SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15548
Pre Gene Modal
BGIBMGA010806
Annotation
PREDICTED:_uncharacterized_protein_LOC106133025_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.531
 

Sequence

CDS
ATGACAACGATTGCAATGCAAAGAGATCTAGTGTTCGCACTGAAAAAAGAAACCAGTCTCAATATTGGTTTATTAAGCAAGTTACATCCGATGTCTGGAGAGTTACTGAAGCAGATTTTTCGCGATAACGCTTTGGAAAAGCCGACACAGAACGTCTTCAATCATGTTTCTCACTATTTGGTGTCGATTATTGACGTTCAAGCTTCCGCGGCGCTACCCTGGCCTTTGTATGATACAAAAACGGAGAGATTGTACAGGAACGAGCTGGCGAACTTCATCTCCGACTACAGCACCAAGGGTCTTCTTACTCCTGTAATGTCCTCATACTTGGTGAACCCTGGATGTTACAAAGTCACAATGCTGATCTTCCAACTGTCCCAACTCGCCGTACAAAAGGTCTTATCGACCAGAATGAAAGATCGACAAAAGAAGCTGTATTATGAGATTACAAATAAGTACAAATTAAATTATAAAGGTTTTGTTCAAGAGGTCACTGTGGCTGCTGAAGTCATGATGAACAAATTTTCCAATTATATCCTCAAGAGGAATACTATGGAGAGGATAGCAGGGTTATTACTGAATAAAATCAAAGAAATGGAGGAAACCCTACAAAAGAGTAATGCTGAGAGATGTATCAATGATATTGTCGATGGCTATATAAATTCAAGACAATTTGATGACAGTACAAAAATGGAATTACTACAAATAAAAAATGTTAAAACGCCATCATTAGTTTTTGACCAGTGGCTAATTCATTTAGATAAAGAAATAGATAATATTGAACAAAAATGGAATGAAAAGGTAACACCCCTTTTAGACACTTGTAGGAGCACGCAAGAAATTTCTAAAGCCTTAATATCGAGGCATTTAGGTGAAGCTGACAAAAATACCTATATTATTGAATACAATCCGAGAACAGACTTTATTTGTACGAAGGAGCTACAAGAACAAGTGAACTGTGAACAGAAATACATATTAAAAAATATTATAAAAGAGGAAAGATTGAGCTTTCCAAATTTAATACGAGGCTTCCTTGTAGCTATGTGTTTTATATTGAAAAACATAGATATCGGTGATGATATATATAAGTTTAATGAATATTTGGATAATGGAAGGATCAATTTTAATGAGCTGGTTATGAATATGAAACTACTGATTGAGAGGGTGGCAAATACGGAGGCGAGATTGCAGCCCTCACCGCTTTTATACAGCCAGTCCATAAAGACGAAGAAACATTTAGAAGTCCCGCCAATACCTAATCTATCAGATTTAAAGGGTAGACGGGACTTACAACAAGAAATATTCTTTAACTCATTCACTCCGATTAGCATTAGCAAACACCAGTTCAATTTGAACAGAAGAAACAGTATATCGCTTACGAAGTATCAGCCTCGGTCACTCTTGGTCACGCCCTTCCACCATCCACCCAAAGACGACTTTCTCAGAAGCATAATATCGTGTCGAATCAGTGCATACGATAATCCGAACACAACTCAAAACTTCCACAACGTTTCTCTCGTGTCTCAGGCTCACAAAATCAACGAAACCATTGCTGAATGTTCAACCGGTTTCACGAAACAACAAATAATGAGACTATTATCAACTAAAAAGAGTACTAGCTCCAAAAAGCACAGGTTTAAACACGACAGGCTCGAGGTAAACATAAAAAAGGGTGCCTTGTTTAATGAATCCAATACGCCTACCGAATGTAGTTCTTTATTTAGGAGTCACTCATCTCCTAATCTATTCGAGAATAGAGAGAAGAAATCACTCCCGAAAGGCGGCAGGAAACTATCGATTATGAGAGAAGATAGTCTTCTAGAAGTGTCTGGTATAGCAGCATTAGACAACAACAGCTGTAACACACCACCGGTCGAATTATCTAGAAATATAGAGGCTTCTAGTCTACCAGTCATCAGTATTGAAGCTGAGAGAAGAGTCAATGAGGTCCTTAAAGATATAGGAAGTGATCCAGAAGAAGACTTTAAATTGATTCATCAAGTAGATCAGCCTAAAGTCACACCAAAGAATACAGTTCAACCCATTAGGAAAACTAGTTCGTTGGAAAAAATCATTAACAGATTCAAGAAAGTACGCGCGAGTGTGTTGCCAACGCAGAAAAATGATTCGGATGAATTTAAAACGATAGTCGAAGAGAAGGAGAATGTAAATTTGGTAAATGTTGATGTTTTCGCAGCAAATAGAGTCTTATTGCCCGATCTATTGAGTCCAAGTTCGAGTGGAATCGCACCTGATTCAAATGATTATTTAGATGAAATATGCTTCGAAATGGATGAGAAAGTGAGGAAGAAACCGCGCGAGAGCTTGGGCACGGCGCTGGGCGTCGACCACACGTTTCTAGATCAATTTGAGTTGGTAGACTGA
Protein
MTTIAMQRDLVFALKKETSLNIGLLSKLHPMSGELLKQIFRDNALEKPTQNVFNHVSHYLVSIIDVQASAALPWPLYDTKTERLYRNELANFISDYSTKGLLTPVMSSYLVNPGCYKVTMLIFQLSQLAVQKVLSTRMKDRQKKLYYEITNKYKLNYKGFVQEVTVAAEVMMNKFSNYILKRNTMERIAGLLLNKIKEMEETLQKSNAERCINDIVDGYINSRQFDDSTKMELLQIKNVKTPSLVFDQWLIHLDKEIDNIEQKWNEKVTPLLDTCRSTQEISKALISRHLGEADKNTYIIEYNPRTDFICTKELQEQVNCEQKYILKNIIKEERLSFPNLIRGFLVAMCFILKNIDIGDDIYKFNEYLDNGRINFNELVMNMKLLIERVANTEARLQPSPLLYSQSIKTKKHLEVPPIPNLSDLKGRRDLQQEIFFNSFTPISISKHQFNLNRRNSISLTKYQPRSLLVTPFHHPPKDDFLRSIISCRISAYDNPNTTQNFHNVSLVSQAHKINETIAECSTGFTKQQIMRLLSTKKSTSSKKHRFKHDRLEVNIKKGALFNESNTPTECSSLFRSHSSPNLFENREKKSLPKGGRKLSIMREDSLLEVSGIAALDNNSCNTPPVELSRNIEASSLPVISIEAERRVNEVLKDIGSDPEEDFKLIHQVDQPKVTPKNTVQPIRKTSSLEKIINRFKKVRASVLPTQKNDSDEFKTIVEEKENVNLVNVDVFAANRVLLPDLLSPSSSGIAPDSNDYLDEICFEMDEKVRKKPRESLGTALGVDHTFLDQFELVD

Summary

Pfam
PF14661   HAUS6_N
Interpro
IPR028163   HAUS_6_N       

Ontologies

GO

Topology

Length:
794
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.43482
Exp number, first 60 AAs:
0.02967
Total prob of N-in:
0.01956
outside
1  -  794
 
 

Population Genetic Test Statistics

Pi
213.033926
Theta
177.493099
Tajima's D
0.621539
CLR
0.739999
CSRT
0.550722463876806
Interpretation
Uncertain
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