Gene

KWMTBOMO15497  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010761

Annotation

PREDICTED:_ABC_transporter_G_family_member_23_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr26(-):731166-808275      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.706

CDS

ATGACCGTCGCTAAAGGCACCATATACGGTCTACTTGGTGCGTCGGGCTGTGGGAAGACCACGCTTCTGTCTTGCATCGTGGGCAGACGGAAATTAAACAGCGGCGAGATATGGGTGCTCGGAGGGAAGCCTGGAACAAAAGGGTCTGGTGTCCCCGGGAAACGCGTCGGCTACATGCCTCAGGAGATAGCTCTGTACGGAGAGTTCACCATCAAGGAGACCATGATGTATTTCGGCTGGATCTTCGGCATGGAGACGAAGGAGATCGTGGATCGTCTTCGGTTCCTGCTAGACTTTCTGGACCTGCCCAGCGAGAACCGAATGGTCAAGAACTTGAGTGGAGGGCAGCAGAGAAGAGTCTCGTTCGCTGTAGCGCTGATGCACGACCCCGAACTCCTGATCTTGGACGAGCCGACGGTCGGAGTGGATCCACTGCTGAGGCAGTCGATCTGGACCCATTTGGTTCGGATCACCAGCTCCGGAGACAAGACCGTTATTATCACCACTCATTATATTGAGGAGGCCAGGCAGGCGCACTGCATTGGTCTGATGAGGAGCGGTCGTCTCCTCGCCGAGGAGTCCCCACAGGCCTTACTTAGAATGTACAGCTGCATATCGTTGGAAGATGTCTTCCTAAAACTATCCAGAAAACAGGGTCAATCGAATCAAGTAGTGGAACTAAACGTGACCGGCGGAGGAGCCCTCGGTCTGAACAAGATGTGTAAGCGCGAGGAGGCGCCCTACGCGGCCGAGGACGGGCAGGTCGTGGGCCTGAACTTCCACCAGTCCAAGGAGGTGCTCATTGTAGACCACGGAGCTGGGTCTAACGGAGACATTCCCGGTAAAGTCACGGAGGTCGTGGCCGCGGAGTGCGAAGACTGCGGGAATTGTTTCAATCTGACGTCGAGAGGGAAGATAAAAGCGTTGATCCAGAAGAACTTCCTGCGCATGTGGAGGAACATCGGCGTGATGCTGTTCATCTTCGTTCTCCCAGTGATGCAAGTCATTCTCTTCTGTCTGGCCATCGGAAGGGATCCGACAGGACTACGGATCGCCGTAGTCAACGAAGACGTGAGGATAATAGACGGCGACTGTCCCTACAACCACACCTGCTCAATGAAGAACCTCTCCTGCCGATACCTGGACAACCTGAGCGACCACATGATAAAGGAGTACTACGCTGATCTGTCGTCAGCGCTGGATGCCGTCCGTCAGGGTGAAGCCTGGGGCGCTCTGTACTTCAATGAGAATTATACGGATTCTTTGGTCGCCAGATTGGCTCTGGCTGACACGGCCGACGAAGAGACGGTGACATCGTCCGAGGTTCAAGTCTGGCTAGACATGTCCAACCAGCAGATCGGACTTATGCTCAACCGGGACATACAGTTCTCGTACAGGGACTTCGCTAAGGGTCTGCTTGAGACGTGCGACTACAACCCGAAGCTGGGCGACATCCCGATCGACTTCATGGACCCCATATACGGGAATAAGAACCCTTCGTTCACAGACTTCGTAGCTCCCGGCGTCATATTAACCATCGTATTCTTCCTCGCCGTGGCCCTGACATCGTCAGCGTTGATCGTGGAACGGATGGAGGGCCTCCTGGACCGATCCTGGGTGGCAGGGGTGTCTCCCGGAGAGATTCTGTTCTCGCACGTCGTCACCCAGTTCGTGGTGATGTGCGGGCAGACGGCGCTGGTGCTCATCTTCATGATATCGGTGTTCGGCGTCAAGAATAATGGGAACATCGTCTTCGTTATCATGCTGACTTTGCTGCAAGGTCTGTGCGGCATGTGCTTCGGGTTCGTGATATCGGCCGCTTGCGAGCTAGAGCGGAACGCGATCCAGCTGGCCTTGGGTTCGTTCTACCCCACGCTGCTGCTGAGCGGGGTGATCTGGCCCATCGAAGGGATGCCCTGGATCCTGCGCTACGTGTCCCTCTGCCTGCCCCTCACCCTCGCCACGAACTCGCTGCGGTCCATCCTGACGCGGGGCTGGCCCTTCACGGACTCGGACGTGTACATGGGCTTCGTGTCGACGTTGGCCTGGATCGCGCTCTTCCTCATCGTAACCCTCACGATCCTGAAATTCAAACGGAATTAA

Protein

MTVAKGTIYGLLGASGCGKTTLLSCIVGRRKLNSGEIWVLGGKPGTKGSGVPGKRVGYMPQEIALYGEFTIKETMMYFGWIFGMETKEIVDRLRFLLDFLDLPSENRMVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWTHLVRITSSGDKTVIITTHYIEEARQAHCIGLMRSGRLLAEESPQALLRMYSCISLEDVFLKLSRKQGQSNQVVELNVTGGGALGLNKMCKREEAPYAAEDGQVVGLNFHQSKEVLIVDHGAGSNGDIPGKVTEVVAAECEDCGNCFNLTSRGKIKALIQKNFLRMWRNIGVMLFIFVLPVMQVILFCLAIGRDPTGLRIAVVNEDVRIIDGDCPYNHTCSMKNLSCRYLDNLSDHMIKEYYADLSSALDAVRQGEAWGALYFNENYTDSLVARLALADTADEETVTSSEVQVWLDMSNQQIGLMLNRDIQFSYRDFAKGLLETCDYNPKLGDIPIDFMDPIYGNKNPSFTDFVAPGVILTIVFFLAVALTSSALIVERMEGLLDRSWVAGVSPGEILFSHVVTQFVVMCGQTALVLIFMISVFGVKNNGNIVFVIMLTLLQGLCGMCFGFVISAACELERNAIQLALGSFYPTLLLSGVIWPIEGMPWILRYVSLCLPLTLATNSLRSILTRGWPFTDSDVYMGFVSTLAWIALFLIVTLTILKFKRN

Uniprot

A0A2W1BZQ6   A0A2A4JA19   A0A0N1INK1   A0A212FLT5   A0A0H3VKA1   H9JMK8   + More
A0A194PLP9   A0A023EV47   A0A1S4G863   Q17AN0   A0A084VEI8   A0A182IRQ6   A0A182P3Y2   A0A182Q700   A0A182UX41   Q7QAJ0   A0A2M4CUM8   A0A182W129   A0A182I952   A0A182M4G5   A0A182TT60   A0A2M4ARM4   A0A182WVH2   A0A182RRS9   A0A1J1IZI7   A0A182YG59   B0WAQ3   A0A1Q3FNR9   A0A1Q3FP32   A0A182FWD5   A0A232FC36   A0A1L8DYR0   K7J6H5   A0A336K4Q9   A0A1B0CMA7   E9IWQ8   A0A151ILT1   A0A182JQB6   A0A154P3U8   A0A0A9YJM1   A0A158NA05   F4WEA7   A0A151WEU6   A0A0A9Y5R6   A0A151IUM7   A0A195FI37   A0A0C9R9Y7   A0A026WIH4   A0A3L8E0Z8   A0A067RI70   E0VBP5   A0A0L7QYQ1   A0A2H8TU48   A0A1B6ILM8   A0A1B6M494   A0A310S9Q0   A0A0G3FE97   A0A1B6M8X9   E2C1L8   A0A158V0H3   J9K0F0   A0A139WBS7   A0A1Y1NJD4   A0A1Y1NFQ0   A0A1Z3FWE1   A0A139WBU4   A0A1W4WF93   A0A1B6DBU3   U5EZR5   B4K7R0   A0A0Q9X3W6   A0A0Q9XEE7   A0A0Q9WN00   B3LV93   A0A0P8YNQ3   A0A0P9CAZ6   B4M194   B4JXS8   A0A0Q9XD15   A0A0Q9X973   A0A034VF11   B4N8Q1   A0A0Q9X5B5   B4HZ08   W8AIT3   W8B731   A0A0K8VIW9   A0A3B0JEI2   A0A182KXV9   B3P5R1   A0A034VFN0   B4PQQ7   A0A1W4W2J8   A0A1W4WD52   A0A0R1E4V5   A0A1W4WEF2   I5AN16   A0A0R1E588   A0A0M4EG09   W5JDV2  

Pubmed

28756777    26354079    22118469    26333918    19121390    24945155    + More
17510324    24438588    12364791    25244985    28648823    20075255    21282665    25401762    26823975    21347285    21719571    24508170    30249741    24845553    20566863    20798317    18362917    19820115    28004739    28610908    17994087    18057021    25348373    24495485    20966253    17550304    15632085    20920257    23761445   

EMBL

KZ149908    PZC78206.1    NWSH01002444    PCG68290.1    KQ461003    KPJ10017.1    + More
AGBW02007729    OWR54659.1    KP260785    AKC96438.1    BABH01016552    BABH01016553    KQ459601    KPI93659.1    GAPW01000273    JAC13325.1    CH477332    EAT43312.1    ATLV01012278    KE524778    KFB36382.1    AXCN02001185    AAAB01008888    EAA08957.4    GGFL01004874    MBW69052.1    APCN01003191    AXCM01005332    GGFK01010093    MBW43414.1    CVRI01000064    CRL05114.1    DS231874    EDS41694.1    GFDL01005796    JAV29249.1    GFDL01005797    JAV29248.1    NNAY01000487    OXU28050.1    GFDF01002652    JAV11432.1    UFQS01000026    UFQT01000026    SSW97683.1    SSX18069.1    AJWK01018516    AJWK01018517    AJWK01018518    GL766597    EFZ14974.1    KQ977104    KYN05824.1    KQ434803    KZC06014.1    GBHO01010337    GBHO01009451    GBRD01007340    GDHC01014585    JAG33267.1    JAG34153.1    JAG58481.1    JAQ04044.1    ADTU01000145    ADTU01000146    ADTU01000147    ADTU01000148    ADTU01000149    GL888102    EGI67545.1    KQ983238    KYQ46326.1    GBHO01016100    GBHO01010341    JAG27504.1    JAG33263.1    KQ980956    KYN11092.1    KQ981606    KYN39654.1    GBYB01005060    GBYB01005062    GBYB01005063    GBYB01005147    JAG74827.1    JAG74829.1    JAG74830.1    JAG74914.1    KK107203    EZA55461.1    QOIP01000002    RLU25698.1    KK852498    KDR22698.1    DS235035    EEB10801.1    KQ414688    KOC63687.1    GFXV01005297    MBW17102.1    GECU01035592    GECU01019890    JAS72114.1    JAS87816.1    GEBQ01009237    JAT30740.1    KQ767877    OAD53261.1    KP343867    AKJ85499.1    GEBQ01007609    JAT32368.1    GL451937    EFN78194.1    KF828806    AIN44123.1    ABLF02035201    ABLF02035202    KQ971372    KYB25372.1    GEZM01003527    JAV96755.1    GEZM01003528    JAV96754.1    KY792990    ASC49547.1    KYB25373.1    GEDC01014139    JAS23159.1    GANO01000296    JAB59575.1    CH933806    EDW16431.1    KRG02121.1    KRG02123.1    KRG02120.1    CH940650    KRF83319.1    CH902617    EDV43625.1    KPU80390.1    KPU80391.1    EDW67505.1    CH916377    EDV90490.1    KRG02119.1    KRG02122.1    GAKP01018587    JAC40365.1    CH964232    EDW81502.1    KRF99463.1    CH480819    EDW53265.1    GAMC01020938    JAB85617.1    GAMC01020936    JAB85619.1    GDHF01018144    GDHF01013480    JAI34170.1    JAI38834.1    OUUW01000005    SPP80794.1    CH954182    EDV53311.1    GAKP01018589    JAC40363.1    CM000160    EDW98396.1    KRK04251.1    CM000070    EIM52351.2    KRK04249.1    CP012526    ALC47216.1    ADMH02001506    ETN62261.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000005204    UP000053268    UP000008820    + More
UP000030765    UP000075880    UP000075885    UP000075886    UP000075903    UP000007062    UP000075920    UP000075840    UP000075883    UP000075902    UP000076407    UP000075900    UP000183832    UP000076408    UP000002320    UP000069272    UP000215335    UP000002358    UP000092461    UP000078542    UP000075881    UP000076502    UP000005205    UP000007755    UP000075809    UP000078492    UP000078541    UP000053097    UP000279307    UP000027135    UP000009046    UP000053825    UP000008237    UP000007819    UP000007266    UP000192223    UP000009192    UP000008792    UP000007801    UP000001070    UP000007798    UP000001292    UP000268350    UP000075882    UP000008711    UP000002282    UP000192221    UP000001819    UP000092553    UP000000673   

PRIDE

H9JMK8   

Pfam

PF01061   ABC2_membrane        + More
PF00005   ABC_tran
PF07703   A2M_BRD
PF07677   A2M_recep
PF00207   A2M
PF01835   MG2
PF17791   MG3
PF07678   TED_complement

Interpro

IPR013525   ABC_2_trans        + More
IPR003593   AAA+_ATPase       
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR027417   P-loop_NTPase       
IPR000412   ABC_2_transport       
IPR011626   Alpha-macroglobulin_TED       
IPR036595   A-macroglobulin_rcpt-bd_sf       
IPR008930   Terpenoid_cyclase/PrenylTrfase       
IPR041555   MG3       
IPR013783   Ig-like_fold       
IPR019742   MacrogloblnA2_CS       
IPR002890   MG2       
IPR041813   A2M_TED       
IPR011625   A2M_N_BRD       
IPR001599   Macroglobln_a2       
IPR009048   A-macroglobulin_rcpt-bd       
IPR016024   ARM-type_fold       
IPR028426   Huntingtin_fam       

SUPFAM

SSF52540   SSF52540        + More
SSF49410   SSF49410       
SSF48239   SSF48239       
SSF48371   SSF48371       

Gene 3D

2.60.40.10     2.60.40.690    

CDD

cd02897  A2M_2

ProteinModelPortal

A0A2W1BZQ6   A0A2A4JA19   A0A0N1INK1   A0A212FLT5   A0A0H3VKA1   H9JMK8   + More
A0A194PLP9   A0A023EV47   A0A1S4G863   Q17AN0   A0A084VEI8   A0A182IRQ6   A0A182P3Y2   A0A182Q700   A0A182UX41   Q7QAJ0   A0A2M4CUM8   A0A182W129   A0A182I952   A0A182M4G5   A0A182TT60   A0A2M4ARM4   A0A182WVH2   A0A182RRS9   A0A1J1IZI7   A0A182YG59   B0WAQ3   A0A1Q3FNR9   A0A1Q3FP32   A0A182FWD5   A0A232FC36   A0A1L8DYR0   K7J6H5   A0A336K4Q9   A0A1B0CMA7   E9IWQ8   A0A151ILT1   A0A182JQB6   A0A154P3U8   A0A0A9YJM1   A0A158NA05   F4WEA7   A0A151WEU6   A0A0A9Y5R6   A0A151IUM7   A0A195FI37   A0A0C9R9Y7   A0A026WIH4   A0A3L8E0Z8   A0A067RI70   E0VBP5   A0A0L7QYQ1   A0A2H8TU48   A0A1B6ILM8   A0A1B6M494   A0A310S9Q0   A0A0G3FE97   A0A1B6M8X9   E2C1L8   A0A158V0H3   J9K0F0   A0A139WBS7   A0A1Y1NJD4   A0A1Y1NFQ0   A0A1Z3FWE1   A0A139WBU4   A0A1W4WF93   A0A1B6DBU3   U5EZR5   B4K7R0   A0A0Q9X3W6   A0A0Q9XEE7   A0A0Q9WN00   B3LV93   A0A0P8YNQ3   A0A0P9CAZ6   B4M194   B4JXS8   A0A0Q9XD15   A0A0Q9X973   A0A034VF11   B4N8Q1   A0A0Q9X5B5   B4HZ08   W8AIT3   W8B731   A0A0K8VIW9   A0A3B0JEI2   A0A182KXV9   B3P5R1   A0A034VFN0   B4PQQ7   A0A1W4W2J8   A0A1W4WD52   A0A0R1E4V5   A0A1W4WEF2   I5AN16   A0A0R1E588   A0A0M4EG09   W5JDV2  

PDB

4YER     E-value=2.70383e-25,     Score=289

KEGG

101745694    no KO assigned | (RefSeq) ABC transporter G family member 23

GO

GO:0043190   GO:0055085   GO:0016887   GO:0005524   GO:0004866   GO:0005615   GO:0016021   GO:0015408   GO:0042335   GO:0031410   GO:0006810   GO:0016020   GO:0005634   GO:0043565   GO:0003677   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR10170  

Length:

700

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

156.26475

Exp number, first 60 AAs:

0.689219999999999

Total prob of N-in:

0.05328

outside

1  -  320

TMhelix

321  -  343

inside

344  -  503

TMhelix

504  -  526

outside

527  -  552

TMhelix

553  -  575

inside

576  -  581

TMhelix

582  -  604

outside

605  -  613

TMhelix

614  -  633

inside

634  -  639

TMhelix

640  -  658

outside

659  -  672

TMhelix

673  -  695

inside

696  -  700

 

 

Pi

213.615896

Theta

151.104674

Tajima's D

0.853309

CLR

0.256797

CSRT

0.615569221538923

Interpretation

Uncertain