SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15515
Pre Gene Modal
BGIBMGA010753
Annotation
hypothetical_protein_KGM_15858_[Danaus_plexippus]
Full name
Ommochrome-binding protein      
Alternative Name
YCP
Location in the cell
PlasmaMembrane   Reliability : 2.37
 

Sequence

CDS
ATGAGATTTTTTAAAGGATCCATATTGTTGACATTGACGTTGTTGGCTACATTCTGGGCTTCATCACTTTCCGTATATGAAGAGACAGTCAGCTGCGACGGAGTCGTATTCCACGACGTTTACTTCGATAAGAAGCTACTCTTCTCGAACTATGGACGGCCGTATAATTTAGTGATGCACAAGTATACTGGGATATTGTTCTTCAGTCACACCATTCAGAATGGAACTTTAGTTGATTTTGTCATTACCGCCTGTCATCTTGAGAAGAACGTCTGTAGGGACATAGCCGGTGTCCCCGGTGGCTATGCTATAGCATACGACTCAAGCAACGATGACATATATTTCGGAGGCCACGACGGTCTATACAAATACAATTTTCTCACGAGATCGGCCGAATTCTTCGCCGAAAAAGGTAAATCTATATGGGGTATATTTATCAAGAGGAATTTTTACTACATCGAGTATCCGGAACAGAAGCTTTATGTATATCAAAACGATGTATTCGTGAAAGTGGCCGAAGCGATTAACATTGAAATAGACAATTTCTTCATATCGAAACACCATGATATATATTTTTCAAACAAAACGGCCCTATATAAGATTGGAAAAACAAAAACAAACGCTATAATAATGAACGATGATGTCTTAATCAGACAAATAGTCGAAGACGGCTACGGAGATGTGTATTTCTGCGGCAGTGACGGAGTTTATCTCGAAGCTAAGCCTTATGTTAAAACTAAAAAGATCGCAGTCGTAGAAAATATGTTCGGGATTACATTCGATGAAAACGATAAAGTGATTTATTCAGACGAACACGCTATTTATAGATTGGAGAATAGTAATTATAGTAAGGAGTGTTTGGATGCGTTGTTGAATGTTAATGAACGGAAATTGGGGTCGAGAGATTTGTTGCTCAGTTGGATGTGA
Protein
MRFFKGSILLTLTLLATFWASSLSVYEETVSCDGVVFHDVYFDKKLLFSNYGRPYNLVMHKYTGILFFSHTIQNGTLVDFVITACHLEKNVCRDIAGVPGGYAIAYDSSNDDIYFGGHDGLYKYNFLTRSAEFFAEKGKSIWGIFIKRNFYYIEYPEQKLYVYQNDVFVKVAEAINIEIDNFFISKHHDIYFSNKTALYKIGKTKTNAIIMNDDVLIRQIVEDGYGDVYFCGSDGVYLEAKPYVKTKKIAVVENMFGITFDENDKVIYSDEHAIYRLENSNYSKECLDALLNVNERKLGSRDLLLSWM

Summary

Subunit
Monomer.
Keywords
Direct protein sequencing   Glycoprotein   Signal  
Feature
chain  Ommochrome-binding protein
EMBL
BABH01016630    KZ150180    PZC72519.1    NWSH01001998    PCG69476.1    AGBW02007955    + More
OWR54376.1    AGBW02011018    OWR47363.1    KQ459895    KPJ19520.1    JTDY01002898    KOB70521.1    PZC72520.1    KPJ19519.1    BABH01026891    JTDY01003236    KOB69904.1    NWSH01001435    PCG71236.1    ODYU01004895    SOQ45238.1    KZ149928    PZC77477.1    AGBW02013802    OWR42795.1    NWSH01000191    PCG78576.1    KQ459562    KPI99756.1    KQ459602    KPI93453.1    KQ461158    KPJ08078.1    KQ460615    KPJ13703.1    JQ003184    AFC35301.1    EF083140    ABK22491.1    JTDY01003234    KOB69909.1    AGBW02009212    OWR51334.1    BABH01030111    JTDY01001487    KOB73748.1    ODYU01012396    SOQ58682.1    JTDY01014199    KOB52046.1    JTDY01001660    KOB73227.1    KQ460423    KPJ14832.1    GDQN01005929    JAT85125.1    KPJ14850.1    AF169311    AAF89672.1    AGBW02015065    OWR40643.1    AK402000    BAM18622.1    KQ459386    KPJ01209.1    KPJ01224.1    GAIX01007995    JAA84565.1    L00975    AY819655    AAV68388.1    AY819653    AAV68386.1    AY819654    AAV68387.1    JTDY01002489    KOB71312.1    AY819652    AAV68385.1    KOB71311.1    AY819651    AAV68384.1    JTDY01011636    KOB54879.1    BABH01034622    ODYU01013195    SOQ59889.1    KZ150334    PZC71338.1    NWSH01004004    PCG65580.1    KPJ01215.1    BABH01034621    OWR42797.1    KPJ14845.1    BABH01026888    KOB69902.1   
Pfam
PF07690   MFS_1        + More
PF00096   zf-C2H2
PF02995   DUF229
Interpro
IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011042   6-blade_b-propeller_TolB-like       
IPR001958   Tet-R_TetA/multi-R_MdtG       
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR017850   Alkaline_phosphatase_core_sf       
IPR004245   DUF229       
SUPFAM
SSF50998   SSF50998        + More
SSF103473   SSF103473       
SSF57667   SSF57667       
SSF53649   SSF53649       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.943067
 
 
Length:
308
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.60736
Exp number, first 60 AAs:
1.41256
Total prob of N-in:
0.07320
outside
1  -  308
 
 

Population Genetic Test Statistics

Pi
252.678249
Theta
194.043733
Tajima's D
0.887543
CLR
0
CSRT
0.625568721563922
Interpretation
Uncertain
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