Silkworm Genome Informatics Database

Gene

KWMTBOMO15531 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010800

Annotation

PREDICTED:_uncharacterized_protein_LOC101747229_[Bombyx_mori]

Location

Bomo_Chr26(+):1954320-1968061 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.778

CDS

ATGAATTCACATAATTCGTGTGAAGTGTGTGGAAATAAAGACATGGCCTTAATCGATGGTTTTTATTACTGTGTGGAATGTGGTACACAGGACACGAATGTACGAGAAACAGTCGTTGAAAAAAGCATATTCGCTGATGGAACGACTGCGTATAGCACACGAAAAAAAATCTTAAAAATTAGTGAAGATAAAGTTGAAATGACTGGAGAATGGTACAAGTGGCATATATATAACTTTATCCTGTGTGGCTTAGCTGATGAACTTATAGAGCTCGGAGCGAAACCAAGCTTCAAAATGAAACTACTATGGGTATGGTCGAACTACATCAGGAAATATCAAATAAAGGATGACCTCGGATTAACATGTAATATAAATGAAGAGATGCAATCAAAGTTACCAGGAAAAAGCAAAAGCGTTGAAAAAATTCCTTCTGAAAACGATGCAGAGGATAGATCCAATGGAAATAGCGGCTTAGCCACAAATATCAAATTGCAAATAAGTAATGATGATTTGAACAATTGTTATAAAATGCCTGATTATGAATCTATTGTTATGGCATATATTATTGTAGCATTAAAAATATGTTTCGGTTTAGATGATGATTATGAATATAGATTGTCCAAAGCGGTTGATAAGATAAATGAAAATGAAAAATATTGCAAGTCCTACAAGTTAGGTTTTGCATCTAATAAGACTGATAGATTATTTTCCTTTGAAGATTGGATCAAATATTTGCAGTTTCGAAGAAAAATACTGTCAGTTCATTGCATGTTGGACACAGGAGATGAACATTATCTGGATATGGATGATTACATCTATCTAGAGTATTTACCAGATAAACAAAACAACAAAATAGATTTAATCGACGAGCTATCTATGAATATATTAGATAAAATACCGCAAAACAATGACATCAGCATTATCCCTAAAGTGGATTTTGGATACAGTTTAACTCCCTTATCTGCCTACACAGAAGTAATAGCAAATCACAGCACTGATAGTAACCACATTATGTTACTCAGTGAAGAGTTTTCTAAATACTCATTAAAATATACATGTGAGAATCTACAATTGATAGATTTTGATACATCTTCAAATTTAATTAAAGGTGTTGATGTAACCAATAAAGTGATCAGTAACTGTGAGCTTATGGCTTACGATAAAAAACTAAAATACAGTAAAGATATAGAAATGGTAATAGTCAGGAATTGTGACAACAAAAATTGGATTAAAACGAACAAGCCTACTTTAGAACATATTGTTGACGAGAAGAATGAAATTCATGACGAGAAAGCAAGCGATCAGGGATATGACTCGAATGAGAACAGTAGTGACAAAGATGTTCCTACAGAGAGTGTTAGTGTGGTCGAAACTGATAAGTTTGAAACTATTGAGGAAGAAGATGAAGATAAGAATATCTTTGATGATGATTTTTTGGTATACGAAATAAAAACAGAACCCGAGGACTCCGATCATGAGAACATGGATCCACAACGTGACGAGAATGATATTTTTAATGACGATTTCGATGATCGTAACCCAGACATGGATGATAGCAAAAGTGTTCACAGCTACGACTCGTTCGAATTTAATCCAGAAACGTTCAACAGAGAACGGGCCATCAAAGAATTAATCCTCAAAGCGTGCAAAACATATAAAATACCAATACCAAAAGAGTACAGAACCACTGAACCAAGAAAGCGAAAATCAGAGTTCTCCAACAACGAAGCCGGCGTGTCTAAAAGGCGTCGAACAGAAAAACGCGGGGAAGCTAAAATACAAATAAACAAATTATTAGAAGCGTATTATAGTCAAATGGAGAGAGACGTCGTGACTCAAGTCGCGCATGAATTGAAAAATGTCATTTGGAATTTAGAAAATGCTAAAAACGTAACGCAAAATCTCGATGACAAGAGTCACGTGTCCCTTTCAACAGAAACACCAGCAGCCAGTTTCGTCGGCGCCGATGAAGGGGCTCCAAACGATACGAAAAATGAACAGGAAATTGATTCACAAAATACGAGTGCCACAGATTTAAGAACAGGCGAAAACACAACATTACAAGAAACTAAATTGGAAATTGTTGAAGAGAATGAACCAAAATTATTTGATGACGACAGCGATGTTGACGTTGATGAATTAATACCTAAAACGAATCCAAAGTTTGACGAAAACGAATATGATATCAGCCAGTTGTACATGAAGATTGGTAAAATCGAAACCGAGGATATTTGTGACTCGATAAAGGATGCACAATTAACAAAAATCATCGATAAAAATATTGAAGATTATAAAGCAGGAAAAATAATCAAACAATCCAAAGGAGTAGACGAGAGATCTAATGATTCTACCGATTCCGAAGATGAAGTTCCTCTTATTGTATTCAAGGAAGCCAATCTAAAAGAGCCATTGATAAAATTAGAAAGAATACAAGACTTCAAATATTGGTTCAGACATTACAAATATAATTTTATGGTTAAAGCCGATAACAGAAAAGAGAAATTCGAATTTGATTTGATAAAGAACACACCGAAAACGTTTTATTTTTTATTGAAAGAGTGCGCATTAATATCCGACAGTACACCATTTCGTATCTATAAATCTATGAAGGATTCAAAGCATTCGCAAGCTCCTATAGAAGATTTAAGTGAATTACGTAGTTATTTTGCGTCACACAATACTACACGCGAGTACATTGCACATTCATCCAAAGTACATTCCGTGGGCTGGTCCTGTGATGGTAGAAAGCTGGCTTCTGGGTCATTCGATAAAAGCGTTGCAATATTTAATTTAGAGAGGAGTAGATTGAGTCAAGATTTTATTTTCAAAGGCCACACAGGCTCTGTAGATCAACTCTGCTGGCATGCGTCACATCCTGATCTCCTGAGTACAGCGAGCGGAGACAAATCTGTTAGGATATGGGATACACGATCACACAAATGCGCGGCGACAATCCCAACCAAAGGTGAAAACATAAATATAGCATGGTCTCCTAATGGCAACACCATTGCGGTAGGGAACAAGGAAGATTTAGTTTCATTTATCGATACAAAAACTTATAAAGTGGTAACAGAAGAACAGTTTAACTTTGAAGTGAACGAGATATCATGGAATAATACATCGGACTTGTTCTTCCTCACCAACGGACTGGGATGCGTACATATTATGACTTATCCATCTCTAGAATTGCAGACAGTACTGAAGGCGCATCCTGGTACGTGTATCTGCATCGAGCACGACCCAACCGGTAGATACTTTGCTACTGGGTCAGCCGATGCTCTGGTCTCACTATGGGATGTCAATGAACTGGCCTGCTTAAGAGTTTTCTCCAGGTTGGAGTGGCCGGTCCGGACGCTGTCGTTTAGCTTCGACGGCAGGCTGCTGGCGTCCGCGAGCGAGGACCACATCATCGACATCGGAGACACGGAGACAGGGGAGAAAGTAGCAGAGATCCCGGTGTCCGCGTCCACGTTCACGGTGTCGTGGCATCCCGCGCGCTACCTGCTGGCCTTCGCCTGCGAGGACAAGGAGCCGCCCGAGAGGAAACGGGATTTGGGGAATCTCAAACTGTGGGGACTCTCTAGTTCTTAG

Protein

MNSHNSCEVCGNKDMALIDGFYYCVECGTQDTNVRETVVEKSIFADGTTAYSTRKKILKISEDKVEMTGEWYKWHIYNFILCGLADELIELGAKPSFKMKLLWVWSNYIRKYQIKDDLGLTCNINEEMQSKLPGKSKSVEKIPSENDAEDRSNGNSGLATNIKLQISNDDLNNCYKMPDYESIVMAYIIVALKICFGLDDDYEYRLSKAVDKINENEKYCKSYKLGFASNKTDRLFSFEDWIKYLQFRRKILSVHCMLDTGDEHYLDMDDYIYLEYLPDKQNNKIDLIDELSMNILDKIPQNNDISIIPKVDFGYSLTPLSAYTEVIANHSTDSNHIMLLSEEFSKYSLKYTCENLQLIDFDTSSNLIKGVDVTNKVISNCELMAYDKKLKYSKDIEMVIVRNCDNKNWIKTNKPTLEHIVDEKNEIHDEKASDQGYDSNENSSDKDVPTESVSVVETDKFETIEEEDEDKNIFDDDFLVYEIKTEPEDSDHENMDPQRDENDIFNDDFDDRNPDMDDSKSVHSYDSFEFNPETFNRERAIKELILKACKTYKIPIPKEYRTTEPRKRKSEFSNNEAGVSKRRRTEKRGEAKIQINKLLEAYYSQMERDVVTQVAHELKNVIWNLENAKNVTQNLDDKSHVSLSTETPAASFVGADEGAPNDTKNEQEIDSQNTSATDLRTGENTTLQETKLEIVEENEPKLFDDDSDVDVDELIPKTNPKFDENEYDISQLYMKIGKIETEDICDSIKDAQLTKIIDKNIEDYKAGKIIKQSKGVDERSNDSTDSEDEVPLIVFKEANLKEPLIKLERIQDFKYWFRHYKYNFMVKADNRKEKFEFDLIKNTPKTFYFLLKECALISDSTPFRIYKSMKDSKHSQAPIEDLSELRSYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSFDKSVAIFNLERSRLSQDFIFKGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDTRSHKCAATIPTKGENINIAWSPNGNTIAVGNKEDLVSFIDTKTYKVVTEEQFNFEVNEISWNNTSDLFFLTNGLGCVHIMTYPSLELQTVLKAHPGTCICIEHDPTGRYFATGSADALVSLWDVNELACLRVFSRLEWPVRTLSFSFDGRLLASASEDHIIDIGDTETGEKVAEIPVSASTFTVSWHPARYLLAFACEDKEPPERKRDLGNLKLWGLSSS

Uniprot

NA

ProteinModelPortal

NA

PDB

4LG9 E-value=6.87534e-17, Score=218

KEGG

101747229 K15213 TATA box-binding protein-associated factor RNA polymerase I subunit B | (RefSeq) uncharacteri

GO

GO:0005515 GO:0008270 GO:0006468 GO:0004672 GO:0004703 GO:0007165 GO:0006418 GO:0003707 GO:0006281 GO:0006259

Length:

1196

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.29578

Exp number, first 60 AAs:

7e-05

Total prob of N-in:

0.01529

outside

1 - 1196

Pi

247.369136

Theta

202.757111

Tajima's D

0.826982

CLR

0.071128

CSRT

0.605319734013299

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics