Silkworm Genome Informatics Database

Gene

KWMTBOMO15530

Pre Gene Modal

BGIBMGA002258

Annotation

PREDICTED:_uncharacterized_protein_LOC105841800_[Bombyx_mori]

Location

Bomo_Chr26(-):1943024-1944469 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 2.393

CDS

ATGAATAACATAAAGACTGGTGGTGGTGGTCCTTCCTACATCCCCCCTGATGATGTGTTGGACAGGGTGGCTGCATTATTAGGAAGTACTGTAGATGGGTTCACAGTAGCATATGGTGGTGATGCTGAACTAATACCATGTGCCGGCAGTAGTAATGGTGGTGGTGATGAACATGGTTTGGAGGGTGTTATAGATAATGTAATTGATAATGGTGCTGAGGTGTTGGAGTGTAACAGTGGTGTTGAGGTGTTGAAAGAGTGTGTGGTCGAAGACACAGGGCCTTGTTCAGTCACACCACCTAACCCCAAATTTTTACACACTCCCAAAGCCAGCGGTTTCAAAAGAAAATCAAAATTTGATGAGCACCGGGCATCCAGAAACCAGGCAATAGCAAATTACTATAATGCAAAAACAAAACTTTTAGAAGTAAAATTTGAAAATATTGTGTTAGAAAATAAAAAATTAAAATTAGAAATTGATAAACTTAAGAATGTAAATTAA

Protein

MNNIKTGGGGPSYIPPDDVLDRVAALLGSTVDGFTVAYGGDAELIPCAGSSNGGGDEHGLEGVIDNVIDNGAEVLECNSGVEVLKECVVEDTGPCSVTPPNPKFLHTPKASGFKRKSKFDEHRASRNQAIANYYNAKTKLLEVKFENIVLENKKLKLEIDKLKNVN

Uniprot

S4PY81 A0A2A4IVT0 A0A0L7LEI2 H9J5F6 A0A3S2M0J7 A0A2H1VW07 + More
A0A2W1BQQ5

Pubmed

23622113 26227816 19121390 28756777

EMBL

GAIX01003748 JAA88812.1 NWSH01005652 PCG64077.1 JTDY01001465 KOB73800.1 + More
BABH01028201 RSAL01000086 RVE48309.1 ODYU01004776 SOQ45015.1 KZ149995 PZC75447.1

Proteomes

UP000218220 UP000037510 UP000005204 UP000283053

PRIDE

H9J5F6

Pfam

PF13873 Myb_DNA-bind_5

Interpro

IPR028002   Myb_DNA-bind_5        + More
IPR026753   NAIF1
IPR017877   Myb-like_dom

ProteinModelPortal

S4PY81 A0A2A4IVT0 A0A0L7LEI2 H9J5F6 A0A3S2M0J7 A0A2H1VW07 + More
A0A2W1BQQ5

KEGG

105841800 no KO assigned | (RefSeq) uncharacterized LOC105841800

GO

GO:0005634 GO:0006915

PANTHER

PTHR23098

Length:

166

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01196

Exp number, first 60 AAs:

0.01196

Total prob of N-in:

0.14058

outside

1 - 166

Pi

338.112449

Theta

198.097512

Tajima's D

2.147255

CLR

0.000265

CSRT

0.904954752262387

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree