SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15489
Pre Gene Modal
BGIBMGA010786
Annotation
putative_Rho-associated_protein_kinase_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 2.457
 

Sequence

CDS
ATGATCAAAAGGAACGGTGATAATGTGTTTGCGATCGCGTCGACCAACAATCAGTGTCAAGGCGGCAGCAGAAACGCTGTCTCGCTCTGTCCCAGCGGCGCGGCGACGAGGATACCGCGAGCCACTGCCGCCAGGATGACGCCGCCCGACGCGCACCACAACTCCAAGGAGGCTAACATCGCTCTCTCGATTTACGTCGAAAAGTGGAAAAACAGATATGAAGATGCTGAAAGGAAACATAAAGCGTATCTACTCAAATCCGAAAAAGCGAAACGCGAGCACGATGACCTCCAGCGTCGCTACAACATCTTGCACGAAGAAAGAAACCACCTGGACTCGGAGTTACGAGAGAGAGAACGCGAGCTGAACAAGCTGAAGAATGTCTCCGAAAAGCTATTCAACGAGTACCAGCAGCTGAAGCATCAGCACGAGGTCGACGCGGGTGTCATGCACAAAGTGATGCAACAGGCGGGCGAGTGGTACAAGCAGAACAAGCAGCTCAAGCGGCGCAGCACCGTGCTGATGCAGGCCTTGCCCGTCCCGCCCGTCGACATCGACCTCACCGACACCACCGACACCGCGTCAGACACGAGCAGCAACGAGGAAGTGGAGTTCCTGAAGCAGACCGTCACGGAGCTGAGCAGGCAGATCGCGTCGCTGCAGACAGACCTCAACACCGCCAAGCTACAAGAGTTTGAGGCTCACGAAGCCAACGTGGCTCTGTCGCAGGAAGTAGAAACAGAGAAAGAAAAGCGTCTGGCGCAAGAGAAGGAGCTGCAGGACTTGAGGGTTCAGTTGGAGAGACACAACCGCGTGTCGAAGCTGCTGATGGACGAGGTGTCAGCCTTGAAGGAGAATGCGGATAAGGACAGAGAAATGGCTGAAACGTACCGGTCGGAAGCCCGCGCGGCCAAGAAGCGCGCGGTGGTGTTGGCGCACCAGAGCGCGCTGCTGACGGGCGAGCTGCCGCCGGACGAGCGGCTGGCGCGGCTGCTGCAGGAGCTGGACAGCTTGCGGGACGCGCTGGACGACCAGGCCACGCGCCACCGCGACCAGCTGCACGAGCTGCAGCTGAAACTAGCAGAGAAACATGAGGAGACTGATATCCTGCTGTGGGAGGAGAAGATCCGCTTAGCGGAGGAGGACGCGGAGAAGGCGACGCGGCGCGCGGAGCAGGCCGAGCGGCGCCTGGCGGAGGCCGAGCGACGCCCCGACCTCGCCGCGCGGACACTGCGCGACGCCGAGACCAAGCTGGCGGAGGCGGAGCGGAAGCTGTCGGAGCTGGAGCGCAGGGGGGGGCGGCGCTCGACCCTCATGTCGCGGATCAACTACTTCGAGAACGCGGGCGGAGACAGGAGGGACGTGCAGAGGGAAACAAGAGAACTTCAAGAAGTCAAAGAAGTGGCCGAAGTTGTAGAGATGAGACAAGAAGTCGCGGAAGTCACCGAGCCCTCAGGTTCAGCAGTATCTGCGCGTCCCCCCTCGCCGCCCGCTGTTCCAGAAGTGGCTGAACGTGCCCCCTCGCCGGTCGCGCCCTCCGCTCCCCCCGCCCCGCCGACACAGCTCCCCCCGCCGCCGCCTCCCCCCCCTCCCCCTCCACCGCCCCCGGCAGTGTTCAACGCAGGGCCGACTGAAGACATGGCCAAAATGCTGTCAAACAAACAGGGAACTCTGAAGAGAAGCAAGCAGAACAATGGTGGCGCAATCGACGCTATAGTGGACCAAATCAAAGGAGGGAAATTCCAATTAAAGTCAACCGACCAGAACTTCCTCGAGCGAAAACCCAAAGACGACCAGCCAGAAGCTGTCAAGGAAATGCTGGCCATCCTCGGAACGCTGAGGAAGAGACGCAACGTGAACCGGCCCTGCTTCGTGGCCGGCGCGGAGAAGCACGGCGACGACAGCCTCACGTAA
Protein
MIKRNGDNVFAIASTNNQCQGGSRNAVSLCPSGAATRIPRATAARMTPPDAHHNSKEANIALSIYVEKWKNRYEDAERKHKAYLLKSEKAKREHDDLQRRYNILHEERNHLDSELRERERELNKLKNVSEKLFNEYQQLKHQHEVDAGVMHKVMQQAGEWYKQNKQLKRRSTVLMQALPVPPVDIDLTDTTDTASDTSSNEEVEFLKQTVTELSRQIASLQTDLNTAKLQEFEAHEANVALSQEVETEKEKRLAQEKELQDLRVQLERHNRVSKLLMDEVSALKENADKDREMAETYRSEARAAKKRAVVLAHQSALLTGELPPDERLARLLQELDSLRDALDDQATRHRDQLHELQLKLAEKHEETDILLWEEKIRLAEEDAEKATRRAEQAERRLAEAERRPDLAARTLRDAETKLAEAERKLSELERRGGRRSTLMSRINYFENAGGDRRDVQRETRELQEVKEVAEVVEMRQEVAEVTEPSGSAVSARPPSPPAVPEVAERAPSPVAPSAPPAPPTQLPPPPPPPPPPPPPPAVFNAGPTEDMAKMLSNKQGTLKRSKQNNGGAIDAIVDQIKGGKFQLKSTDQNFLERKPKDDQPEAVKEMLAILGTLRKRRNVNRPCFVAGAEKHGDDSLT

Summary

Interpro
IPR024849   Shootin-1       

Ontologies

Topology

Length:
637
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00334
Exp number, first 60 AAs:
0.00334
Total prob of N-in:
0.00098
outside
1  -  637
 
 

Population Genetic Test Statistics

Pi
184.049488
Theta
168.539966
Tajima's D
0.440246
CLR
0.649993
CSRT
0.498125093745313
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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