Gene

KWMTBOMO15522

Pre Gene Modal

BGIBMGA010795

Annotation

PREDICTED:_beta-1?4-galactosyltransferase_7_[Papilio_machaon]

Location

Bomo_Chr26(+):1789276-1792880      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.286 PlasmaMembrane   Reliability : 1.32

CDS

ATGTACATTAGTATTAGCTTGATGGGTTACAGGATAACCAACTCAAGATGTCTCGTTTTGTGCGTAATACTAACTTTTGTGATGGGCTGCTATTTAGCATCTTTGCCCATAGAAGAAGAAAAACCAGCATTGCTTAAGCAATCAGTTGCCGAAATTCCTACCATTAATACAAACAAGAAGCGTCTAGCAATCATCGTTCCGTTCCGGGACCGCTTCGAGGAGCTCCTAGAGTTCGTTCCTCACATGACCGCCTTCCTGAAGAGACAAGAAATTCCATTCCACATCTTTGTGGTTCAACAGAAGGACAGCAACCGTTTCAACAGAGCTTCATTGATAAATGTTGGATTCCTGCAGACTCGTAACAATTTCGAATACATGGCGATGCACGACGTTGATCTTCTACCTTTGAACGACAACCTAAAGTATGAATATCCTGAAGCAGGACCATATCATATCTCTTCACCAGACACCCATCCAAGATATTACTACAAAACGTTCATTGGTGGCATACTGTTAATAAAGAGAGAGCATTATGAGCTGGTCAACGGAATGTCCAATAACTACTGGGGTTGGGGGCTGGAAGACGACGAGTTCTACGTGAGATTGAAGGATGCAGGCCTCACAGTTACGAGGCCAAGCAACATTACTACGGGACGAGAGAACACCTTTAGGCACATGCACGATAAGACTTATCGCAAACGCGACATGCGCAAGTGCTACAACCAGCGCGAGGTGACGCGGCGTCGTGACCGCCGCACCGGACTCCATGACGTGGCCCACCGCGTGCTGAGCCTCCACACCCTCACCATCGACGGGCTGCCGCTGACCGTCCTCAACGTGGAGCTCATCTGCGACCGGAACGCGACCCCGTGGTGTCAGTGCCCAGAACCACCTAAACCTAAAAAGACTTGA

Protein

MYISISLMGYRITNSRCLVLCVILTFVMGCYLASLPIEEEKPALLKQSVAEIPTINTNKKRLAIIVPFRDRFEELLEFVPHMTAFLKRQEIPFHIFVVQQKDSNRFNRASLINVGFLQTRNNFEYMAMHDVDLLPLNDNLKYEYPEAGPYHISSPDTHPRYYYKTFIGGILLIKREHYELVNGMSNNYWGWGLEDDEFYVRLKDAGLTVTRPSNITTGRENTFRHMHDKTYRKRDMRKCYNQREVTRRRDRRTGLHDVAHRVLSLHTLTIDGLPLTVLNVELICDRNATPWCQCPEPPKPKKT

Uniprot

H9JMP2   A0A2A4IVI1   A0A3S2LU13   A0A2H1WA90   A0A1E1W143   A0A212EZ58   + More
H9JMP3   A0A0N1ICK8   A0A2A4IVC0   A0A2W1BFI1   E2BNK8   A0A2J7PI40   A0A067QVV9   A0A182L5R8   A0A2M4AJQ8   A0A310SK71   A0A151IKZ1   A0A182TTQ5   A0A182J539   A0A195FHX2   A0A151IVK2   A0A182M291   A0A026WE58   F4X376   A0A151WEJ6   Q170H3   A0A0L7LEQ1   B0X6J8   A0A1J1HPQ6   A0A195BEQ9   A0A182NE87   A0A158NLH9   A0A2M4DL65   A0A1S4FHV9   A0A2M4BVR8   U5ER90   A0A1B6JX31   A0A2A3EB24   A0A232F317   A0A088AQ60   K7J8T5   A0A1Q3FFM7   A0A1W7R8I2   A0A1B6MBL0   A0A182GN55   A0A336M1M5   A0A1B6CJ92   A0A2M3ZC79   A0A1Y1NFZ7   A0A0V0GD08   A0A069DYJ9   A0A0L0C6M0   A0A1B0CMR6   A0A023F434   A0A182K169   A0A182PB48   B4PUZ9   D6X0P7   A0A1I8NF56   B4LX20   B3LWZ2   Q2HPN8   Q2HPP0   B4K7U3   A0A1W4VL56   Q2HPP1   W8BV94   Q2HPP3   A0A034WEA3   A0A3R7MXU4   A0A0K8U4J1   B4NH65   B4K0Z5   A0A0A1WVS4   A0A3B0JXX2   A0A0P4VSM5   E0VV01   A0A1I8NP27   A0A0M4EQ88   A0A0P4VXD1   T1HLB7   A0A182F4E9   Q299T4   A0A0A9Z975   A0A182T624   T1J0Y7   A0A0K8SVC7   A0A1B0BRG9   B4G5Q0   A0A1A9YK92   A0A1A9UN89   Q2HPN9   Q9VBZ9   T1KB34   Q8I6J0   A0A1B0AAB3   N6U3Z6   Q2HPP2   D1H0P4  

Pubmed

19121390    22118469    26354079    28756777    20798317    24845553    + More
20966253    24508170    30249741    21719571    17510324    26227816    21347285    28648823    20075255    26483478    28004739    26334808    26108605    25474469    17994087    17550304    18362917    19820115    25315136    24495485    25348373    25830018    20566863    15632085    25401762    26823975    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    20236943    24052259    26109357    26109356    12215432    23537049    18057021   

EMBL

BABH01016662    NWSH01007018    PCG63133.1    RSAL01000010    RVE53758.1    ODYU01007305    + More
SOQ49970.1    GDQN01010334    JAT80720.1    AGBW02011361    OWR46785.1    BABH01016664    KQ460952    KPJ10365.1    PCG63132.1    KZ150188    PZC72434.1    GL449414    EFN82787.1    NEVH01025129    PNF15988.1    KK852895    KDR14189.1    GGFK01007651    MBW40972.1    KQ760478    OAD60206.1    KQ977151    KYN05280.1    KQ981606    KYN39589.1    KQ980895    KYN11764.1    AXCM01002140    KK107250    QOIP01000002    EZA54390.1    RLU25841.1    GL888609    EGI59057.1    KQ983238    KYQ46260.1    CH477473    EAT40369.1    JTDY01001376    KOB74033.1    DS232416    EDS41481.1    CVRI01000015    CRK90021.1    KQ976509    KYM82672.1    ADTU01000292    GGFL01014087    MBW78265.1    GGFJ01008035    MBW57176.1    GANO01003865    JAB56006.1    GECU01003938    JAT03769.1    KZ288320    PBC28261.1    NNAY01001167    OXU24909.1    GFDL01008688    JAV26357.1    GEHC01000191    JAV47454.1    GEBQ01006703    JAT33274.1    JXUM01014438    KQ560403    KXJ82587.1    UFQT01000292    SSX22899.1    GEDC01023818    JAS13480.1    GGFM01005307    MBW26058.1    GEZM01007671    JAV95006.1    GECL01000248    JAP05876.1    GBGD01002260    JAC86629.1    JRES01000835    KNC27915.1    AJWK01019121    AJWK01019122    AJWK01019123    AJWK01019124    AJWK01019125    GBBI01002968    JAC15744.1    CM000160    EDW98848.1    KQ971371    EFA09998.1    CH940650    EDW67767.2    CH902617    EDV43831.1    AM231261    CAJ77194.1    AM231259    CAJ77192.1    CH933806    EDW16464.2    AM231258    CAJ77191.1    GAMC01003458    JAC03098.1    AM231256    CAJ77189.1    GAKP01005933    JAC53019.1    QCYY01002184    ROT72262.1    GDHF01030700    JAI21614.1    CH964272    EDW84562.1    CH916658    EDV90849.1    GBXI01011672    JAD02620.1    OUUW01000005    SPP80350.1    GDRN01100639    JAI58531.1    DS235797    EEB17207.1    CP012526    ALC46447.1    GDRN01100640    GDRN01100637    JAI58533.1    ACPB03010972    CM000070    EAL27617.1    GBHO01005244    GBHO01005243    GBHO01005242    GBHO01005241    GDHC01020271    JAG38360.1    JAG38361.1    JAG38362.1    JAG38363.1    JAP98357.1    JH431742    GBRD01008652    GBRD01008651    JAG57169.1    JXJN01019088    CH479179    EDW24916.1    AM231260    CAJ77193.1    AE014297    BT044519    AAF56377.1    ACH95293.1    CAEY01001944    AB091099    BAC22695.1    APGK01050286    KB741169    KB632294    ENN73307.1    ERL91664.1    AM231257    CH954182    CAJ77190.1    EDV53764.1    FN568102    CBH40223.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000008237    + More
UP000235965    UP000027135    UP000075882    UP000078542    UP000075902    UP000075880    UP000078541    UP000078492    UP000075883    UP000053097    UP000279307    UP000007755    UP000075809    UP000008820    UP000037510    UP000002320    UP000183832    UP000078540    UP000075884    UP000005205    UP000242457    UP000215335    UP000005203    UP000002358    UP000069940    UP000249989    UP000037069    UP000092461    UP000075881    UP000075885    UP000002282    UP000007266    UP000095301    UP000008792    UP000007801    UP000009192    UP000192221    UP000283509    UP000007798    UP000001070    UP000268350    UP000009046    UP000095300    UP000092553    UP000015103    UP000069272    UP000001819    UP000075901    UP000092460    UP000008744    UP000092443    UP000078200    UP000000803    UP000015104    UP000092445    UP000019118    UP000030742    UP000008711   

PRIDE

H9JMP2    H9JMP3    Q8I6J0   

Pfam

PF02709   Glyco_transf_7C        + More
PF13733   Glyco_transf_7N
PF17862   AAA_lid_3
PF06309   Torsin
PF00004   AAA
PF16450   Prot_ATP_ID_OB

Interpro

IPR003859   Galactosyl_T        + More
IPR027995   Galactosyl_T_N       
IPR029044   Nucleotide-diphossugar_trans       
IPR027791   Galactosyl_T_C       
IPR027417   P-loop_NTPase       
IPR003960   ATPase_AAA_CS       
IPR010448   Torsin       
IPR003959   ATPase_AAA_core       
IPR041569   AAA_lid_3       
IPR003593   AAA+_ATPase       
IPR032501   Prot_ATP_ID_OB       

SUPFAM

SSF53448   SSF53448        + More
SSF52540   SSF52540       

Gene 3D

3.90.550.10    

ProteinModelPortal

H9JMP2   A0A2A4IVI1   A0A3S2LU13   A0A2H1WA90   A0A1E1W143   A0A212EZ58   + More
H9JMP3   A0A0N1ICK8   A0A2A4IVC0   A0A2W1BFI1   E2BNK8   A0A2J7PI40   A0A067QVV9   A0A182L5R8   A0A2M4AJQ8   A0A310SK71   A0A151IKZ1   A0A182TTQ5   A0A182J539   A0A195FHX2   A0A151IVK2   A0A182M291   A0A026WE58   F4X376   A0A151WEJ6   Q170H3   A0A0L7LEQ1   B0X6J8   A0A1J1HPQ6   A0A195BEQ9   A0A182NE87   A0A158NLH9   A0A2M4DL65   A0A1S4FHV9   A0A2M4BVR8   U5ER90   A0A1B6JX31   A0A2A3EB24   A0A232F317   A0A088AQ60   K7J8T5   A0A1Q3FFM7   A0A1W7R8I2   A0A1B6MBL0   A0A182GN55   A0A336M1M5   A0A1B6CJ92   A0A2M3ZC79   A0A1Y1NFZ7   A0A0V0GD08   A0A069DYJ9   A0A0L0C6M0   A0A1B0CMR6   A0A023F434   A0A182K169   A0A182PB48   B4PUZ9   D6X0P7   A0A1I8NF56   B4LX20   B3LWZ2   Q2HPN8   Q2HPP0   B4K7U3   A0A1W4VL56   Q2HPP1   W8BV94   Q2HPP3   A0A034WEA3   A0A3R7MXU4   A0A0K8U4J1   B4NH65   B4K0Z5   A0A0A1WVS4   A0A3B0JXX2   A0A0P4VSM5   E0VV01   A0A1I8NP27   A0A0M4EQ88   A0A0P4VXD1   T1HLB7   A0A182F4E9   Q299T4   A0A0A9Z975   A0A182T624   T1J0Y7   A0A0K8SVC7   A0A1B0BRG9   B4G5Q0   A0A1A9YK92   A0A1A9UN89   Q2HPN9   Q9VBZ9   T1KB34   Q8I6J0   A0A1B0AAB3   N6U3Z6   Q2HPP2   D1H0P4  

PDB

4LW6     E-value=1.07349e-84,     Score=797

KEGG

101735491    K00733 xylosylprotein 4-beta-galactosyltransferase [EC:2.4.1.133] | (RefSeq) beta-1,4-galactosyltran

PATHWAY

00532    Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate - Bombyx mori (domestic silk
00534    Glycosaminoglycan biosynthesis - heparan sulfate / heparin - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016757   GO:0005975   GO:0016021   GO:0005524   GO:0005794   GO:0046525   GO:0030166   GO:0006491   GO:0036402   GO:0046872   GO:0030206   GO:0008378   GO:0015012   GO:0000166   GO:0016787   GO:0030163   GO:0051537   GO:0043565   GO:0003677   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR19300  

Length:

303

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.0312099999999

Exp number, first 60 AAs:

21.00671

Total prob of N-in:

0.96778

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  303

 

 

Pi

324.507022

Theta

203.794709

Tajima's D

1.656712

CLR

0.028026

CSRT

0.822658867056647

Interpretation

Uncertain