Gene

KWMTBOMO15561

Pre Gene Modal

BGIBMGA010813

Annotation

PREDICTED:_tetraspanin-33-like_[Plutella_xylostella]

Location

Bomo_Chr26(+):2565537-2573180      View in EpiBrowser

Full name

Tetraspanin      

Location in the cell

PlasmaMembrane   Reliability : 4.831

CDS

ATGCATCGGCGTCGAGCACCGAACTTTACGTATGTGAGCGGTTGTGTAAAATACATGATTTTTGTGATAAACTTCTTATTTTGGTTGGTAGGCGGATTGCTGATCGGAATCGGGCTATATTCATTTATTGACAAATGGCAAGCCACTGGACTTATAAAGCTCAACTCACTGTATGATTTTATTCTGAATATAAGCTTACTGATAGCTCTGATTGGCGGGGTTGTCTTCATAGTTAGTTTTGCTGGATGCGTTGGAGCATTGAGAGAGAACACTTGTCTGTTGAAATTTTATTCCCTGTGTCTGCTGATTCTGTTCCTGGTGGAGATGGGCGGGGCTGTATGCGGGTTCGTGTTCCCGCGCTCGCTGCAAGGCTTCTTGGAGCTGAGCTTCAAGGAACACGTGGTCCACGCGTACCGGGACGACACCGACCTGCAGAACTTCATCGATTTCGCTCAGCGAGATTTCCATTGCTGCGGCATCACTTCGGACGGCTACATGGACTGGGCCAAGAACGAGTACTTCAACTGCTCGTCGCCGTCGGTCGAGAGGTGCGGGGTTCCGTTCTCGTGCTGCATCAACGCGACCGACATATCGTCGGGGCTGGTCAATATCATGTGCGGCTATGGAGTGCAAAATTATCCGGTAGCGGAGGCTAGTAAGCGCATATGGACCAGTGGCTGCCTGGAGATAGTGCGGTCGTGGTCCGAGCGCAACCTGTACACCATCGCCACGGTCGCGCTGGGGGGCGCGCTCATGCAGCTCTTCGTTATATACCTCGCCAAGACCCTGGAGGGACAGATAGAGCTGCAAAAAGCAAGATGGCAAACATGA

Protein

MHRRRAPNFTYVSGCVKYMIFVINFLFWLVGGLLIGIGLYSFIDKWQATGLIKLNSLYDFILNISLLIALIGGVVFIVSFAGCVGALRENTCLLKFYSLCLLILFLVEMGGAVCGFVFPRSLQGFLELSFKEHVVHAYRDDTDLQNFIDFAQRDFHCCGITSDGYMDWAKNEYFNCSSPSVERCGVPFSCCINATDISSGLVNIMCGYGVQNYPVAEASKRIWTSGCLEIVRSWSERNLYTIATVALGGALMQLFVIYLAKTLEGQIELQKARWQT

Similarity

Belongs to the tetraspanin (TM4SF) family.

Uniprot

A0A2A4JQK0   A0A2W1BTZ1   A0A212EPJ2   A0A067R3G7   A0A0N1IBC9   A0A2P8YLE0   + More
A0A194QP02   A0A2H1V3P1   A0A212FDZ7   A0A195EEV1   A0A195EZ73   A0A158NZK7   A0A026WCD1   A0A139WCA0   E9IFP9   A0A310SI71   D6X246   A0A1S4EGC3   A0A0T6B8A6   A0A1B0GQB9   A0A1A9X8I7   A0A1A9V2I4   A0A1B0B256   A0A0L0C6S1   A0A1B0GDV4   A0A1L8DK36   A0A1B0AJ92   A0A069DYC7   R4FLJ4   A0A1W4X0J5   E0VTN4   B0X303   T1P9W2   A0A023FAV5   A0A023EM91   Q17DI6   F4W9X0   A0A1Q3F7H0   A0A1I8QC45   A0A151WKG9   A0A2H1V3P8   A0A0K8WFA2   A0A034WEQ0   A0A0A1WMY8   A0A0C9RDT6   A0A1B6C7H1   A0A232EDE9   K7JCE6   A0A0C9RD90   A0A182NMN1   A0A151IKA3   A0A1B6LEF5   A0A1B6HX27   A0A0K8TNN9   A0A182Q852   A0A0A9YG37   A0A1B6F8X5   A0A1I8M6I2   A0A182SKK6   A0A1Y1KPN6   A0A084VWL4   A0A182JMK8   A0A182VQ19   A0A182RH54   A0A2M4BW97   A0A2M4AUR3   A0A182PS60   A0A182V6M8   A0A182U301   A0A182X3A5   Q7QKB8   A0A182HZF4   A0A0L7QYT0   A0A2M3ZAU7   A0A182F6R5   W5J3C1   A0A182K8X8   A0A182MRF6   U5ETI8   A0A154P3U6   B4M3F6   A0A3B0K5L5   J3JYY2   A0A336KJK3   A0A2S2NMN4   J9JT82   A0A2H8TFV7   B4JLF2   A0A0Q9WBZ1   A0A195BRV6   A0A182Y4R1   B4L427   B3MYZ5   B4NKW3   E2A4Q8   Q9W4X6   B4NTZ0   B3P936   A0A0M5J1B1   E2BKZ1  

Pubmed

28756777    22118469    24845553    26354079    29403074    21347285    + More
24508170    30249741    18362917    19820115    21282665    26108605    26334808    20566863    25474469    24945155    26483478    17510324    21719571    25348373    25830018    28648823    20075255    26369729    25401762    26823975    25315136    28004739    24438588    12364791    14747013    17210077    20920257    23761445    17994087    22516182    25244985    20798317    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

NWSH01000883    PCG73723.1    KZ149936    PZC77125.1    AGBW02013459    OWR43377.1    + More
KK852781    KDR16632.1    KQ459687    KPJ20455.1    PYGN01000512    PSN45058.1    KQ458761    KPJ05211.1    ODYU01000535    SOQ35458.1    AGBW02008989    OWR51962.1    KQ979039    KYN23332.1    KQ981909    KYN33207.1    ADTU01000888    KK107321    QOIP01000002    EZA52699.1    RLU25391.1    KQ971371    KYB25562.1    GL762889    EFZ20602.1    KQ767877    OAD53280.1    EFA09920.2    LJIG01009446    KRT83063.1    AJVK01036094    JXJN01007427    JRES01000819    KNC28113.1    CCAG010012029    GFDF01007261    JAV06823.1    GBGD01002480    JAC86409.1    ACPB03005642    GAHY01001363    JAA76147.1    DS235767    EEB16709.1    DS232304    EDS39505.1    KA644738    AFP59367.1    GBBI01000548    JAC18164.1    JXUM01012327    GAPW01003176    KQ560351    JAC10422.1    KXJ82895.1    CH477293    EAT44518.1    GL888033    EGI69106.1    GFDL01011558    JAV23487.1    KQ983012    KYQ48373.1    ODYU01000534    SOQ35457.1    GDHF01002473    JAI49841.1    GAKP01006719    JAC52233.1    GBXI01013888    GBXI01009745    JAD00404.1    JAD04547.1    GBYB01005146    JAG74913.1    GEDC01028019    JAS09279.1    NNAY01006739    OXU16365.1    AAZX01003377    GBYB01011097    JAG80864.1    KQ977234    KYN04705.1    GEBQ01017909    JAT22068.1    GECU01028478    JAS79228.1    GDAI01002073    JAI15530.1    AXCN02001214    GBHO01015114    GBRD01002101    GDHC01009736    GDHC01007113    JAG28490.1    JAG63720.1    JAQ08893.1    JAQ11516.1    GECZ01023090    GECZ01003344    JAS46679.1    JAS66425.1    GEZM01077057    JAV63389.1    ATLV01017659    KE525181    KFB42358.1    AXCP01001871    GGFJ01008214    MBW57355.1    GGFK01011204    MBW44525.1    AAAB01008799    EAA03776.5    APCN01001973    KQ414688    KOC63707.1    GGFM01004881    MBW25632.1    ADMH02002112    ETN58847.1    AXCM01000815    GANO01002764    JAB57107.1    KQ434803    KZC05908.1    CH940651    EDW65331.1    OUUW01000021    SPP89494.1    BT128463    AEE63420.1    UFQS01000197    UFQT01000197    SSX01200.1    SSX21580.1    GGMR01005832    MBY18451.1    ABLF02021375    GFXV01001192    MBW12997.1    CH916370    EDW00405.1    KRF82184.1    KQ976423    KYM88750.1    CH933810    EDW07305.1    CH902632    EDV32839.2    CH964272    EDW84166.2    GL436716    EFN71592.1    AE014298    BT060443    AAF45797.1    ACN22208.1    CH983411    EDX16437.1    CH954183    EDV45641.1    CP012528    ALC49456.1    GL448858    EFN83645.1   

Proteomes

UP000218220    UP000007151    UP000027135    UP000053240    UP000245037    UP000053268    + More
UP000078492    UP000078541    UP000005205    UP000053097    UP000279307    UP000007266    UP000079169    UP000092462    UP000092443    UP000078200    UP000092460    UP000037069    UP000092444    UP000092445    UP000015103    UP000192223    UP000009046    UP000002320    UP000069940    UP000249989    UP000008820    UP000007755    UP000095300    UP000075809    UP000215335    UP000002358    UP000075884    UP000078542    UP000075886    UP000095301    UP000075901    UP000030765    UP000075880    UP000075920    UP000075900    UP000075885    UP000075903    UP000075902    UP000076407    UP000007062    UP000075840    UP000053825    UP000069272    UP000000673    UP000075881    UP000075883    UP000076502    UP000008792    UP000268350    UP000007819    UP000001070    UP000078540    UP000076408    UP000009192    UP000007801    UP000007798    UP000000311    UP000000803    UP000000304    UP000008711    UP000092553    UP000008237   

PRIDE

Q9W4X6   

Pfam

PF00335   Tetraspanin

Interpro

IPR000301   Tetraspanin        + More
IPR018503   Tetraspanin_CS       
IPR018499   Tetraspanin/Peripherin       
IPR008952   Tetraspanin_EC2_sf       

SUPFAM

SSF48652   SSF48652       

Gene 3D

1.10.1450.10    

ProteinModelPortal

A0A2A4JQK0   A0A2W1BTZ1   A0A212EPJ2   A0A067R3G7   A0A0N1IBC9   A0A2P8YLE0   + More
A0A194QP02   A0A2H1V3P1   A0A212FDZ7   A0A195EEV1   A0A195EZ73   A0A158NZK7   A0A026WCD1   A0A139WCA0   E9IFP9   A0A310SI71   D6X246   A0A1S4EGC3   A0A0T6B8A6   A0A1B0GQB9   A0A1A9X8I7   A0A1A9V2I4   A0A1B0B256   A0A0L0C6S1   A0A1B0GDV4   A0A1L8DK36   A0A1B0AJ92   A0A069DYC7   R4FLJ4   A0A1W4X0J5   E0VTN4   B0X303   T1P9W2   A0A023FAV5   A0A023EM91   Q17DI6   F4W9X0   A0A1Q3F7H0   A0A1I8QC45   A0A151WKG9   A0A2H1V3P8   A0A0K8WFA2   A0A034WEQ0   A0A0A1WMY8   A0A0C9RDT6   A0A1B6C7H1   A0A232EDE9   K7JCE6   A0A0C9RD90   A0A182NMN1   A0A151IKA3   A0A1B6LEF5   A0A1B6HX27   A0A0K8TNN9   A0A182Q852   A0A0A9YG37   A0A1B6F8X5   A0A1I8M6I2   A0A182SKK6   A0A1Y1KPN6   A0A084VWL4   A0A182JMK8   A0A182VQ19   A0A182RH54   A0A2M4BW97   A0A2M4AUR3   A0A182PS60   A0A182V6M8   A0A182U301   A0A182X3A5   Q7QKB8   A0A182HZF4   A0A0L7QYT0   A0A2M3ZAU7   A0A182F6R5   W5J3C1   A0A182K8X8   A0A182MRF6   U5ETI8   A0A154P3U6   B4M3F6   A0A3B0K5L5   J3JYY2   A0A336KJK3   A0A2S2NMN4   J9JT82   A0A2H8TFV7   B4JLF2   A0A0Q9WBZ1   A0A195BRV6   A0A182Y4R1   B4L427   B3MYZ5   B4NKW3   E2A4Q8   Q9W4X6   B4NTZ0   B3P936   A0A0M5J1B1   E2BKZ1  

PDB

5TCX     E-value=8.16842e-11,     Score=159

KEGG

101738060    K17346 tetraspanin-33 | (RefSeq) tetraspanin-33-like

GO

GO:0016021   GO:0051604   GO:0005887   GO:0072659   GO:0006886   GO:0005623   GO:0004553   GO:0043565   GO:0032549   GO:0022857   GO:0007165   GO:0006418   GO:0003707   GO:0006281   GO:0006259  

Subcellular location

Membrane  

Length:

276

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

88.7418900000001

Exp number, first 60 AAs:

23.49945

Total prob of N-in:

0.99929

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  61

TMhelix

62  -  84

inside

85  -  95

TMhelix

96  -  118

outside

119  -  237

TMhelix

238  -  260

inside

261  -  276

 

 

Pi

229.167241

Theta

156.72666

Tajima's D

1.060664

CLR

1.318388

CSRT

0.684965751712414

Interpretation

Uncertain