SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15483
Pre Gene Modal
BGIBMGA010767
Annotation
PREDICTED:_trichohyalin_[Bombyx_mori]
Full name
Dynein assembly factor 1, axonemal homolog      
Location in the cell
Nuclear   Reliability : 3.22
 

Sequence

CDS
ATGACTAATAAAGACGAAAAATTTAATGATCCATCTTATTTAGAGTTAAAACGTAAAGAGCTGGAAGTATTCTTTCAAGATCTCAAATTGCCCAAAGAGGTAATAGAAAAAGCTATTCAAAATGAATTAAAGCCATTAATACTTGAGGACCGACCATACATTGCAGCTTCCGCTCTAGGTGAAGTAAAATCAGAATACGATGTGATGACCGGTCAACCTTTTACCAAATTTGAAGAATGTAATAGACCATTAACATCAGAAGAAATAAAAGAATTATTAAAAGATAGCCAGGTAATAGCCGAAAAATCTAAACAAATTCAAATCATGATAGATAGAGAGAAACGCAGTGAAATAGTTGTTCCAATAGAAGAAATAAAACTGCCTGGTTATGAAGATATGAGAAAGGAAATTGACAGTGCTTCTAGTAGTTCGGAAGTTAATAAAATTAACTATAAAAATATGGCTTCTTTATTGCATTCCGTTAATGCATATGAAGTTAAATGTTTGAAGGCTACTATTAATCCGAAAAGTGAAAAAAATAAAGAGAATTCAGAATCTGACTCTGATGAAAAAGATTTGGAAGCCATTGAGAAAGTCGTCAGTCAATATTCTGAAAAGTCTTACGAGACTAGATATCAAGAGACAAAAGATATGCTATTAAAATTAGCAGACAGATACGAAGATCCCAACGCAGACCAAAGTGATGCAATATTTACTCCGGATATAAAGAATGCTAAAATTCTAAAAGAATCTTCAGTACAACTTGTAAAAGGTCAAAAAAGACGCTCGGCCTTTGAAGAGGTCAAGGAGAGTTACTCAATCAATGCAGCCATGAATATATCTTTGACCGATAATCCAGTTAAACCTAACCTGAGTGGAGAAGTAAAGAAAGTGACTGCTAATAAAATAGAGGAAGAAAATATTAGTTACGAAGAAGTATTCCCCAAAACTTTTGAAGCTAAACTTAAAGATACTGAAAAAGCTTTACGCGATATTAATTCTGTGTTAAATAACGCTTCGGTAACTGAAAATTCTTTACGAAATTCACCGAACACAAACGAAATTCAATCTAAGTCGGAAAGAGAAAATACATCACAGAAGTTTGATGAAAATATGGAACAAACCTTACAAACAGCTTTAGAGGACATATTCCAAATCGACAAACAAAATCGAGAGAACAAGGATATGGAATTCAAGGAAATGAAGAGCTTAGCGCGAAATATTGTCGAAGGTGCCGAAAATCTGAGCACGTTGATACGTGAAGATATCACAAACAAATTGAACAGTATGAACGAACTGCTAAACGATGTGAATGAAGCTTTAGAGAATTCTAGGAAATCTAACATTGCCTATCAAAAAATTAAAGAAGAGGGTGATATTTTGAAGAGACGACGAGAAGTTTCAATTGTACCCAGAGAAAACATAAATGTACCAGAAGTAGTAAGTCCAACGGTTTCATCTGCTGACATAGACGATATTAACTCAGCTATTTGTAATTTAAACGCAGAGATAAACCACCACGAGGATAGAATAAACAAATGCAAAGAATCTTACGAAATCAGGAATGAGGAATGCAAAACGTTTATCAAAGAGGTTGATGATATTATGATTAAATCTCGTCAAATTTTACATCCGCTCCAAAATGACGTAACAATAAAAGAAGAAAAAGATATTAAAGAGACAAAGAAAGAACAAGCGTTCAGAAAAACAAGTTCGGATGAGATGAAAGAGAATAACGCAGAAGACCATGCCCGTAAAGAACTGTGCAAGAATGAGAAAAATAAGAATTTGGCTGAATTAGAAAATAAGGAATTGGAAAGGAACAATAGAATTAACGATTTGTTATACGAGATTAAAGATAAAATGAAAGATAACAAAGAAGTATTGAGATTAGCTAATAATTTGTTAAGAAGAGAGGAAACCAGGAAGAGTCCTTTAGTTGGGGGTAAAGTGAGAGAGCTGCCAGCATTTGAAATGGATGAGGAGGCTCAGGGAGACCACAAAAGGGAAACTAATATAAGTGTCTGCCCTCCAGATAAGAACGAATTTAACGGTTTTTATTACATCTCTATTATTTTAATATCGCTTAAAATGGTGTAG
Protein
MTNKDEKFNDPSYLELKRKELEVFFQDLKLPKEVIEKAIQNELKPLILEDRPYIAASALGEVKSEYDVMTGQPFTKFEECNRPLTSEEIKELLKDSQVIAEKSKQIQIMIDREKRSEIVVPIEEIKLPGYEDMRKEIDSASSSSEVNKINYKNMASLLHSVNAYEVKCLKATINPKSEKNKENSESDSDEKDLEAIEKVVSQYSEKSYETRYQETKDMLLKLADRYEDPNADQSDAIFTPDIKNAKILKESSVQLVKGQKRRSAFEEVKESYSINAAMNISLTDNPVKPNLSGEVKKVTANKIEEENISYEEVFPKTFEAKLKDTEKALRDINSVLNNASVTENSLRNSPNTNEIQSKSERENTSQKFDENMEQTLQTALEDIFQIDKQNRENKDMEFKEMKSLARNIVEGAENLSTLIREDITNKLNSMNELLNDVNEALENSRKSNIAYQKIKEEGDILKRRREVSIVPRENINVPEVVSPTVSSADIDDINSAICNLNAEINHHEDRINKCKESYEIRNEECKTFIKEVDDIMIKSRQILHPLQNDVTIKEEKDIKETKKEQAFRKTSSDEMKENNAEDHARKELCKNEKNKNLAELENKELERNNRINDLLYEIKDKMKDNKEVLRLANNLLRREETRKSPLVGGKVRELPAFEMDEEAQGDHKRETNISVCPPDKNEFNGFYYISIILISLKMV

Summary

Similarity
Belongs to the DNAAF1 family.
Interpro
IPR032675   LRR_dom_sf        + More
IPR027734   DNAAF1       
IPR001611   Leu-rich_rpt       
Gene 3D

Ontologies

Topology

Subcellular location
  
Length:
699
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00332
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00082
outside
1  -  699
 
 

Population Genetic Test Statistics

Pi
253.676417
Theta
233.008946
Tajima's D
0.320128
CLR
0.344131
CSRT
0.461676916154192
Interpretation
Uncertain
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