLCQGKGLHVACQFPNAGPGSSCENYTAIDFGNKLQHYVTHFINRRRHRIASGVERVRGGILLPKPELMMLVEWDRELAFLAQRLSDQCQFVHDDCRATVRYPYAGQSVGEVRWRKSRDTDGLIAQRAVRRVLEAWWGEKRRVTPKQLTSPFRLASRGAVWGHFTQLAVWTLRAVGCGGVRHGSSYPRFLLVCDFSHTNMLGQRTLTPGPLALCPGHTSRKPRSAYPLLCGPVRRSPGPATHVASEDYEAEYEGPDESEPDFLPPSLWSRHDRVYNERIQQNDVKHENGLSRPSNVPASTMKTFGESDESDHRIMEIKKSMYKKPNSSIFSGNNENVEMRTISARDRYKISAVHNPALIDNYRPTVIRHPCTKHHWKQTRDRPRRPGANALLNSQSTVAARHTRLLSAVSLMLDKDGADQLFRDTGFSVAWKKNEG

Summary

Similarity
Belongs to the CRISP family.
Pfam
PF00188   CAP
Interpro
IPR001283   CRISP-related        + More
IPR002413   V5_allergen-like       
IPR014044   CAP_domain       
IPR035940   CAP_sf       
SUPFAM
SSF55797   SSF55797       
Gene 3D
PDB
1QNX     E-value=2.95893e-13,     Score=183

Ontologies

GO

Topology

SignalP
Position:   1 - 13,         Likelihood:  0.982511
 
 
Length:
463
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04341
Exp number, first 60 AAs:
0.04012
Total prob of N-in:
0.00250
outside
1  -  463
 
 

Population Genetic Test Statistics

Pi
218.058662
Theta
165.749707
Tajima's D
0.816613
CLR
0.014955
CSRT
0.608969551522424
Interpretation
Uncertain
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