SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15469
Pre Gene Modal
BGIBMGA010779
Annotation
PREDICTED:_protein_Skeletor?_isoforms_D/E_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.24
 

Sequence

CDS
ATGTGCAACTGTTGCATAACGACGTGTGACAGCAAAAGCTCGGCGGAGGCGCGCGCGCCTGCAGTCGGTCGCGAGCGCACGGCCACAGCACACGCCGCTCTCTGCTGTCAGCCGACTACACCGCCTACACCCACTACACCGACTACACTGTCTACTGAGTGTCCCGGGATGGGGTCGAGGAGCATCGCGCTGCTGCTGGCGCTCGGTATTGCTGGTGGCTTCGCTCAAGCACGGTACTATGGCAAGGACCTGGGTCCGCTCTCACAGCTCCACCACGGAGTGCGGGGCAGGGTGTACGCTGTGGACTCCAAAACTCTGTTTATTCAAGATTTCCACTACGATGGAGAGGGACCTGCTGCATACTTCTACGTGGGCAAGTCCAAAAGTCCGGACGCCGCGGGGGCAACGCGGCTGCGGGACGAGCGGGGCGGGGCGGGGGCGCTGCGGCGGTACCGCGGGGAGCCCGTCACCATCTCTCTCTCTGACGGACTCACTCTCAAGGACATCCGCTGGTTCTCTGTCTGGTGCGACGAATACGCGGTGAACTTCGGCGACGTGAGCATCCCCCGCGACCTGGACTACCCTAAGCCGGCGAAGGTTGGAGCGCTGCGCGGCATCCACGGCGTCTCCTCCGACCAGATCATCGTGGTGGATGCGCAGACACTGCTCATCACTAATTTCTCTTACGACGGAGAAGCTCCAGACGCGAAGTTCTGGGTGGGTCGCGGAGACCAGCCCTCACCGCAAGGCATCCGCATCCCCGACGAGAACGGCAAGGAAGATCCGCTCAGGAAATATGACAAGAAGACCATCGTCCTCACTCTCCCTGGGGATCTGACGGTATTCGACATTGGTCACTTCGGCGTGTGGTGTGAGGCCTTCACAGTGGACTTCGGACACATCACCCTGCCCAGGGCGCAGGTCAGCAACGTGCCGCCCAGCTTGAAGATGTTGGGGGTCTCACCGCAGAGCCGCAACAAGGCGCTGGCAGCCGCCGAGCGCCCCACCCCCAAGCCGACTCGTAAGCCCCTCGCCCGCCTCGACGCCACTACCTACCGCCCTCACCTGCGCCTCGGCACCGGCTTGCTGCAAGCCCTCACAGACCAGCCCGAGGACCACACCTCCCTCCACCGCCGAGCCGACGACTATACGCCGCCCAAACAACAACTAGTGGATGAACCGACCAAGCCGAGCGAGCAAGTGCTACAAGGAGACACCTTTATACACCAGATCACGCCTGTCTACATTCAAGACTTCGAACATCTGAGTCCGGACCAACAGGTCTCGAGACAAGACGAACAACAGCAAGACTACACACAGCAGCATCAACTGGCACCGCAGAACTACTTCCAACAACCGACTCACGATTATTATCGGCGGCAGCTGATCGAGCAACAAGATGCTTACCTCCGGCAGCAGCGGTACCAGCAGATCTCTCAGTACTACCAGGTCACGCCGGCTCAGTACCGGGTGCAGAACGAGCCGTTCCAGTACAGCCTGCTGCCGCGGCAGGCGGGCGGCGCGCGGCCGAGGGGGGGCTCCGATGACCTTGACCCGCGTGCGTCGGGGCTGCAGTTCAAAGACCTGATCTCTTCTGGCGACATTTCAACTGTGTTGCTTCATTATTACAAAGATAATCAATCTAAGTTGAACTGCGAGGTACTAAACGAAGAGTTCGGGTTCGAGGTGCGGTGGGCCATCGCCGGAGACAGCATCGTGCTGCAGCTGGTCGCCAAGCTGGACGACGGAGAGTACATGTCTTTCGGTATCTCGGGGCATCCCTCTCGGGTGCAGATGGTGGGTGGAGACGTGGCCGTGGCCTGGGTAGACAAGGACAGCTTCATGGGATACTCTAAGGATTACTATCTGGATGCGAAGAGTCAGTGCGCCGGAGTTCGAGGGACTTGTCCAGACGAGAGGATTGTTTCGAAGACTAACTCCGTCCGCGTGCTCAACGCAGCCCTGGTGAACGGCTACTCCATAGTGACGTACCAGCGAAGTCTCCGCGCCGCTGATGAACTGGATTTGCCCATCTTCACTAATACTAGCCAGCCGGTCATTTGGGCCATTGGACCTCTCAATTCTAGACTTGAAGCGTCTTATCACCACACCTATCTCAAGGAGGACAAGTTCATTGAATTCGGACGCCCTCCGATGTGGAATTGTCCCATGCCAGAGAGTGAGGATGAGGGGGTTCCCAGTGTAGCGCCTGTCGCCCCGGGACGCCAGCACACGCACGAACACACACACAAGCACAGAGAGCCAGTCCGACCTGAGAGTACAGCTGTAATAAAACCTAATCCGGTGCCGACTCCGAAACCGGTAGCGAAGGTCGTCCCCTGGGAGATCCCTCCGATCCAGTGCTACGAGCCTTCGGACGGTGTGTTCTACGCCCAAATGGGACCCACAGGAGGCAAGCACGGCTACTCAGCTATCACAGGGCACGTCGGCTGGGGTATATCCTGGTACATCAATGGTTTGCTGATCCCGGAAATTAATGTGGTGAGAGGCAAGCAGTACACATTCGTTGTCGAAGGAGGCTCTAACCCTGAGATACCGGCCAAGTACCATCCGTTCTACATCACTAACGATCCTGTAGGAGGCTACTATCACAAGTCTGAGGAGGAGAGGAAGGGAATCCAAATATACGCCGGTGCTCGTCGTCTGCGAAGTGGAGAGGTCACACCAACAGGAGTTGGACGTATTTGCAACTGGACGCCAGATAGCCAAGGACCAGAAGCTGATGAATACCCAAGCTTCGGAGCCTATCAGCGTTCTCTGACCCTGGTCTGTGAGACAGGCGATCCGGGAGTGGTCACCTGGACTCCCGACAGGAACACTCCAGACACTGTCTACTACCAGTGCTTCACCCACCGACATCTCGGGTGGAAGATTAATGTGCTAGACGAGTGTGACGTCGAAGAGGCTGAGGAGAGCCGCGTTGTTGAGTCGTTAGCGCTCCCTGATGACCTGCAGAGTCAGGAATCTATACAGGTACAAAGTAGGGTCGCACCTGACGGCAATATCTTAGATCAGCGAAAAAAATTAGAAAAAATAATGCATACGAAAATGAATTATAACGATTTCAGTAGTTATAAAGATGGCGAGCTCACGGGAGAAGTATACAGGGATGATAGACACCGGTATAAAAACGGACAAGAGTATGAATTGCCGATCAGCAACAATCAAATCAAAGAGGTTATACAAACAGTACAGAGCCTCGAGAGTAAAATGAAGGATGAGATCAAAAAGAACGTGACGCACCCGCAGCAAGTGCACCAGTACCAGGTACACGAGAACGTCAAGGAGATGTTCATGCCCGAGCTACCTATAAGAGAGGAAGATGAATATTTCGTTGAGGCTGGGAAATCCCCTCAAAACTATTTACTTCCGCCAAACCAAAAACCGCTTACTTTACAAAGTGTCTTAAGACCAACAGGACTTAATAGAGTAGTTGGAAACATGAGACCACATTTTAGAAGGCCAGCTCCTCCGGAAATCAAATTACGTCGACCGCCTCCTATGCATCACAAAGTCAATCCTTATCCATTACCAATGCCAAATCCTCACAATTCACATGGAATGAAGAAGCCAAGTCCATCTGCACAGCCAAACCATAAGCAGCCGAATAATAGGCCTATGCCGTTAAATCGACCTCTGCTCCCCAATGTCCCGCCGATGAAGACATTTTCACCACCTCATATTAATAAACCTACGTTCGGTCAGATACACCAGCATCTGCTCAAGAATGACCCTAATCCGACGCAGCAGACTCCTTTATCTACTATTACGGCTAACAATAAACACGGTCCAAATAATATGCACTTGCCAGTGCAGACTTTGAGTGTAGGGCAAAGTGATATTATTGTTAACCAAGTGGTCAAAAGTCAAATCACTCTACCCGGCAGTAATGACGCGATTGCTCAACATAGCATACCACAACCGTATCATAAATCCGGTCAAATAATTTTGGGGAAGCCTATGGAACACCCTGTTCCTTTAGACCAACAAATGATTCAAACCAAACCACACGTCACAAGGACACCTCCAACACCACAGCCCCAGTTCTTCCAAACTTCTAATCCTCGCGTCAAACTAGAAAATGAATTGCTTTCACAAAACGTTATGAAGTCTTCGGATTTTATTGGAGAATCTGTTGACTCTTCTACTCTACCTCCGGCAATGAATACTGGATTCAAACCTGATTCTATTGTTGTTGAAAGTGGATTCAAACCAATAATTCGAGAACCGTTAATGGCGGGCGAAGATAGAATAGCAGAATATGATGGTAATTCAAACAGAAGGGAAGACACAAATGTCGAAGAAGATTATGAAGAATCGCCACAGCCCATTGCAAATCATAAAGTACCTAGTGAAAAAATGACTGAAACATTCGAGCCAATGTTCATTCCTTCACCTCCAGACCATCTCCTCCCCACTAACGATCGGACCAAAGAAGTGTTTCCGAAAAACCACGCTAAAGAAGATAGACCTCATCCTGTCTACGTCAAAAAAGAAAGTGAACTGAATGCACTGTTCGGTAAGAAGAATATGGCAAAAGATGTACCCACAGATATGGTTATGGAATCGAATCGAGTGAGCCCGCACTATTTACCACCAGATCCAAAATTACCAAAAGAGCACTCCCAAAAATTATCAATGAACGAACAGACATTTACTACGTATGATGGTAAGACAGTTTCCGCAGATACTTTAACTAGTGTTCCAAATCTCAATAAAACAACAACAAAATTCTCGGCTAAGTTGCCTGCAAATAGTGAACTACTTTTAAAAACCCCACAATTCGGTCCATTCAAAGGAGAAATCCCACCACCAGTTGCTGCAGATATCATCAAAAGCTCAAGTTCAAATTTTAAAAGTGGTTCATCAGATGATGTTAAAACAACTCACTTAAAACTTGTCAATCTACATAAACCTGAGAAATCCGACGTCGAAGACTTAGTAGCACATGGGAGTGAGAAACACGAAGTTACAGAGGATGGAGAAGAGTTTGAAGAAGAAGAAGAATACGAAGACGAAGAGGACGAGAAGAGAAGCAAACGAGATACAAAGGCGACTCACTTCGAGAAAGGTGAAGCTGTGGAACAAAAGCCAACGAACGGTCACAGTTTACCTATGAACCAAATAGACTATGAGAGTGTTCCTTCATCGGGGTACAAAATGAGACTGCAATGTATCAGTATACTCGTAGTATTAATAGCGACGCGGATTATACGCTTTTAG
Protein
MCNCCITTCDSKSSAEARAPAVGRERTATAHAALCCQPTTPPTPTTPTTLSTECPGMGSRSIALLLALGIAGGFAQARYYGKDLGPLSQLHHGVRGRVYAVDSKTLFIQDFHYDGEGPAAYFYVGKSKSPDAAGATRLRDERGGAGALRRYRGEPVTISLSDGLTLKDIRWFSVWCDEYAVNFGDVSIPRDLDYPKPAKVGALRGIHGVSSDQIIVVDAQTLLITNFSYDGEAPDAKFWVGRGDQPSPQGIRIPDENGKEDPLRKYDKKTIVLTLPGDLTVFDIGHFGVWCEAFTVDFGHITLPRAQVSNVPPSLKMLGVSPQSRNKALAAAERPTPKPTRKPLARLDATTYRPHLRLGTGLLQALTDQPEDHTSLHRRADDYTPPKQQLVDEPTKPSEQVLQGDTFIHQITPVYIQDFEHLSPDQQVSRQDEQQQDYTQQHQLAPQNYFQQPTHDYYRRQLIEQQDAYLRQQRYQQISQYYQVTPAQYRVQNEPFQYSLLPRQAGGARPRGGSDDLDPRASGLQFKDLISSGDISTVLLHYYKDNQSKLNCEVLNEEFGFEVRWAIAGDSIVLQLVAKLDDGEYMSFGISGHPSRVQMVGGDVAVAWVDKDSFMGYSKDYYLDAKSQCAGVRGTCPDERIVSKTNSVRVLNAALVNGYSIVTYQRSLRAADELDLPIFTNTSQPVIWAIGPLNSRLEASYHHTYLKEDKFIEFGRPPMWNCPMPESEDEGVPSVAPVAPGRQHTHEHTHKHREPVRPESTAVIKPNPVPTPKPVAKVVPWEIPPIQCYEPSDGVFYAQMGPTGGKHGYSAITGHVGWGISWYINGLLIPEINVVRGKQYTFVVEGGSNPEIPAKYHPFYITNDPVGGYYHKSEEERKGIQIYAGARRLRSGEVTPTGVGRICNWTPDSQGPEADEYPSFGAYQRSLTLVCETGDPGVVTWTPDRNTPDTVYYQCFTHRHLGWKINVLDECDVEEAEESRVVESLALPDDLQSQESIQVQSRVAPDGNILDQRKKLEKIMHTKMNYNDFSSYKDGELTGEVYRDDRHRYKNGQEYELPISNNQIKEVIQTVQSLESKMKDEIKKNVTHPQQVHQYQVHENVKEMFMPELPIREEDEYFVEAGKSPQNYLLPPNQKPLTLQSVLRPTGLNRVVGNMRPHFRRPAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQPNHKQPNNRPMPLNRPLLPNVPPMKTFSPPHINKPTFGQIHQHLLKNDPNPTQQTPLSTITANNKHGPNNMHLPVQTLSVGQSDIIVNQVVKSQITLPGSNDAIAQHSIPQPYHKSGQIILGKPMEHPVPLDQQMIQTKPHVTRTPPTPQPQFFQTSNPRVKLENELLSQNVMKSSDFIGESVDSSTLPPAMNTGFKPDSIVVESGFKPIIREPLMAGEDRIAEYDGNSNRREDTNVEEDYEESPQPIANHKVPSEKMTETFEPMFIPSPPDHLLPTNDRTKEVFPKNHAKEDRPHPVYVKKESELNALFGKKNMAKDVPTDMVMESNRVSPHYLPPDPKLPKEHSQKLSMNEQTFTTYDGKTVSADTLTSVPNLNKTTTKFSAKLPANSELLLKTPQFGPFKGEIPPPVAADIIKSSSSNFKSGSSDDVKTTHLKLVNLHKPEKSDVEDLVAHGSEKHEVTEDGEEFEEEEEYEDEEDEKRSKRDTKATHFEKGEAVEQKPTNGHSLPMNQIDYESVPSSGYKMRLQCISILVVLIATRIIRF

Summary

Pfam
PF10517   DM13        + More
PF03351   DOMON
Interpro
IPR019545   DM13_domain        + More
IPR005018   DOMON_domain       

Ontologies

GO

Topology

Length:
1747
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
12.74296
Exp number, first 60 AAs:
0.77012
Total prob of N-in:
0.62708
outside
1  -  1747
 
 

Population Genetic Test Statistics

Pi
303.963212
Theta
20.845728
Tajima's D
1.611726
CLR
0.089473
CSRT
0.823258837058147
Interpretation
Uncertain
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