SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15503
Pre Gene Modal
BGIBMGA010757
Annotation
hypothetical_protein_KGM_09094_[Danaus_plexippus]
Full name
Cilia- and flagella-associated protein 206      
Location in the cell
Cytoplasmic   Reliability : 1.182 Nuclear   Reliability : 1.708
 

Sequence

CDS
ATGCAAAGAGTCAACACGCTCACCACGGCCATCGAAGACACTGTCGTGATCCAAGATGAAACTGGGAACGTATTGATCGATGTTAGAAGAAACAGCGGACTGTCGAATGATGATTACAATGAAATATTTCAATTGTTAGCGTTCAATCGACAGTACGAAGTGTTCACCAGGAAGCTGCTGTGTGACGTGGAGACGATGTTACAGAGAGGAGCGCATTACGTTGACCGAGTGAAGAAGGTTCTCGAAGAGTTACACGATACCGTCAAATATAAAACCGCCGTCCCGACTGTGACAGTCTATCCACTCTTCGCCAAGCTCTGGCAGACTTGGCGAGCCATGCAAAACACCATGTACCTGGTGTCGACGGCGAACCGTCTCATGTCCGTTCTGACCAGCATACAGGAACAAACGAAGATACCGTACAACGTATTGGATATCATGCTTAGTGGCAAAGAGATACTCTCTGACCAGGAACGCATGTGTGGGCGCATCAGTATGGAAGACAGATTATCCCTCGGTGCTTTGAAGAATTATGTCGCGTACGATAGCTTTTCCACACCGAACGATAGATACGTCCAGTTCCTAGGTTTCTGTGCCGTGTGCCTCGGCGTGGGTGCTCTAATCCCGAGCAATATGAAGATCGGTCTTATCAAGTGTCAGGGACGACGTTATGGATTCTGTAGTGTCAAAATGGCGGCCAAATTCAGCAAAGACCCTCAACGGTACGTGAATGAAGTATTGGAATACGCGAGAAACAATCCCCATGTTATAAACCTGCTCAATATTGTGGAAGATGCTTTTAGCGTTAAAGATATTGACAATCTGATAACGAAACACGAACCTAAAACTAAGGTCTCGGATAAGGACATCCAAACAGAAACCCATCCGATAGAAGAGCACATTGAGAGAAATTATTCCTGGGACCTGTGGGAGTGGAAACGTCGAGCGTGCAAATGGGCAACAATAGTGAACAGTCGTACGCATTCGACACAAACTGACTACAGTCACCTGAGGTCCGAGATACATTGCCAAACTTTTGAAAATCGCGACAAATCGCTTCAGACCATGAAGAGTGCCGGAATTAATACGATTCCGAATAAGGTATTCGTTTGGGGCTTGAGGGGTCGAATCGGCGATGGTCAGCACGCAATGAACTTAGGCGTGGAACATAATGTCGAAAAGAAAAAAGAACAAACAGTCTCAGTGTGCACGTGGCCATGTGCGGGATATAATCGCGACGAATCTACTAGCACCGGCTCTCTATCGGACGAATACGTACAGTTTTATAAGCCGGACCTTGTTGAATAG
Protein
MQRVNTLTTAIEDTVVIQDETGNVLIDVRRNSGLSNDDYNEIFQLLAFNRQYEVFTRKLLCDVETMLQRGAHYVDRVKKVLEELHDTVKYKTAVPTVTVYPLFAKLWQTWRAMQNTMYLVSTANRLMSVLTSIQEQTKIPYNVLDIMLSGKEILSDQERMCGRISMEDRLSLGALKNYVAYDSFSTPNDRYVQFLGFCAVCLGVGALIPSNMKIGLIKCQGRRYGFCSVKMAAKFSKDPQRYVNEVLEYARNNPHVINLLNIVEDAFSVKDIDNLITKHEPKTKVSDKDIQTETHPIEEHIERNYSWDLWEWKRRACKWATIVNSRTHSTQTDYSHLRSEIHCQTFENRDKSLQTMKSAGINTIPNKVFVWGLRGRIGDGQHAMNLGVEHNVEKKKEQTVSVCTWPCAGYNRDESTSTGSLSDEYVQFYKPDLVE

Summary

Description
May regulate cilium motility through its role in the assembly of the axonemal radial spokes.
Similarity
Belongs to the CFAP206 family.
Keywords
Alternative splicing   Cell projection   Cilium   Complete proteome   Cytoplasm   Cytoskeleton   Reference proteome   Polymorphism  
Feature
chain  Cilia- and flagella-associated protein 206
splice variant  In isoform 2.
sequence variant  In dbSNP:rs13219364.
EMBL
BABH01016560    BABH01016561    BABH01016562    AGBW02012241    OWR45365.1    NWSH01000657    + More
PCG74987.1    KZ149908    PZC78239.1    ODYU01002556    SOQ40225.1    KQ459601    KPI93665.1    KQ461003    KPJ10010.1    JTDY01000481    KOB76988.1    KQ436026    KOX67555.1    PYGN01000938    PSN39196.1    QOIP01000002    RLU26076.1    KK107323    EZA52577.1    GL445463    EFN89539.1    GL762231    EFZ21783.1    KQ982815    KYQ50231.1    KQ971372    EFA10258.1    KQ977671    KYN00633.1    KQ414940    KOC59228.1    KQ979685    KYN19793.1    KQ981606    KYN39501.1    ADTU01000496    KQ976423    KYM88907.1    GL888633    EGI58717.1    KZ288287    PBC29440.1    AAGJ04035776    GECU01004360    JAT03347.1    GECU01005145    JAT02562.1    GECU01002746    JAT04961.1    GEBQ01023813    GEBQ01012540    JAT16164.1    JAT27437.1    AANG04003966    GECZ01012835    JAS56934.1    AAEX03008507    AMGL01107386    AMGL01107387    AMGL01107388    AMGL01107389    AAFC03120816    BC114126    AAQR03185692    AAQR03185693    AAQR03185694    AAQR03185695    AAQR03185696    AAQR03185697    AAQR03185698    AAQR03185699    AEYP01067418    JH882056    ELR51190.1    KN122596    KFO29414.1    NEDP02000770    OWF55043.1    NDHI03003411    PNJ60170.1    CABD030046499    CABD030046500    CABD030046501    CABD030046502    AK098840    BAC05430.1    AL928738    CH466538    BC058220    AK005650    AEFK01169011    AEFK01169012    AEFK01169013    AEFK01169014    AEFK01169015    AEFK01169016    AEFK01169017    AEMK02000001    DQIR01193757    HDB49234.1    AK306356    BAK63350.1    CAAE01015120    CAG13014.1    AGTP01035939    AGTP01035940    KK735473    KFR14267.1    AK093830    AK292584    AL049697    CH471051    BC035083    AAKN02040916    JH817380    EKC36332.1    MRZV01001796    PIK35871.1    JARO02008549    KPP62583.1    LSMT01000325    PFX20235.1    CM001279    EHH53224.1    JSUE03031499    CM001256    EHH18523.1   
Pfam
PF12018   FAP206
Interpro
IPR021897   FAP206        + More
IPR029026   tRNA_m1G_MTases_N       
Gene 3D

Ontologies

Topology

Subcellular location
  
Length:
435
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
11.91024
Exp number, first 60 AAs:
0
Total prob of N-in:
0.54797
outside
1  -  435
 
 

Population Genetic Test Statistics

Pi
191.326149
Theta
155.943339
Tajima's D
1.63485
CLR
0.200968
CSRT
0.816659167041648
Interpretation
Uncertain
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