Gene

KWMTBOMO15475

Annotation

mariner_transposase_[Bombyx_mori]

Location

Bomo_Chr26(-):328249-328745      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.279 Nuclear   Reliability : 1.654

CDS

ATGGTGGCCACGTTTGTCTCCAAAACCGGCCATGTTACGACTATTCCTCTTGAGGGACAAAGAACGGTTAATGCAGAATGGTATGCTAGCATTTGTTTGCCACAGGTCGTTTCTGAACTCCGTAAAGAGAACTGCAACCGCCGCATCATCCTCCATCACGACAATGCGAGTTCTCACACCGCGCACAGAACAAAAGAGTTTTTAGAGCAAGAAAACATAGAATTATTAGACCATCCGCCGTACAGCCCCGACCTAAGCCCTAATGATTTCTATACTTTCCCTAAAATAAAGAATAAATTGCGTGGACAGAGATTTTCATCACCTGAAGAAGCTGTGGACGCCTACAAAACGGCCATTTTGGAGACCCCAACTTCCGAATGGAATGGTTGCTTCAATGATTGGTTCCATCGTATGGAAAAATGA

Protein

MVATFVSKTGHVTTIPLEGQRTVNAEWYASICLPQVVSELRKENCNRRIILHHDNASSHTAHRTKEFLEQENIELLDHPPYSPDLSPNDFYTFPKIKNKLRGQRFSSPEEAVDAYKTAILETPTSEWNGCFNDWFHRMEK

Uniprot

Q1HPJ3   A0A0J7K8F0   A0A034VN11   A0A1B6G5C6   A0A1L5BY10   A0A069DT60   + More
A0A023F6H6   A0A0V0G5J0   A0A0K8U1A4   A0A267ESW3   A0A0K2VK65   A0A0K2VDK7   A0A1I8HNK7   A0A0K2VCS9   A0A267G4K5   A5WZ66   F4W604   A0A267EV83   A0A1B0CCE3   Q0QXC1   B3CK17   A6GV70   B3CK18   A6GV71   B7ZDI8   A6GV69   B7ZDI6   A0A1W0WCL5   A6GV72   B7ZDI7   B3CK19   B3CK24   B3CK26   A0A1W0X0B6   B3CK30   Q13539   A0A2P6KLU2   B3CK29   A0A0R3NWT8   B3CK23   A0A034V2R5   A0A2H9T3D9   A0A1W0WHW2   A0A2P6KX37   A0A1B6JDU2   A0A2J7R3C8   A0A2S2RAU4   A0A2J7RS37   A0A1L5BY07   A0A023F6W4   A0A1W0WPR3   A0A2J7Q9R7   A0A2J7R7K0   E2ADI9   A0A023F6P2   A0A2S2QMC5   A0A085LTR8   A0A0J7K1H8   A0A1L5BY05   V5GGS5   X1XD14   X1X2D9   A0A224XRB4   A0A1I8HUP2   A0A3Q2GQF1   A0A224XTA3   A0A1L5BY09   A0A0J7KB73   A0A2J7Q7P5   A0A085MS59   A0A0K2UGY4   A0A1L5BXZ8  

Pubmed

25348373    25527032    26334808    25474469    26392545    17562187    + More
21719571    17201767    18455443    17490833    8630486    9461396    15632085    17994087    29150518    20798317    24929829   

EMBL

DQ443409    ABF51498.1    LBMM01012006    KMQ86491.1    GAKP01015435    JAC43517.1    + More
GECZ01012256    JAS57513.1    KX930998    APL98291.1    GBGD01001983    JAC86906.1    GBBI01001865    JAC16847.1    GECL01002811    JAP03313.1    GDHF01031817    JAI20497.1    NIVC01001798    PAA63957.1    HACA01033482    CDW50843.1    HACA01031034    CDW48395.1    HACA01030754    CDW48115.1    NIVC01000557    PAA80943.1    DQ197023    ABB02168.1    GL887696    EGI70382.1    NIVC01001731    PAA64652.1    AJWK01006655    DQ174779    ABA55502.1    AM906133    CAP20047.1    AM231070    CAJ76984.1    AM906135    CAP20049.1    AM231072    CAJ76986.1    AM231082    CAJ76996.1    AM231069    CAJ76983.1    AM231079    CAJ76993.1    MTYJ01000134    OQV12893.1    AM231074    CAJ76988.1    AM231080    CAJ76994.1    AM906136    CAP20050.1    AM906142    AM906144    CAP20056.1    AM906145    CAP20059.1    MTYJ01000027    OQV20875.1    AM906154    CAP20068.1    U49974    AAC52011.1    MWRG01009041    PRD27309.1    AM906153    CAP20067.1    CH673509    KRT05544.1    AM906141    CAP20055.1    GAKP01022166    GAKP01022163    JAC36789.1    NSIT01000395    PJE77748.1    MTYJ01000099    OQV14798.1    MWRG01004032    PRD30899.1    GECU01010428    JAS97278.1    NEVH01007822    PNF35315.1    GGMS01017861    MBY87064.1    NEVH01000595    PNF43644.1    KX931001    APL98294.1    GBBI01001742    JAC16970.1    MTYJ01000064    OQV17200.1    NEVH01020956    NEVH01016344    NEVH01006723    NEVH01003746    PNF20350.1    PNF25331.1    PNF37025.1    PNF40184.1    NEVH01006731    PNF36801.1    GL438759    EFN68500.1    GBBI01001812    JAC16900.1    GGMS01009487    MBY78690.1    KL363296    KFD48364.1    LBMM01017269    KMQ84139.1    KX930994    APL98287.1    GALX01005282    JAB63184.1    ABLF02006437    ABLF02005939    GFTR01005334    JAW11092.1    GFTR01005237    JAW11189.1    KX930999    APL98292.1    LBMM01010330    KMQ87532.1    NEVH01017441    PNF24604.1    KL367699    KFD60055.1    HACA01020102    CDW37463.1    KX930995    APL98288.1   

Proteomes

UP000036403    UP000215902    UP000095280    UP000007755    UP000092461    UP000001819    + More
UP000235965    UP000000311    UP000007819    UP000265020   

PRIDE

Q1HPJ3    Q13539   

Pfam

PF13358   DDE_3        + More
PF17906   HTH_48
PF01359   Transposase_1
PF00059   Lectin_C

Interpro

IPR038717   Tc1-like_DDE_dom        + More
IPR041426   Mos1_HTH       
IPR001888   Transposase_1       
IPR039043   ZFPL1       
IPR012337   RNaseH-like_sf       
IPR032675   LRR_dom_sf       
IPR016186   C-type_lectin-like/link_sf       
IPR001304   C-type_lectin-like       
IPR033989   CD209-like_CTLD       
IPR018378   C-type_lectin_CS       
IPR016187   CTDL_fold       

SUPFAM

SSF53098   SSF53098        + More
SSF56436   SSF56436       

Gene 3D

3.80.10.10     3.10.100.10    

CDD

cd03590  CLECT_DC-SIGN_like

ProteinModelPortal

Q1HPJ3   A0A0J7K8F0   A0A034VN11   A0A1B6G5C6   A0A1L5BY10   A0A069DT60   + More
A0A023F6H6   A0A0V0G5J0   A0A0K8U1A4   A0A267ESW3   A0A0K2VK65   A0A0K2VDK7   A0A1I8HNK7   A0A0K2VCS9   A0A267G4K5   A5WZ66   F4W604   A0A267EV83   A0A1B0CCE3   Q0QXC1   B3CK17   A6GV70   B3CK18   A6GV71   B7ZDI8   A6GV69   B7ZDI6   A0A1W0WCL5   A6GV72   B7ZDI7   B3CK19   B3CK24   B3CK26   A0A1W0X0B6   B3CK30   Q13539   A0A2P6KLU2   B3CK29   A0A0R3NWT8   B3CK23   A0A034V2R5   A0A2H9T3D9   A0A1W0WHW2   A0A2P6KX37   A0A1B6JDU2   A0A2J7R3C8   A0A2S2RAU4   A0A2J7RS37   A0A1L5BY07   A0A023F6W4   A0A1W0WPR3   A0A2J7Q9R7   A0A2J7R7K0   E2ADI9   A0A023F6P2   A0A2S2QMC5   A0A085LTR8   A0A0J7K1H8   A0A1L5BY05   V5GGS5   X1XD14   X1X2D9   A0A224XRB4   A0A1I8HUP2   A0A3Q2GQF1   A0A224XTA3   A0A1L5BY09   A0A0J7KB73   A0A2J7Q7P5   A0A085MS59   A0A0K2UGY4   A0A1L5BXZ8  

PDB

3F2K     E-value=1.16901e-11,     Score=162

KEGG

100101184    K11433 histone-lysine N-methyltransferase SETMAR [EC:2.1.1.43] | (RefSeq) mariner transposase

GO

GO:0008168   GO:0006313   GO:0004803   GO:0030246   GO:0016021   GO:0003676   GO:0008270   GO:0007608   GO:0016020   GO:0030145   GO:0043565   GO:0003677   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR12981  

Length:

140

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00093

Exp number, first 60 AAs:

0.00093

Total prob of N-in:

0.23775

outside

1  -  140

 

 

Pi

21.818388

Theta

41.461952

Tajima's D

-1.377766

CLR

0

CSRT

0.0756962151892405

Interpretation

Uncertain