Gene

KWMTBOMO15549  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010738

Annotation

PREDICTED:_retinol_dehydrogenase_14-like_[Amyelois_transitella]

Location

Bomo_Chr26(-):2291175-2297059      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.921

CDS

ATGATTGTCGCGGAATTCTGGAAAGTGAGTTACCTTTGGTGGCTCCTCCCGGCTCTCATCATAGCTGGCCTGATCGCCATACTAGGTCTCATTGGTGTACTCTTCGCCTTACATCTGTACGTTAAGTGGACTTGTGGTATTTACAACGGGAAAACCAAAATGGACGGGAAGACGGTAATAGTTACAGGATGCACTAGCGGAATAGGAAAGGAAACCGCCAGGGAATTGGCTCAGAGAGGCGCTCGAGTCATAATGGCCTGCAGGAATATGGACGCCGCTGAGAAAGTCAAAGCTGAAATCATCGAAACAACTAGAAACACCAAAATAGAAGTCAAGAAACTCGATCTCAGTTCATTCGCGTCTATCAGAGAATTCGCTAAAGACATCAACAAAACAGAAGCCCGTCTGGATGTCCTTGTGCACAACGCAGGATACGCCGAAACATTTAAAAAGAACACAACAGTTGATAACCTCGAAATGACTATGGCCACAAACCATTACGGTCCCTTTTTACTCACTCATCTGCTGATAGATTTATTGAAGAAAACCGCGCCCTCGAGAATCGTTATAGTAGCATCCTCTTTATACAGACTTGCTTCGTTTGACTTAAACAAACCGAACCCTGTGGATTCGATTCCAGGGTATCTGTACTACGCTTCCAAAGAAGCGAATATTCTGTTCACAAAAGAATTGGCCCGGAGATTGGAAGGTACTGGGGTTACAGCTAACTGCCTGCACCCTGGACTAATCGATACGGGCATCTGGAGATCAGTCCCGGCACCATTAAGTTGGGGCTTAAACTTGATTAACAAATGCTTCTTTAAGACTCCAGAGCAGGGTTGCCAGACTACAATAATGTTAGCAGTTGATGAAAGTTTAGAGAAAGTGAACGGAAAATACTTTTCTGACTGTCAGGAGAGTTCGGTGTCTCAATCAGCTAGTGACATGGCAAAAGCTAGGAAATTATGGGAGATATCTGAGAAAATAGTTAATCTTGAGGAGACTGACCCAAGAATTTTGTAA

Protein

MIVAEFWKVSYLWWLLPALIIAGLIAILGLIGVLFALHLYVKWTCGIYNGKTKMDGKTVIVTGCTSGIGKETARELAQRGARVIMACRNMDAAEKVKAEIIETTRNTKIEVKKLDLSSFASIREFAKDINKTEARLDVLVHNAGYAETFKKNTTVDNLEMTMATNHYGPFLLTHLLIDLLKKTAPSRIVIVASSLYRLASFDLNKPNPVDSIPGYLYYASKEANILFTKELARRLEGTGVTANCLHPGLIDTGIWRSVPAPLSWGLNLINKCFFKTPEQGCQTTIMLAVDESLEKVNGKYFSDCQESSVSQSASDMAKARKLWEISEKIVNLEETDPRIL

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JMI5   A0A2W1BQ73   A0A1Q3G5I9   A0A2A4J204   A0A0L7LA56   A0A2H1VPB2   + More
S4PC03   A0A212EHQ0   I4DJW3   A0A3S2LVK4   A0A194PLT0   A0A0N0PDQ0   A0A1B6LG81   K7IP74   A0A1B6FRX7   A0A1B6IV52   A0A232FAM6   A0A151IL06   E2AM66   A0A195FH86   A0A151IVL0   A0A026WH33   E2BNF8   A0A195BEN0   A0A158NKK8   A0A151WEM9   A0A1B6DPI9   A0A0J7L004   A0A1W4XHF8   F4X379   A0A2M4AP46   A0A182U7J4   A0A182PZY6   A0A182VIF5   A0A182LH67   A0A182HY29   A0A0L7RHT2   Q17GA4   A0A1S4H6E5   A0A310SPI3   A0A1Y1KEI4   A0A0T6ATX4   A0A182IYN9   J3JZD6   A0A0M9A5H7   B0XLA9   A0A084VI03   A0A0K8T4Q4   A0A088AQ58   A0A0A9YH42   A0A2H8TYL3   A0A154P7Q6   A0A182P388   A0A2S2QMQ3   J9K599   A0A182WXF2   A0A182MFP7   A0A2P8XZE3   A0A182N3A3   A0A069DST5   B4M3Z8   A0A2J7QDU2   A0A182RVG0   A0A182W1P5   A0A1J1J013   A0A034W5L3   A0A0K8URJ7   A0A224XFL4   B4K931   A0A1Q3FPZ3   A0A0Q9WC99   A0A3B0K5R4   R4FLL5   A0A1J1HPR2   B4JF21   A0A0A1XDP5   D6X2D0   B4G5D3   A0A0Q9WYL5   A0A034W3X1   A0A0K8VZD3   A0A0M4EPM4   A0A023F7P3   A0A3B0K400   A0A182KH00   A0A1B0CS46   A0A146M601   A0A182FBX6   W8BZ25   A0A0L0C6N2   A0A067RFS8   Q9VE80   T1PIN4   B3NZ64   A0A1J1J3F9   A0A1I8P8Z8   A0A0A1X7Y5   B4QUF1   B4PLB8   A0A336MN15  

Pubmed

19121390    28756777    26227816    23622113    22118469    22651552    + More
26354079    20075255    28648823    20798317    24508170    30249741    21347285    21719571    20966253    17510324    12364791    28004739    22516182    23537049    24438588    26823975    25401762    29403074    26334808    17994087    25348373    25830018    18362917    19820115    25474469    24495485    26108605    24845553    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25315136    17550304   

EMBL

BABH01016712    KZ149936    PZC77138.1    GEYN01000193    JAV44796.1    NWSH01003845    + More
PCG65766.1    JTDY01002030    KOB72275.1    ODYU01003647    SOQ42663.1    GAIX01004371    JAA88189.1    AGBW02014829    OWR41009.1    AK401581    BAM18203.1    RSAL01000165    RVE45291.1    KQ459601    KPI93694.1    KQ460129    KPJ17547.1    GEBQ01017270    JAT22707.1    GECZ01025002    GECZ01017006    JAS44767.1    JAS52763.1    GECU01016890    JAS90816.1    NNAY01000591    OXU27509.1    KQ977151    KYN05278.1    GL440715    EFN65472.1    KQ981606    KYN39592.1    KQ980895    KYN11766.1    KK107250    QOIP01000002    EZA54384.1    RLU25994.1    GL449414    EFN82737.1    KQ976509    KYM82669.1    ADTU01000291    KQ983238    KYQ46262.1    GEDC01009721    JAS27577.1    LBMM01001639    KMQ95961.1    GL888609    EGI59060.1    GGFK01009206    MBW42527.1    AXCN02001120    APCN01004485    KQ414590    KOC70369.1    CH477264    EAT45601.1    EAT45602.1    AAAB01008816    KQ760478    OAD60211.1    GEZM01085981    GEZM01085980    GEZM01085979    GEZM01085978    GEZM01085977    GEZM01085976    JAV59859.1    LJIG01022860    KRT78347.1    APGK01059021    BT128617    KB741292    KB631582    AEE63574.1    ENN70380.1    ERL84491.1    KQ435739    KOX76876.1    DS234386    EDS33797.1    ATLV01013254    KE524847    KFB37597.1    GBRD01005410    GDHC01002213    JAG60411.1    JAQ16416.1    GBHO01012663    GBHO01002098    JAG30941.1    JAG41506.1    GFXV01007598    MBW19403.1    KQ434839    KZC07955.1    GGMS01009768    MBY78971.1    ABLF02036064    AXCM01007670    PYGN01001126    PSN37382.1    GBGD01002103    JAC86786.1    CH940652    EDW59359.1    NEVH01015814    PNF26749.1    CVRI01000064    CRL05140.1    GAKP01009537    JAC49415.1    GDHF01023108    JAI29206.1    GFTR01005159    JAW11267.1    CH933806    EDW14444.1    GFDL01005380    JAV29665.1    KRF78815.1    OUUW01000013    SPP88012.1    GAHY01001333    JAA76177.1    CVRI01000006    CRK88201.1    CH916369    EDV93302.1    GBXI01016837    GBXI01005231    JAC97454.1    JAD09061.1    KQ971371    EFA09879.2    CH479179    EDW24799.1    KRG01019.1    GAKP01009538    JAC49414.1    GDHF01008354    JAI43960.1    CP012526    ALC46097.1    GBBI01001321    JAC17391.1    SPP88013.1    AJWK01025642    GDHC01004443    JAQ14186.1    GAMC01004622    JAC01934.1    JRES01000835    KNC27925.1    KK852714    KDR17887.1    AE014297    AAF55546.2    AHN57389.1    KA648636    AFP63265.1    CH954181    EDV48606.1    CRL05417.1    GBXI01006878    JAD07414.1    CM000364    EDX12451.1    CM000160    EDW95900.1    UFQT01001800    SSX31834.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000283053    UP000053268    + More
UP000053240    UP000002358    UP000215335    UP000078542    UP000000311    UP000078541    UP000078492    UP000053097    UP000279307    UP000008237    UP000078540    UP000005205    UP000075809    UP000036403    UP000192223    UP000007755    UP000075902    UP000075886    UP000075903    UP000075882    UP000075840    UP000053825    UP000008820    UP000075880    UP000019118    UP000030742    UP000053105    UP000002320    UP000030765    UP000005203    UP000076502    UP000075885    UP000007819    UP000076407    UP000075883    UP000245037    UP000075884    UP000008792    UP000235965    UP000075900    UP000075920    UP000183832    UP000009192    UP000268350    UP000001070    UP000007266    UP000008744    UP000092553    UP000075881    UP000092461    UP000069272    UP000037069    UP000027135    UP000000803    UP000095301    UP000008711    UP000095300    UP000000304    UP000002282   

PRIDE

H9JMI5    Q9VE80   

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR036291   NAD(P)-bd_dom_sf       

SUPFAM

SSF51735   SSF51735       

ProteinModelPortal

H9JMI5   A0A2W1BQ73   A0A1Q3G5I9   A0A2A4J204   A0A0L7LA56   A0A2H1VPB2   + More
S4PC03   A0A212EHQ0   I4DJW3   A0A3S2LVK4   A0A194PLT0   A0A0N0PDQ0   A0A1B6LG81   K7IP74   A0A1B6FRX7   A0A1B6IV52   A0A232FAM6   A0A151IL06   E2AM66   A0A195FH86   A0A151IVL0   A0A026WH33   E2BNF8   A0A195BEN0   A0A158NKK8   A0A151WEM9   A0A1B6DPI9   A0A0J7L004   A0A1W4XHF8   F4X379   A0A2M4AP46   A0A182U7J4   A0A182PZY6   A0A182VIF5   A0A182LH67   A0A182HY29   A0A0L7RHT2   Q17GA4   A0A1S4H6E5   A0A310SPI3   A0A1Y1KEI4   A0A0T6ATX4   A0A182IYN9   J3JZD6   A0A0M9A5H7   B0XLA9   A0A084VI03   A0A0K8T4Q4   A0A088AQ58   A0A0A9YH42   A0A2H8TYL3   A0A154P7Q6   A0A182P388   A0A2S2QMQ3   J9K599   A0A182WXF2   A0A182MFP7   A0A2P8XZE3   A0A182N3A3   A0A069DST5   B4M3Z8   A0A2J7QDU2   A0A182RVG0   A0A182W1P5   A0A1J1J013   A0A034W5L3   A0A0K8URJ7   A0A224XFL4   B4K931   A0A1Q3FPZ3   A0A0Q9WC99   A0A3B0K5R4   R4FLL5   A0A1J1HPR2   B4JF21   A0A0A1XDP5   D6X2D0   B4G5D3   A0A0Q9WYL5   A0A034W3X1   A0A0K8VZD3   A0A0M4EPM4   A0A023F7P3   A0A3B0K400   A0A182KH00   A0A1B0CS46   A0A146M601   A0A182FBX6   W8BZ25   A0A0L0C6N2   A0A067RFS8   Q9VE80   T1PIN4   B3NZ64   A0A1J1J3F9   A0A1I8P8Z8   A0A0A1X7Y5   B4QUF1   B4PLB8   A0A336MN15  

PDB

3RD5     E-value=3.21819e-23,     Score=267

KEGG

101737271    no KO assigned | (RefSeq) retinol dehydrogenase 14

GO

GO:0016021   GO:0016491   GO:0005829   GO:0052650  

Length:

340

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.94972

Exp number, first 60 AAs:

23.85421

Total prob of N-in:

0.80450

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  34

outside

35  -  340

 

 

Pi

127.691814

Theta

122.422284

Tajima's D

-0.333821

CLR

0.545922

CSRT

0.285785710714464

Interpretation

Uncertain