Silkworm Genome Informatics Database

Gene

KWMTBOMO15566

Annotation

PREDICTED:_attractin-like_protein_1_[Bombyx_mori]

Location

Bomo_Chr26(+):2896145-2902395 View in EpiBrowser

Location in the cell

Extracellular Reliability : 4.12

CDS

ATGATAGTGCCGGTAAATAAGTTGGTAGTGGTCGTGGTGTCGGCAGACGGCGCGCTGTGCGGGGCGGCGGCGGCGTGCGGCGCGTGCCTGGCGGCGGGCTGCCAGTGGTGCGGCGCCTGCCACGCGCACCGCACGTCCTGCAAGCGGTACCCGCACCAGCTAGTACAGACCCTCGACCAGTGCACGTGGAGCGACGAGGCGGCGCGCGAGCAGTGCGGGCGCCACCACTCGTGCGCCGCCTGCCACGCGCACAAGCACCACAAGCCGCGCGCCGCCAAAACTAACGGTACAACGGAATTACCACAGCGCGCTTGCTATTGGGACTACGATGCCATAGAGTGCAAACCGGCCAATACATCCGAGGACTTGCGCGCTATAAGTTCTGCCGGCGGCGCTGCGTGTCGGGCGCCGTGCTCCACGCTGCAGAACTGCGCCAATTGCACCGCCGAGGAGTGCATATGGTGCGCCTCGGCTGCCAGATGCGTCGACAAGAACGCGTACGGCGCGTCGTTCCCGCTGGGCGGGTGCCGCGCGTGGGCCACGAGCGGCGGCGTGTGCGCGGGCGCGGGCTGCGCGGCGCACGCGTCCTGCGCGGCGTGTCGCGGCGAGCCGGCGTGCGGCTGGTGCGACGACGGGCGCGGCGGCGGCCGCGGCGCCTGCGTGCCGGGGGGCGCCCGCGGCCCGCACGCGCCCGCGCTCTGCTCGCACCACAGGTACGCGCGCACCGACGCACACTATATTATATTAAATGCTTTAGATCAAGGATGA

Protein

MIVPVNKLVVVVVSADGALCGAAAACGACLAAGCQWCGACHAHRTSCKRYPHQLVQTLDQCTWSDEAAREQCGRHHSCAACHAHKHHKPRAAKTNGTTELPQRACYWDYDAIECKPANTSEDLRAISSAGGAACRAPCSTLQNCANCTAEECIWCASAARCVDKNAYGASFPLGGCRAWATSGGVCAGAGCAAHASCAACRGEPACGWCDDGRGGGRGACVPGGARGPHAPALCSHHRYARTDAHYIILNALDQG

Uniprot

H9JMR3

Pubmed

19121390

EMBL

BABH01016761 BABH01016762

Proteomes

UP000005204

PRIDE

H9JMR3

Pfam

PF00431 CUB

Interpro

IPR000742   EGF-like_dom        + More
IPR016201   PSI
IPR011043   Gal_Oxase/kelch_b-propeller
IPR035914   Sperma_CUB_dom_sf
IPR000859   CUB_dom
IPR015915   Kelch-typ_b-propeller

SUPFAM

SSF49854 SSF49854 + More
SSF50965 SSF50965

Gene 3D

2.120.10.80 2.60.120.290

CDD

cd00041 CUB

ProteinModelPortal

H9JMR3

KEGG

101737173 no KO assigned | (RefSeq) attractin-like protein 1

GO

GO:0016021 GO:0016020 GO:0004553 GO:0043565 GO:0032549 GO:0022857 GO:0007165 GO:0006418 GO:0003707 GO:0006281 GO:0006259

Length:

255

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.49947

Exp number, first 60 AAs:

2.48334

Total prob of N-in:

0.06070

outside

1 - 255

Pi

263.4175

Theta

165.340658

Tajima's D

0.159115

CLR

274.443877

CSRT

0.416279186040698

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics