Gene

KWMTBOMO15559  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010811

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_myrosinase_1-like_[Bombyx_mori]

Location

Bomo_Chr26(+):2546057-2549740      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.286

CDS

ATGAAGACGTTCCTGCTATTGGGGTTGTTGGGGGCGTATTGCTCTGCACTGTCAACCAAGCAGCAGAGGAGGTTCCCGGATGACTTCCTGATTGGAACTGCCACCGCCTCCTACCAGATCGAAGGAGCTTGGAATGAAGATGGAAAAGGGGAAAATATCTGGGACTACATGACCCACAACAACCCAACAGTTATCGCCGATGAAAGCAATGGTGACATCGCTGCCGACTCTTACCACAACGTGGAGAGAGATGTGGAGATGATGCGAGAGCTGGGTCTTGATGTATATCGCTTCTCGCTTTCGTGGTCCAGAATCTTACCCTCGGGATTCGCCAATGAAGTCAACGAAGCAGGAGTCGACTACTACAACAGGCTAATCAACGAGATGTTGAAATACAATATTACTCCAATGATTTCTCTGTATCACTGGGACTTGCCGCAAAAGTTGCAGGAATTGGGAGGCTTTGCCAATCCACTGATTGCCGATTGGTTTGAAGACTATGCACGCGTGGTCTTTTCCAAATTGGGTGACAGAGTCAAGCTCTGGATTACTTTTAACGAACCCAGAGAAGTGTGCTACGAAGGCTACGGTTTCACAACTAAAGCTCCGATCCTCAACGCTACCGCCGTCGGCACGTATATTGTCATAGCGTGGGGTATCTACGCCCATCCTATATTTTCTCAAGAAGGTGGTTTCCCGAAAGAATTAGTTGTCAGAGTAGCTGAAAAAAGCGCAGAGCACGGCTACCCGCGCACCAGACTCCCGCAGCTCTCCGAGGAAGAACGAGTGTTGATCAGAGGAACCGCTGACTTCTTTGGAGTGAACCACTATACTGGCTACTTGGTGTCCGCCACGAGACACACTCCTGAATATTCTACGGTATCCTTGCTCAGTGACATCAACGTGGGAACTTACCGCCCGGTCGAATGGCTGCAATCAGCTGCATCCTGGTTGACGCTTATGCCAAACAGCATTTATGACGTGCTGACACATCTCAAGAACAAATACAATGATCCCATATTTTACGTCACGGAGAACGGGTGGGCGACTTCTCCTGAAATTGGACTGGAAGACGACGACAGGATTACATATTACAGAGCTGCTCTAGAGAGCATTTTGGATAGTCTCGATGCCGGAGTGAGGCTCAAGGGCTACATGGCCTGGAGTCTGATGGATAACTTCGAATGGCTGGCAGGATACACCGAACGTTTCGGTTTGTACGAGGTTGACTTTTCGGATCCCGCCCGCCCTCGCACCCCGCGCAAGTCCGCCTTCGTCTACAAGGAGATCTTGAGGAGCAGGGTCATCGACCACGACTACGAGCCGGACACCGCCGTCATGACCATCGACGAGGGACACTGA

Protein

MKTFLLLGLLGAYCSALSTKQQRRFPDDFLIGTATASYQIEGAWNEDGKGENIWDYMTHNNPTVIADESNGDIAADSYHNVERDVEMMRELGLDVYRFSLSWSRILPSGFANEVNEAGVDYYNRLINEMLKYNITPMISLYHWDLPQKLQELGGFANPLIADWFEDYARVVFSKLGDRVKLWITFNEPREVCYEGYGFTTKAPILNATAVGTYIVIAWGIYAHPIFSQEGGFPKELVVRVAEKSAEHGYPRTRLPQLSEEERVLIRGTADFFGVNHYTGYLVSATRHTPEYSTVSLLSDINVGTYRPVEWLQSAASWLTLMPNSIYDVLTHLKNKYNDPIFYVTENGWATSPEIGLEDDDRITYYRAALESILDSLDAGVRLKGYMAWSLMDNFEWLAGYTERFGLYEVDFSDPARPRTPRKSAFVYKEILRSRVIDHDYEPDTAVMTIDEGH

Similarity

Belongs to the glycosyl hydrolase 1 family.

Uniprot

H9JMQ8   H9JMQ9   A0A2A4JPU6   A0A2A4JNT8   A0A2A4JNV2   O61594   + More
A0A2W1BPZ1   A0A2H1W426   A0A194PJU3   A0A2W1BQ65   A0A194RQF8   A0A2A4JPN8   A0A2H1VWN4   A0A194PRE4   A0A2A4JQ50   A0A2H1W4S5   A0A212F3B1   A0A0L7LHZ4   A0A2H1VWZ6   A0A2H1VWQ1   A0A2W1BVA2   H9J7W0   A0A2A4JS29   A0A2H1WY61   A0A2W1BA28   G9F9G8   A0A194R360   A0A194PMT2   A0A212EPH6   A0A1W1EGN8   G9F9G9   A0A194PPG4   A0A212F3B9   A0A194R3H3   A0A3S2PE71   A0A2H1VF65   A0A2A4JPS5   A0A194RQP8   A0A194R3H6   A0A194R8P7   G9F9I3   A0A194PNR8   A0A212FKW0   A0A194PPG9   A0A194R4S7   A0A194PMT8   A0A194R365   A0A194PU18   A0A212FF90   A0A212EXF5   A0A194PNS3   A0A212FF93   A0A194R400   A0A0L7LEZ3   G9F9H3   A0A3S2NZ22   H9JLY5   H9JXB3   H9JLY4   A0A194PMG8   A0A0L7KVS3   A0A212FBG8   Q16WF2   A0A212EXF2   A0A1S4G3W5   Q16ET6   A0A182HAK7   B0WNN7   A0A1Y9GLV6   Q7Q5I1   A0A1Y9J0B2   A0A2W1BGQ3   A0A1Y9IS68   A0A212F3C5   A0A1Y9IVG9   A0A182G2R0   A0A182HAK9   W5JK33   Q5TQY9   A0A2W1BWF3   A0A1Q3FR87   A0A1Y9GLW1   A0A182LL17   A0A194PLT4   W5JPB7   A0A1Y9IW90   A0A336MAL5   A0A1Y9IVW9   A0A1Y9J107   A0A1L8DR18   A0A1Y9IRY9   A0A1L8DQS5   A0A0B5EDK8   A0A182T8N3   A0A182LWK9   A0A0K8W3Q7   B0WNN5   A0A0M4E0Q2   A0A182FEZ3   A0A084VCJ7  

Pubmed

19121390    11342030    15511222    27936116    28756777    26354079    + More
22118469    26227816    28680679    17510324    26483478    12364791    14747013    17210077    20920257    23761445    20966253    25596091    24438588   

EMBL

BABH01016738    NWSH01000883    PCG73728.1    PCG73725.1    PCG73727.1    AF052729    + More
AAC06038.1    KZ149936    PZC77129.1    ODYU01006201    SOQ47841.1    KQ459601    KPI93701.1    PZC77128.1    KQ459875    KPJ19634.1    PCG73726.1    ODYU01004903    SOQ45257.1    KPI93700.1    PCG73724.1    ODYU01006202    SOQ47842.1    AGBW02010585    OWR48225.1    JTDY01001063    KOB74989.1    SOQ45256.1    SOQ45255.1    PZC77127.1    BABH01020023    BABH01020024    NWSH01000679    PCG74847.1    ODYU01011923    SOQ57942.1    KZ150738    PZC70347.1    JN033713    AEW46866.1    KQ460779    KPJ12243.1    KQ459598    KPI94627.1    AGBW02013459    OWR43376.1    LT635663    SGZ49382.1    JN033714    AEW46867.1    KPI94624.1    OWR48226.1    KPJ12242.1    RSAL01000077    RVE48784.1    ODYU01001971    SOQ38904.1    NWSH01000819    PCG74065.1    KPJ19635.1    KPJ12247.1    KPJ12246.1    JN033728    AEW46881.1    KPI94628.1    AGBW02007954    OWR54377.1    KPI94629.1    KPJ12245.1    KPI94632.1    KPJ12248.1    KPI94630.1    AGBW02008847    OWR52398.1    AGBW02011758    OWR46180.1    KPI94633.1    OWR52397.1    KPJ12249.1    JTDY01001400    KOB73970.1    JN033718    AEW46871.1    RSAL01000019    RVE52748.1    BABH01005438    BABH01035726    BABH01005437    KPI94631.1    JTDY01005139    KOB67338.1    AGBW02009344    OWR51063.1    CH477568    EAT38910.1    OWR46178.1    CH478582    EAT32750.1    JXUM01031352    KQ560919    KXJ80348.1    DS232013    EDS31873.1    APCN01002262    AAAB01008960    EAA11668.3    KZ150146    PZC72895.1    OWR48224.1    JXUM01040976    KQ561266    KXJ79155.1    JXUM01031354    KXJ80350.1    ADMH02000892    ETN64737.1    EAL40074.2    PZC77130.1    GFDL01004884    JAV30161.1    KPI93699.1    ETN64735.1    UFQS01000574    UFQT01000574    SSX05045.1    SSX25407.1    GFDF01005304    JAV08780.1    GFDF01005305    JAV08779.1    KP068696    AJE75667.1    AXCM01009805    GDHF01006779    JAI45535.1    EDS31871.1    CP012523    ALC38766.1    ATLV01010792    KE524614    KFB35691.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000283053    UP000008820    UP000069940    UP000249989    UP000002320    UP000075840    UP000007062    UP000076407    UP000075903    UP000075920    UP000000673    UP000075882    UP000075901    UP000075883    UP000092553    UP000069272    UP000030765   

PRIDE

H9JMQ8    H9JMQ9    H9J7W0    H9JLY5    H9JXB3    H9JLY4    + More

Pfam

PF00232   Glyco_hydro_1        + More
PF00335   Tetraspanin

Interpro

IPR017853   Glycoside_hydrolase_SF        + More
IPR001360   Glyco_hydro_1       
IPR033132   Glyco_hydro_1_N_CS       
IPR018499   Tetraspanin/Peripherin       
IPR018120   Glyco_hydro_1_AS       

SUPFAM

SSF51445   SSF51445       

ProteinModelPortal

H9JMQ8   H9JMQ9   A0A2A4JPU6   A0A2A4JNT8   A0A2A4JNV2   O61594   + More
A0A2W1BPZ1   A0A2H1W426   A0A194PJU3   A0A2W1BQ65   A0A194RQF8   A0A2A4JPN8   A0A2H1VWN4   A0A194PRE4   A0A2A4JQ50   A0A2H1W4S5   A0A212F3B1   A0A0L7LHZ4   A0A2H1VWZ6   A0A2H1VWQ1   A0A2W1BVA2   H9J7W0   A0A2A4JS29   A0A2H1WY61   A0A2W1BA28   G9F9G8   A0A194R360   A0A194PMT2   A0A212EPH6   A0A1W1EGN8   G9F9G9   A0A194PPG4   A0A212F3B9   A0A194R3H3   A0A3S2PE71   A0A2H1VF65   A0A2A4JPS5   A0A194RQP8   A0A194R3H6   A0A194R8P7   G9F9I3   A0A194PNR8   A0A212FKW0   A0A194PPG9   A0A194R4S7   A0A194PMT8   A0A194R365   A0A194PU18   A0A212FF90   A0A212EXF5   A0A194PNS3   A0A212FF93   A0A194R400   A0A0L7LEZ3   G9F9H3   A0A3S2NZ22   H9JLY5   H9JXB3   H9JLY4   A0A194PMG8   A0A0L7KVS3   A0A212FBG8   Q16WF2   A0A212EXF2   A0A1S4G3W5   Q16ET6   A0A182HAK7   B0WNN7   A0A1Y9GLV6   Q7Q5I1   A0A1Y9J0B2   A0A2W1BGQ3   A0A1Y9IS68   A0A212F3C5   A0A1Y9IVG9   A0A182G2R0   A0A182HAK9   W5JK33   Q5TQY9   A0A2W1BWF3   A0A1Q3FR87   A0A1Y9GLW1   A0A182LL17   A0A194PLT4   W5JPB7   A0A1Y9IW90   A0A336MAL5   A0A1Y9IVW9   A0A1Y9J107   A0A1L8DR18   A0A1Y9IRY9   A0A1L8DQS5   A0A0B5EDK8   A0A182T8N3   A0A182LWK9   A0A0K8W3Q7   B0WNN5   A0A0M4E0Q2   A0A182FEZ3   A0A084VCJ7  

PDB

5CG0     E-value=0,     Score=1687

KEGG

101736636    no KO assigned | (RefSeq) myrosinase 1-like

GO

GO:0005975   GO:0004553   GO:0016021   GO:0008152   GO:0016798   GO:0008422   GO:0043565   GO:0032549   GO:0022857   GO:0007165   GO:0006418   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR10353  

SignalP

Position:   1 - 16,         Likelihood:  0.996268

 

 

Length:

453

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.27166

Exp number, first 60 AAs:

0.08438

Total prob of N-in:

0.03735

outside

1  -  453

 

 

Pi

198.230409

Theta

188.079742

Tajima's D

-0.357304

CLR

0.324711

CSRT

0.278386080695965

Interpretation

Uncertain