Silkworm Genome Informatics Database

Gene

KWMTBOMO15563

Pre Gene Modal

BGIBMGA010815

Annotation

PREDICTED:_mushroom_body_large-type_Kenyon_cell-specific_protein_1_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr26(+):2819725-2865217 View in EpiBrowser

Transcription factor

HTH

Location in the cell

Nuclear Reliability : 4.03

CDS

ATGTACTGGTATCCGAGAGACAGAAAAAGAAACCGAGGTCTAGAACGGGTGGCGGAAGAGTTGATGGGTAGAAGAAAATGGAAACTATATCAGGACGCGTTAATACCAAAGCGAAACGAACAGGACGATTCAGACGATTCGATGCCATCCACCGACCCGCCCCCGGCGCTCAAGATCAAAACCATCGAGGAAATCAACGCGCCAGAAGACGAGAGGCCCAGGGTCGAGAGCGATGGAAACGGCCAAGAGTCGAAGACGTCACGGCCGGAGACGATCCTGGAGAGTCTGATCAAGAGGCCGGCGACGCAGCCGAAAGTGGAAGTCCTAGAGGAACCAGCGGATTGGAAGCCGCCAGACAAGTGCTACTTCTGCGTAGATGGTGAGCCCAGGGCTACAGCTGAAGCTGCTCAACCCGTCGGCGCTACCAGTCCCGCGTCAGAGTCCGATAGCAGTTCTGTGTCCGGCACGAACAGTCCAGCTGCGGCTCCTCCACTGCTGCAGCATCTCCTGCAGCTCCAAGCGCAGAACCCACAGACTATAGCACAGTTCCAGCAGATGATAGCGGCGTTGACGGCGCTGGGCACGGGGCTGGTGCCTCCACCGCTCACGCAGGCCTGGATGATGCAGAGGTTCGCGCAGCAGCGACACCAGGCCGACAGGTTGTCTGAAAGCGATAAAGCGGCGGCCCCTTCGTCTCCAAGTCCTGTAGAACAGCCGTTAGACCTGAGCGCCAAGTCCACGTCCAGCACCAGCGGTACGCCTCCGCCTGACCCCAAATTCTTGGATAGCAGATTAAGACGAACAGCTTTAGATGGAGCATCGAATAGCACGGGGCGGCGCACTTACACGGAAGACGAGCTGCAGTCAGCCCTGCGCGACATCCAGTCGGGGCGGCTCGGCACGCGACGGGCTGCCGTGCTTTACGGCATCCCACGCTCCACCCTACGGAACAAGGTCAACAAGTTCGGCCTCGTCGCGGATAACCACGACTCCGACCCCGACAGCGACCAGGACCGCGCCGAGTCTCCGCCTTCTGTCATACTCAAGATACCGACCTTCCCTCCCCCCGATGACAAGAGCCCGTCACCAGCGACGCCAGTCACTACGCCGATCACCCCCCTCACGCCGCTCATCTCCCAGCCGCCGCCGTCTCTGAACCCGCCTTCGAATCTCCTCTTGTCACCGTCCGTGTTCGCCGACCCGCCAGCTGGATCCCAACACATTTTTACGTCGTTGAATGACGTTATAGCGAAAAGCATAAGTCAGAAATTCCAGCAGCCGCTCGACAGGACACACCAAGCGGACCTTTCCTTCATGAGAGCGCCGGACGCTCGACACGTGTCAGTCATCAAGAGCCAATCTGACAACCAAAGGAACTACGCGATGCCGAGCAATTCCAAGGTGCCTACGAACAATAACGGCCAAGCGGCCGCTGGAGGCAAGGGCACTAGACCCAAGAGGGGTAAATATAGGAACTACGATCGAGACAGCCTCGTTGAGGCGGTGAAAGCAGTCCAGCGAGGAGAGATGTCCGTGCACCGCGCCGGCTCTTATTACGGTGTCCCCCACTCAACGCTCGAATACAAAGTCAAGGAAAGACATTTAATGCGGCCTAGGAAGCGCGAACCAAAACCTCCTCCACAAGATACGAAGCCGCAGCCTCCTAAGCCGCTCCCACCGAAGCCGCCGGGCAAGCCATTCTCAAACGGACTCAACGGGCCTGAGACTCCGACGTACCCGGCGGGCTACCCGTTCTGGGCTAGTCCCGGCTTCGCTCCTCCACCGACGCCAGATCTGTACGCGTCGCACATGATGCGGCGGTTGCGTGAAGAAGCACCTCCGCCAGCGAACGGCTCGTTCCTGGAGGGGATCATCCGGTCAAGCCTGGAGCGGCCCGGAGCGGCGCTGATGCAGCGGCTGGCGAGCGAGTCTCCGAGCCTGGTGCGGCGGCTCGCGGCCGACGTGGAGGAACCGGCGGCGCGACGGCCGCGGCTTGACAGCTCGGACCACCAGCTCGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAACTCCGTCCGCGGAACGGCACCCCCGCGCCCAGCCCGCCCCCCGCGCCGCCTGACCGCGCCTAG

Protein

MYWYPRDRKRNRGLERVAEELMGRRKWKLYQDALIPKRNEQDDSDDSMPSTDPPPALKIKTIEEINAPEDERPRVESDGNGQESKTSRPETILESLIKRPATQPKVEVLEEPADWKPPDKCYFCVDGEPRATAEAAQPVGATSPASESDSSSVSGTNSPAAAPPLLQHLLQLQAQNPQTIAQFQQMIAALTALGTGLVPPPLTQAWMMQRFAQQRHQADRLSESDKAAAPSSPSPVEQPLDLSAKSTSSTSGTPPPDPKFLDSRLRRTALDGASNSTGRRTYTEDELQSALRDIQSGRLGTRRAAVLYGIPRSTLRNKVNKFGLVADNHDSDPDSDQDRAESPPSVILKIPTFPPPDDKSPSPATPVTTPITPLTPLISQPPPSLNPPSNLLLSPSVFADPPAGSQHIFTSLNDVIAKSISQKFQQPLDRTHQADLSFMRAPDARHVSVIKSQSDNQRNYAMPSNSKVPTNNNGQAAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPPQDTKPQPPKPLPPKPPGKPFSNGLNGPETPTYPAGYPFWASPGFAPPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALMQRLASESPSLVRRLAADVEEPAARRPRLDSSDHQLAAEMREAVQRLRADKLRPRNGTPAPSPPPAPPDRA

Uniprot

A0A077D6A6 A0A3S2L3S5 A0A0N1IQG7 A0A194QIJ1 A0A2W1BQ16 A0A2A4K9P9 + More

Pubmed

26354079 28756777

EMBL

KJ913673 AIL29268.1 RSAL01000179 RVE44950.1 KQ459687 KPJ20458.1 + More
KQ458761 KPJ05214.1 KZ150025 PZC74810.1 NWSH01000009 PCG80937.1

Proteomes

UP000283053 UP000053240 UP000053268 UP000218220

Pfam

PF05225 HTH_psq

Interpro

IPR007889 HTH_Psq + More
IPR009057 Homeobox-like_sf

SUPFAM

SSF46689 SSF46689

ProteinModelPortal

A0A077D6A6 A0A3S2L3S5 A0A0N1IQG7 A0A194QIJ1 A0A2W1BQ16 A0A2A4K9P9 + More

PDB

2COB E-value=3.44548e-07, Score=133

KEGG

101737038 K20015 ecdysone-induced protein 93F, isoform B | (RefSeq) E93; mushroom body large-type Kenyon cell-

PATHWAY

04214 Apoptosis - fly - Bombyx mori (domestic silkworm)

GO

GO:0003677 GO:0005634 GO:0004553 GO:0043565 GO:0032549 GO:0022857 GO:0007165 GO:0006418 GO:0003707 GO:0006281 GO:0006259

Subcellular location

Nucleus

Length:

707

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.83694

Exp number, first 60 AAs:

0

Total prob of N-in:

0.17792

outside

1 - 707

Pi

185.513391

Theta

155.96438

Tajima's D

0.477642

CLR

0.271124

CSRT

0.505324733763312

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics