Gene

KWMTBOMO15529

Pre Gene Modal

BGIBMGA010798

Annotation

PREDICTED:_putative_nuclease_HARBI1_[Bombyx_mori]

Location

Bomo_Chr26(+):1941310-1942997      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.647

CDS

ATGGCCGGAACTTTAATGTCTAGTGATAGTGACAGTGATCTTGAAGTGCTGGAGCAGCTTTCAGATTGGGATAATGAGGATACTGATGGAGACGAAGGTCCATCAGGATCACGAAGAAGCTATTGCCGTATTGATTATACTCAGTGCCTAACTGATGCTGAATTTACATTTAGATTTCGTCTTAACAAAGCTGCGGTACAGTTACTTTTATCGGAAATAATGCCACATGTAAAAGTAACCTGCAATCGAAATCATGGAGTTGCACCACTTCACCAGCTACTCCTAACCCTCCGATTTTATGCATTGGGTACAATGCTAATTTCTGTAGCGGATTTCGTGGGCGTGTCAAAATCGACCGCCAGCAGAATAGTTCACGATATATCTGGAGCTATAGCCATACTGTACAATAAATACATTGTAATGCACCCTAATCACGTGGACAAGTTTTTTCAATATGGTCAGTTCCCACGTGTCCTGGGTGCAATTGACTGCACTCACATACGGATACAATCTCCAAATCACACAATAGGCGAAGAGTTCAGAAACCGAAAAGGCTACTTTTCATTAAATGTTCAAGCAGTTTGTGATGCTGATTTGAAGTTTATGAATGTTGTAGCCCGGTGGCCTGGTTCTGCACATGATGCTACTATATTTAATAATTCTGTTTTAAGAGCTCAGTGTGAAGCTGGGACTTTTGGGAATCGCTGGTTGCTGGCTGACAGTGCCTATCCAAACAGATGCTATATGTTGACACCAATTTTAAATCCTAGTGCTAGAAATGAACAAAAATATAATGATGCACATATTGCAACAAGAAACCTTATTGAAAGAACCTTCGGTGTATGGAAGCGACGTTTTCCAGTGATCTCATTATCTATGCGCTTATCACTAGAAAACATTCAGAAAGTTATAATAGCTACAGCAGTTCTACACAACATCTGTAGAATTCATAATTTGCAAGAAACCCCAGCAGAGGTACAAATACCATTCCAAGCAATGGATGATGATGATCTTCAAACTGTGGGAGTACAAGATAGCAGGGATAGAACAGAATTAATAGAAGCCTACTTCTCAACTATGTAG

Protein

MAGTLMSSDSDSDLEVLEQLSDWDNEDTDGDEGPSGSRRSYCRIDYTQCLTDAEFTFRFRLNKAAVQLLLSEIMPHVKVTCNRNHGVAPLHQLLLTLRFYALGTMLISVADFVGVSKSTASRIVHDISGAIAILYNKYIVMHPNHVDKFFQYGQFPRVLGAIDCTHIRIQSPNHTIGEEFRNRKGYFSLNVQAVCDADLKFMNVVARWPGSAHDATIFNNSVLRAQCEAGTFGNRWLLADSAYPNRCYMLTPILNPSARNEQKYNDAHIATRNLIERTFGVWKRRFPVISLSMRLSLENIQKVIIATAVLHNICRIHNLQETPAEVQIPFQAMDDDDLQTVGVQDSRDRTELIEAYFSTM

Uniprot

A0A3S2LMD2   A0A2A4IXD7   A0A0L7L248   A0A0L7L4N7   A0A2H1VXT4   H9JFA0   + More
A0A1Y1M7D0   A0A1Y1MBC4   J9L1W5   A0A1I8NJZ2   J9KF22   A0A0L7LMF9   A0A0L7LEJ9   N6UD62   X1X0S1   J9KLH0   A0A3S2P3B6   J9M943   A0A1Y1MC35   J9JTM0   J9KWE0   A0A3S2KYY9   C4WUD0   J9LL64   A0A1Y1MZ45   J9JZ87   A0A2S2NS44   X1WZQ8   A0A1Y1KLA7   J9JM90   A0A2P8Z014   J9K8M3   A0A1Y1KQW0   J9LYS1   J9M2S7   N6TYP6   C4WVD2   J9JXP4   J9LXS6   A0A1Y1M620   X1XI09   A0A0A9ZIH6   J9KK24   N6TYG1   J9KQN6   A0A2R2MN13   A0A1B6KEC0   J9LUG4   J9M4Q3   A0A0L7LT10   D6WYB2   U4U597   X1WR39   A0A0J7K466   S4PD89   J9JJW2   A0A1S3JPJ3   U4U2V2   J9L523   A0A1Y1KFZ4   J9L1A7   N6TRS6   A0A1Y1N6P0   A0A1Y1KRW4   A0A0A9YXL9   D7EKQ7   J9LUU4   H9JKZ1   A0A158NUI4   J9JZI3   J9LCM8   J9KAY9   A0A146L3K0   J9L0T4   G3NNV5   A0A3Q0J0W5   G3Q0A3   A0A2P8Z808   J9KLG9   G3Q5V2   G3PWP6   A0A2R5LJM8   G3NPN9   G3PAM2   J9LWR9  

Pubmed

26227816    19121390    28004739    25315136    23537049    29403074    + More
25401762    18362917    19820115    23622113    26823975    21347285   

EMBL

RSAL01000057    RVE49808.1    NWSH01005652    PCG64078.1    JTDY01003471    KOB69505.1    + More
JTDY01002978    KOB70380.1    ODYU01004776    SOQ45014.1    BABH01027007    GEZM01038551    JAV81614.1    GEZM01038550    JAV81615.1    ABLF02019815    ABLF02019816    ABLF02061340    JTDY01000543    KOB76728.1    JTDY01001465    KOB73799.1    APGK01040149    KB740975    ENN76582.1    ABLF02020738    ABLF02022234    ABLF02058482    RSAL01001934    RVE40628.1    ABLF02017542    GEZM01035464    GEZM01035462    JAV83213.1    ABLF02029655    ABLF02030019    ABLF02016012    ABLF02055237    RSAL01000416    RVE41817.1    ABLF02006541    ABLF02042859    AK341014    BAH71500.1    ABLF02019988    ABLF02066411    GEZM01017851    GEZM01017841    GEZM01017840    JAV90428.1    ABLF02036739    GGMR01007355    MBY19974.1    ABLF02008641    ABLF02011808    GEZM01080383    JAV62179.1    ABLF02016431    PYGN01000260    PSN49845.1    ABLF02006612    GEZM01076717    JAV63704.1    ABLF02012895    ABLF02011053    APGK01005289    KB736163    ENN83248.1    AK341464    BAH71852.1    ABLF02008545    ABLF02003846    GEZM01039795    GEZM01039794    GEZM01039793    GEZM01039792    GEZM01039791    GEZM01039790    GEZM01039789    JAV81183.1    ABLF02012281    ABLF02058185    GBHO01000839    JAG42765.1    ABLF02038239    APGK01006977    KB737050    ENN83098.1    ABLF02034876    GEBQ01030196    JAT09781.1    ABLF02024993    ABLF02024998    ABLF02025000    ABLF02016385    JTDY01000151    KOB78582.1    KQ971356    EFA09128.1    KB632043    ERL88242.1    ABLF02063305    LBMM01014280    KMQ85248.1    GAIX01003761    JAA88799.1    ABLF02011428    KB631844    ERL86663.1    ABLF02035722    GEZM01088054    JAV58326.1    ABLF02008686    APGK01006027    KB736544    ENN83189.1    GEZM01016480    JAV91267.1    GEZM01078171    GEZM01078169    GEZM01078168    GEZM01078162    GEZM01078161    GEZM01078158    GEZM01078157    GEZM01078155    GEZM01078153    GEZM01078152    GEZM01078149    GEZM01078144    GEZM01078140    GEZM01078137    JAV62920.1    GBHO01005857    GDHC01007230    JAG37747.1    JAQ11399.1    DS497765    EFA11633.1    ABLF02007356    BABH01011318    ADTU01026491    ABLF02007265    ABLF02010299    ABLF02015906    GDHC01016852    JAQ01777.1    ABLF02003216    PYGN01000153    PSN52639.1    ABLF02017360    GGLE01005627    MBY09753.1    ABLF02033619   

Proteomes

UP000283053    UP000218220    UP000037510    UP000005204    UP000007819    UP000095301    + More
UP000019118    UP000245037    UP000085678    UP000007266    UP000030742    UP000036403    UP000005205    UP000007635    UP000079169   

PRIDE

H9JFA0    H9JKZ1   

Pfam

PF13359   DDE_Tnp_4        + More
PF13843   DDE_Tnp_1_7
PF16087   DUF4817
PF05699   Dimer_Tnp_hAT

Interpro

IPR027806   HARBI1_dom        + More
IPR026103   HARBI1_animal       
IPR029526   PGBD       
IPR032135   DUF4817       
IPR012337   RNaseH-like_sf       
IPR008906   HATC_C_dom       

SUPFAM

SSF53098   SSF53098       

ProteinModelPortal

A0A3S2LMD2   A0A2A4IXD7   A0A0L7L248   A0A0L7L4N7   A0A2H1VXT4   H9JFA0   + More
A0A1Y1M7D0   A0A1Y1MBC4   J9L1W5   A0A1I8NJZ2   J9KF22   A0A0L7LMF9   A0A0L7LEJ9   N6UD62   X1X0S1   J9KLH0   A0A3S2P3B6   J9M943   A0A1Y1MC35   J9JTM0   J9KWE0   A0A3S2KYY9   C4WUD0   J9LL64   A0A1Y1MZ45   J9JZ87   A0A2S2NS44   X1WZQ8   A0A1Y1KLA7   J9JM90   A0A2P8Z014   J9K8M3   A0A1Y1KQW0   J9LYS1   J9M2S7   N6TYP6   C4WVD2   J9JXP4   J9LXS6   A0A1Y1M620   X1XI09   A0A0A9ZIH6   J9KK24   N6TYG1   J9KQN6   A0A2R2MN13   A0A1B6KEC0   J9LUG4   J9M4Q3   A0A0L7LT10   D6WYB2   U4U597   X1WR39   A0A0J7K466   S4PD89   J9JJW2   A0A1S3JPJ3   U4U2V2   J9L523   A0A1Y1KFZ4   J9L1A7   N6TRS6   A0A1Y1N6P0   A0A1Y1KRW4   A0A0A9YXL9   D7EKQ7   J9LUU4   H9JKZ1   A0A158NUI4   J9JZI3   J9LCM8   J9KAY9   A0A146L3K0   J9L0T4   G3NNV5   A0A3Q0J0W5   G3Q0A3   A0A2P8Z808   J9KLG9   G3Q5V2   G3PWP6   A0A2R5LJM8   G3NPN9   G3PAM2   J9LWR9  

KEGG

105841876    no KO assigned | (RefSeq) uncharacterized LOC105841876

GO

GO:0016021   GO:0046983  

Length:

360

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.21041

Exp number, first 60 AAs:

0.00012

Total prob of N-in:

0.03932

outside

1  -  360

 

 

Pi

368.701904

Theta

209.822162

Tajima's D

2.484048

CLR

29.994715

CSRT

0.943602819859007

Interpretation

Uncertain