Silkworm Genome Informatics Database

Gene

KWMTBOMO15506 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010792

Annotation

PREDICTED:_nucleolar_protein_14_[Papilio_xuthus]

Location

Bomo_Chr26(+):921646-928313 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.506

CDS

ATGGCAAAAGTTAAAAACAAGCGGAATTCAGGACTAGCTGATAAAGTTCACAGTAATAGAAAAGCAGAGATCAACAAAAAGAAAATCAATCCATTTGAGGTGCATGTGAATCGTGAAAAAATTAAAGTTTTAGGGAAGAAATCGAAGCATGATAAAGGTTTGCCTGGTGTATCTCGAGCTAAAGCTGTACAGAAGAGAAAAGAGACATTGGGCACAGAAATGAAGCTGATGAATAAGACAAACACATTTATTGATCGTCGTATTGGTGAGAAAAACAACCAGTTGTCAGCTGAAGATAAAATGATTGCGAGATTTGCCGCTGAAAGAGTTAAACAACACAATAAAAAGAGTATATACAATTTGGCAGATGATGAGATATTAACACATAGAGGCCAAACGTTGGAGCAAATAGAAAAGTTTGATGATCCAAGATCTGATGATGAAGATGAAGAAGGAAAGGCATATGGTGGACTAGACTATGACTTTGTTGCTGAAGGCCACTTTGGTGGAGGAATGCTTTCAAAAACTGACTCAAAAGACGGTGCAAAATCTCACAAAGATTTAATAGAGCAGTTAATAGCAGAGTCAAAGAAAAGGAAGGCAGAGAAGCAGAAAGATAAAGAACAGACTTTAGATTTGACAGAAAAGTTAGATAGTGAATGGAAAGATCTTCAACCGGTTGTTTTTAAGAGACCGAGAGTAGAAGAAGAGTCTGCTATTGATAAAGTGCTGAATAAAGCAGAAAAGAATAGTCAGGATTATGATAAGATGATGAGAGAGTTGAAGTTTGAGAAGAGAGGAACGCCTTCAGATGCCCTAAAAAGCGACGAGAAACAAGCAAAAGAAGAGAGGGAAAAGTTAGAGCAGTGGGAGAGAGAACGACAACAGAGAATGACGGGAGATGATGAAGTAATACCTGTAAGGGTTAAACAACCTGCTCCTAAACACAGGTCAGCCGAGGACCTTGATGACAATTTCGAGTTGGAAGACGAGGCTAGTTTTATGTTGGCGTATGATAAGGATGGAAAACCTTTAGTACCAGAACATATTCTTAAAGATTATTCAGTACCAAACGCAAAACCGAAGTTTGAAGATGGCGTTTCGGATACGTCTGATGAAGAAAACAGTGATGATGCTGATGATGAAAGTAACGGTGATGATGATGGAGATAGCGATGAACAAGAAGTGTCGGATGAAGATGCACCTGAAGAGACTACTGATGATGAAAAACATGTCAACGATACCGACAACAAAGGTGCAGCAAAAGAAATAAATGATAACAGAGTTGAGGGAAAGAAACTTGAAGTTGAAAACCTTTCATCACAGTCTGAATCTGAAGAGGATACTGAAGATGAACTAAACGTAAATATAGAAGAGGGAACCAAAGTTAAAGAACCCCAAAAAGTTACAACCCAAATTCAAATTAATAATGTTGATACTTCAGAAGACAGCTCAAACGATATCCCAGAATCTAATGACAAACAGAATGTGCTTAAGATAACTGAAAAAAATTGTATATCAAATAATGTTTCAGCTAAATGTAATGGAAATGTAATTAATGAGAACAATCGTAAGAATGTGGATGATCTGAACGCTTTTAATGATTTGAAATCATCTAGTGATGAGAGTGATGACAGTGATGTAGATGATACAGAAATCGGCGCTATGTTTGAGAAGAGCAATGAAGGTGAAAGTTTAAAGGAATTATTGTCCGGAAAAACACCTTCACAGCAGTATACAGCCATACAGAAACTGATAAAAACATATGATCCCAGCTTAGGCGAGGAGAACAAAGACAAACTGAGTCGCCTATTCGCTCACTTACTACAACACATCAACGATATTTTTACCAATTTAAAAGACGAAGGCTCCGTTATAAAAGCCTTCCTGATATTCGATAGATTAGTACCTCATATGTTTGATCTGGCCAAGCTGAATAAAATTTCAACTAAAAAGTACTTGGTCGATCTGTTGGTAGAAAAGCGAAATAAATATATGAAACGCCCGAAACGTATACCGGATTTGGACACGTTAATATTTTTCAAATTGATCTCGCTGCTGTATCCCACGTCCGACTTTCGGCATCCGGTAACGACGCCATCTTTGTTGTTTATGTCCGAGATTTTGAATCGGTCTAGATTCGACGACGCTTTCTCGATATCAAGGGGATTCTTTGTGACAGCCCTAATTTTAGAATACACTGTTCTGTCAAAACGATTAGTACCGTCCGCGCTGAATTACTTAAGAGGCATTTTATATTATTGTGCGAACACATCAATACTTAATCAAGTACAATTAGTCCCGCCTTTTATGTTACATAAAATGGAGAAGATTCTAAATTTAAACACAGATTGTTCTAAAATGTCGGTCGCGAACAAGATGGCCGCTAAAGATTTGATTCTAGAGAGTGTAGATGATGACTTCAAAATCCGCTGTTTGCTGATCAGTACGGTGATGTTGAAGGAGTTCTTTGACAATTTTAATGAGTTAGAGGCACAGGAATGCATGTTTGAGTATCACATAAAGTTGTTAGCCAGGATCGATACAGAATTGTACCCCAAGAAGGTGGCCAGTGTCGTTTCCGAAGTAAGTCAGTACATGAAAGAGTGCTTAGAAATGAAAACTTACACTCCGTTGTGTAGAGAGAAAAAGATACCCAAAGCTTTGAGGTTGTATGAACCGGATGTGCAGGAGGTTTTCACTGGAAGTAAAGGCTCTAAATTATCAAGAGAACAGGCGGAAGCTGCTCGTTTGAAGACTAAACTAAAGAAAGAGATGAAGGGAGCTCTCCGTGAGATCAGAAGAGACAAGTCCTATATAGCTTCTGTTAAGCTAAAGGAGAAGATGCGCAGTGACAATATAAGAAAAGAAAAGGTAAAACAAATCTACAAAGAGGCGGCCATACAACAAGGAGAATTGAATAAGCTGAAGAGAAGTAAATGA

Protein

MAKVKNKRNSGLADKVHSNRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLDYDFVAEGHFGGGMLSKTDSKDGAKSHKDLIEQLIAESKKRKAEKQKDKEQTLDLTEKLDSEWKDLQPVVFKRPRVEEESAIDKVLNKAEKNSQDYDKMMRELKFEKRGTPSDALKSDEKQAKEEREKLEQWERERQQRMTGDDEVIPVRVKQPAPKHRSAEDLDDNFELEDEASFMLAYDKDGKPLVPEHILKDYSVPNAKPKFEDGVSDTSDEENSDDADDESNGDDDGDSDEQEVSDEDAPEETTDDEKHVNDTDNKGAAKEINDNRVEGKKLEVENLSSQSESEEDTEDELNVNIEEGTKVKEPQKVTTQIQINNVDTSEDSSNDIPESNDKQNVLKITEKNCISNNVSAKCNGNVINENNRKNVDDLNAFNDLKSSSDESDDSDVDDTEIGAMFEKSNEGESLKELLSGKTPSQQYTAIQKLIKTYDPSLGEENKDKLSRLFAHLLQHINDIFTNLKDEGSVIKAFLIFDRLVPHMFDLAKLNKISTKKYLVDLLVEKRNKYMKRPKRIPDLDTLIFFKLISLLYPTSDFRHPVTTPSLLFMSEILNRSRFDDAFSISRGFFVTALILEYTVLSKRLVPSALNYLRGILYYCANTSILNQVQLVPPFMLHKMEKILNLNTDCSKMSVANKMAAKDLILESVDDDFKIRCLLISTVMLKEFFDNFNELEAQECMFEYHIKLLARIDTELYPKKVASVVSEVSQYMKECLEMKTYTPLCREKKIPKALRLYEPDVQEVFTGSKGSKLSREQAEAARLKTKLKKEMKGALREIRRDKSYIASVKLKEKMRSDNIRKEKVKQIYKEAAIQQGELNKLKRSK

Uniprot

H9JMN9

Pubmed

19121390

EMBL

BABH01016570 BABH01016571

Proteomes

UP000005204

PRIDE

H9JMN9

Pfam

PF04147 Nop14 + More
PF03073 TspO_MBR

Interpro

IPR038330   TspO/MBR-related_sf        + More
IPR007276   Nop14
IPR004307   TspO_MBR

Gene 3D

1.20.1260.100

CDD

cd15904 TSPO_MBR

ProteinModelPortal

H9JMN9

PDB

5OQL E-value=4.45929e-20, Score=245

KEGG

101746876 K14766 nucleolar protein 14 | (RefSeq) nucleolar protein 14 homolog

GO

GO:0016021 GO:0032040 GO:0008270 GO:0050567 GO:0051536 GO:0051537 GO:0043565 GO:0003677 GO:0003707 GO:0006281 GO:0006259

PANTHER

PTHR23183

Length:

980

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.62039

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00064

outside

1 - 980

Pi

250.419324

Theta

209.10831

Tajima's D

0.646471

CLR

0.461338

CSRT

0.549622518874056

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics