Gene

KWMTBOMO15468

Pre Gene Modal

BGIBMGA010774

Annotation

PREDICTED:_protein_Skeletor?_isoforms_B/C_[Bombyx_mori]

Location

Bomo_Chr26(-):46566-54385      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.566

CDS

ATGTTATGTATTGGTTTCATCTTGTTCATAGGACTTGCTAAAGAATGTTATGCGCAGGATGATAATGGTCCCTACCTAGGACGATCTATTGGCGAGTTTAATACTTACCACCACCAGGTATCAGGTGATGTGTATGCTGTAGATGACTGGACCCTATTACTGGTGAATTTTAACTATGATGGTACTGGAGTTGACACATTCTTCTGGGCTGGAGATTCTGGGAGGCCAGGCCCACAGGGTTTTATAATCCCTGATCAATTTGGCAAAACCAATGTCCTGGAGCGATACTACAATGAGGAAGTACGACTCACACTTCCAGAAGGCAAGCGGATATCCCGAATCAAGTGGTTTGCCGTTTATGATATAGACTCACAGAATGCATTTGGGGATGTGTATATACCTGAAGATTTCTCTGCTCCAGCACCTCAGTCACTAGCAGCATTCTCCTCTGCTGCTGTGACAAGTAAACCTCTGAGAGTACTTGACGCTTCTACCATATTAATACCAGAATTCAGATACGACGGCCGTGGAGAAGAAGCCTACTTTTGGACGGGAGTCGGGCCACAGCCTTCATCACGAGGCTTCAAAATACCTGATGAATATGGATACCTGGAGCCAATCCGCGCGTACAAGGGCGAAGACGTGCGGCTAGAGCTCCCGGGCGGCAAGACCATATTCGACGTGAACTGGATCTCCGTGTACGACGCGTCCGCGCGCGCCAGCCTCGGCGCCGTGCTCGTGCCCGACGGACTCAACGTGCCGCCCGCCGCCCTCGTCACGCACCCGCACGAGAGCAAGTTGAGTCAGTGCAAGCAGCTGCACCGCGACCTCCAGGTCTCGTGGAACGTCCACGGCAGGGAGATCACCATCGAACTCGCGGGACAGATAGAGGAGGACGAGTACATGTCGTTCGGCATCTCCGGCGCGGCGGAGCGCTCCGCCATGCTCGGCGCCGACGTGGCGGTCGCGCGCTACTCCCTCGCAGAGAGGCGCGGCCTCGTCACCGACTACAACATCTCGGACGTGGCGCCGTGCGTGCGCGTGCTGGGCGTGTGGCGCGGCGTGTGTCGCGACACGGCGGTGGGCGGCCTGGACTCCCCGCAGCTGCTGTACGCGTCCCGGGAGGACTCTCTCACGCGCATCACCTACCGCACCAACCAGCAGCCCGACGAGGCTCTGGACCGAGAGTGGAAAAAAGACGGAGACCTTTATGTAGTGTGGGCTGTGGGGAAGCTGGACTCCCTCATGGAGCCCGCCTTCCATCGCCTATATCCGCGCCACGATGTCATCATACGCCTCAACAACACTCTGCCGGATAATGACTGTTTCAAGTTCACCATCGGCAGCAGGGCGCGGCCGAGTCCGTGGGAGGTGGCGCAACTGTTCGACCCCACCCTGCGCGTGTTCCAGTTCCGCGTGGGGCCGGCGGGGGGCGCGCGGGGGGTGGCGGGGCGCGCGGAGGGGCACGCGCCCCCCCTCGCCTGGTACGTCAACGGGCAGCTCGCGCCCGACATCCAGCTGCGCCGCGGACTCACCTACACCTTCTACGTGTACGGGGGCAACGAGCCCCACTCTGCCACTGAGTACCACCCGCTGGTGGTGACGGCGGAGCAGGGCGGCGGCCTGGAGCGCCTCTCGGACTCCGCCCTCCGACAAGTGCGCGTGCTCGCCGGCCTGCACTATTCGCGCCGCGGCCTGCTGCAGCCCACGGCCGCGGGCGGGCTGTGCCTGGGCCGCGCGGCGGAGGAGGCGGACCGGCGGCGGGACGCGGACTACGTGACGTTCCGCGCGTACAACAGGTCGCTGCGGTGGGAGTGCGCGTCGGCGAGCCCGGCCGCGCTCACGGTGTCCCCGAACTCGTCGTGGCCGGACATCGTGTACTACAACTCCTTCACGCACGCAGGCATGGGCGGCCGCATCTACATCGTGGACCGACACAACCGGAACATCGCCCGCAAGAGCGCCGCCGCGACGCTCGCCCCCCTCACCCCCCTCACCGTGCTCACGGCGCTCACCGTGCTCACCGTGCTCACCGCGCTCACGGCCCGGTGA

Protein

MLCIGFILFIGLAKECYAQDDNGPYLGRSIGEFNTYHHQVSGDVYAVDDWTLLLVNFNYDGTGVDTFFWAGDSGRPGPQGFIIPDQFGKTNVLERYYNEEVRLTLPEGKRISRIKWFAVYDIDSQNAFGDVYIPEDFSAPAPQSLAAFSSAAVTSKPLRVLDASTILIPEFRYDGRGEEAYFWTGVGPQPSSRGFKIPDEYGYLEPIRAYKGEDVRLELPGGKTIFDVNWISVYDASARASLGAVLVPDGLNVPPAALVTHPHESKLSQCKQLHRDLQVSWNVHGREITIELAGQIEEDEYMSFGISGAAERSAMLGADVAVARYSLAERRGLVTDYNISDVAPCVRVLGVWRGVCRDTAVGGLDSPQLLYASREDSLTRITYRTNQQPDEALDREWKKDGDLYVVWAVGKLDSLMEPAFHRLYPRHDVIIRLNNTLPDNDCFKFTIGSRARPSPWEVAQLFDPTLRVFQFRVGPAGGARGVAGRAEGHAPPLAWYVNGQLAPDIQLRRGLTYTFYVYGGNEPHSATEYHPLVVTAEQGGGLERLSDSALRQVRVLAGLHYSRRGLLQPTAAGGLCLGRAAEEADRRRDADYVTFRAYNRSLRWECASASPAALTVSPNSSWPDIVYYNSFTHAGMGGRIYIVDRHNRNIARKSAAATLAPLTPLTVLTALTVLTVLTALTAR

Uniprot

A0A212EJ64   A0A2H1WTX1   E0VVB8   A0A194PJN3   A0A2W1BBJ5   A0A1S4G0S6   + More
Q16HF5   A0A1B0CTV7   A0A2M4AAL0   A0A182G7Z6   A0A1B0DQ19   W5JAV9   A0A182PP74   A0A2M4BFU1   A0A0M4EVW7   A0A2M4BFL6   A0A182FAN7   A0A182QZ00   A0A182MQA6   A0A2M3Z490   A0A182W3G3   A0A182SPI1   A0A0L7QL47   A0A182NGF9   A0A2M3ZE23   A0A182JDJ3   A0A182Y8S1   A0A084WP56   A0A182RE39   A0A182K2Q5   A0A182XII5   A0A182HYP4   A0A182VMM3   Q7QA02   A0A1Y1L388   B0X1J7   A0A182KZJ3   D6X2I0   A0A2J7PYU2   A0A154P9T0   A0A0A1XEJ8   A0A0K8VNI7   A0A034VLB8   A0A1I8P161   A0A0R1E237   B4LXU7   A0A182TDM7   A0A1I8N0G7   B4K5C5   F4WUV5   W8B8E7   T1PQ56   B4PKL6   A0A0C9RT20   A0A0L0CJP2   B4G6D2   A0A1B0FN49   A0A1B6LC76   B4HJ91   Q9VH23   B4QVB1   A0A3B0KNI3   B3P4K8   B4JTX3   B3LWS7   B4NA47   A0A195CXL5   A0A1W4W076   A0A195ATX6   A0A1W4VZC8   E2AKF2   A0A1J1HK80   A0A151JZ33   A0A151WW69   A0A158P0U0   A0A336LTC4   A0A0M8ZW79   A0A069DVL9   A0A146M150   A0A0A9XRG9   A0A1B0BWG6   A0A026WK81   A0A1B0A7W4   T1HWC2   A0A1A9V8S2   A0A2A3EUM4   A0A2R7WUS0   A0A088AF18   A0A1B6DSH2   A0A1A9WNN2   K7IVC6   I5ANC2   E2BE34   A0A067R723   A0A232EIM5   A0A2J7PYQ9   A0A0P5I2A2   A0A0P5HBI7   A0A0P5FQZ2  

Pubmed

22118469    20566863    26354079    28756777    17510324    26483478    + More
20920257    23761445    25244985    24438588    12364791    14747013    17210077    28004739    20966253    18362917    19820115    21930896    25830018    25348373    17994087    17550304    25315136    21719571    24495485    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20798317    21347285    26334808    26823975    25401762    24508170    20075255    15632085    24845553    28648823   

EMBL

AGBW02014522    OWR41526.1    ODYU01011036    SOQ56519.1    DS235806    EEB17324.1    + More
KQ459601    KPI93636.1    KZ150485    PZC70707.1    CH478177    EAT33677.1    AJWK01028036    GGFK01004502    MBW37823.1    JXUM01151241    KQ571173    KXJ68231.1    AJVK01018738    ADMH02002016    ETN59980.1    GGFJ01002690    MBW51831.1    CP012526    ALC47567.1    GGFJ01002691    MBW51832.1    AXCN02001607    AXCM01001003    GGFM01002586    MBW23337.1    KQ414940    KOC59246.1    GGFM01006053    MBW26804.1    ATLV01024911    ATLV01024912    KE525364    KFB52000.1    APCN01005395    AAAB01008898    EAA09270.5    GEZM01066229    JAV68044.1    DS232261    EDS38646.1    JN314843    KQ971372    AEM60136.1    EFA09441.1    NEVH01020342    PNF21472.1    KQ434851    KZC08593.1    GBXI01004900    JAD09392.1    GDHF01025192    GDHF01016038    GDHF01011901    JAI27122.1    JAI36276.1    JAI40413.1    GAKP01014846    JAC44106.1    CM000160    KRK03325.1    CH940650    EDW67906.1    CH933806    EDW16151.2    GL888378    EGI62019.1    GAMC01009061    GAMC01009060    GAMC01009059    JAB97495.1    KA650253    AFP64882.1    EDW96775.1    GBYB01011787    GBYB01011788    GBYB01011789    GBYB01011790    JAG81554.1    JAG81555.1    JAG81556.1    JAG81557.1    JRES01000310    KNC32422.1    CH479179    EDW23890.1    CCAG010020972    GEBQ01018689    JAT21288.1    CH480815    EDW42763.1    AE014297    AY071192    AAF54497.1    AAL48814.1    CM000364    EDX13517.1    OUUW01000013    SPP88159.1    CH954181    EDV49661.1    CH916374    EDV91552.1    CH902617    EDV42715.1    CH964232    EDW80690.2    KQ977141    KYN05386.1    KQ976738    KYM75683.1    GL440262    EFN66094.1    CVRI01000002    CRK86870.1    KQ981414    KYN41868.1    KQ982691    KYQ52078.1    ADTU01005791    UFQT01000111    SSX20191.1    KQ435821    KOX72375.1    GBGD01000741    JAC88148.1    GDHC01005088    JAQ13541.1    GBHO01022156    GBRD01008035    JAG21448.1    JAG57786.1    JXJN01021770    KK107199    EZA55509.1    ACPB03016234    KZ288185    PBC34916.1    KK855619    PTY23302.1    GEDC01008695    JAS28603.1    AAZX01001195    CM000070    EIM52457.2    GL447755    EFN86021.1    KK852660    KDR19130.1    NNAY01004201    OXU18206.1    PNF21473.1    GDIQ01242201    GDIQ01210192    JAK09524.1    GDIQ01229038    JAK22687.1    GDIP01144919    GDIP01058394    LRGB01001361    JAJ78483.1    KZS12519.1   

Proteomes

UP000007151    UP000009046    UP000053268    UP000008820    UP000092461    UP000069940    + More
UP000249989    UP000092462    UP000000673    UP000075885    UP000092553    UP000069272    UP000075886    UP000075883    UP000075920    UP000075901    UP000053825    UP000075884    UP000075880    UP000076408    UP000030765    UP000075900    UP000075881    UP000076407    UP000075840    UP000075903    UP000007062    UP000002320    UP000075882    UP000007266    UP000235965    UP000076502    UP000095300    UP000002282    UP000008792    UP000075902    UP000095301    UP000009192    UP000007755    UP000037069    UP000008744    UP000092444    UP000001292    UP000000803    UP000000304    UP000268350    UP000008711    UP000001070    UP000007801    UP000007798    UP000078542    UP000192221    UP000078540    UP000000311    UP000183832    UP000078541    UP000075809    UP000005205    UP000053105    UP000092460    UP000053097    UP000092445    UP000015103    UP000078200    UP000242457    UP000005203    UP000091820    UP000002358    UP000001819    UP000008237    UP000027135    UP000215335    UP000076858   

PRIDE

Q9VH23   

Pfam

PF10517   DM13        + More
PF03351   DOMON
PF00685   Sulfotransfer_1
PF15309   ALMS_motif

Interpro

IPR005018   DOMON_domain        + More
IPR019545   DM13_domain       
IPR016316   CD141       
IPR027417   P-loop_NTPase       
IPR000863   Sulfotransferase_dom       
IPR029299   ALMS_motif       
IPR001680   WD40_repeat       
IPR000009   PP2A_PR55       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR036322   WD40_repeat_dom_sf       
IPR018067   PP2A_PR55_CS       

SUPFAM

SSF52540   SSF52540        + More
SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A212EJ64   A0A2H1WTX1   E0VVB8   A0A194PJN3   A0A2W1BBJ5   A0A1S4G0S6   + More
Q16HF5   A0A1B0CTV7   A0A2M4AAL0   A0A182G7Z6   A0A1B0DQ19   W5JAV9   A0A182PP74   A0A2M4BFU1   A0A0M4EVW7   A0A2M4BFL6   A0A182FAN7   A0A182QZ00   A0A182MQA6   A0A2M3Z490   A0A182W3G3   A0A182SPI1   A0A0L7QL47   A0A182NGF9   A0A2M3ZE23   A0A182JDJ3   A0A182Y8S1   A0A084WP56   A0A182RE39   A0A182K2Q5   A0A182XII5   A0A182HYP4   A0A182VMM3   Q7QA02   A0A1Y1L388   B0X1J7   A0A182KZJ3   D6X2I0   A0A2J7PYU2   A0A154P9T0   A0A0A1XEJ8   A0A0K8VNI7   A0A034VLB8   A0A1I8P161   A0A0R1E237   B4LXU7   A0A182TDM7   A0A1I8N0G7   B4K5C5   F4WUV5   W8B8E7   T1PQ56   B4PKL6   A0A0C9RT20   A0A0L0CJP2   B4G6D2   A0A1B0FN49   A0A1B6LC76   B4HJ91   Q9VH23   B4QVB1   A0A3B0KNI3   B3P4K8   B4JTX3   B3LWS7   B4NA47   A0A195CXL5   A0A1W4W076   A0A195ATX6   A0A1W4VZC8   E2AKF2   A0A1J1HK80   A0A151JZ33   A0A151WW69   A0A158P0U0   A0A336LTC4   A0A0M8ZW79   A0A069DVL9   A0A146M150   A0A0A9XRG9   A0A1B0BWG6   A0A026WK81   A0A1B0A7W4   T1HWC2   A0A1A9V8S2   A0A2A3EUM4   A0A2R7WUS0   A0A088AF18   A0A1B6DSH2   A0A1A9WNN2   K7IVC6   I5ANC2   E2BE34   A0A067R723   A0A232EIM5   A0A2J7PYQ9   A0A0P5I2A2   A0A0P5HBI7   A0A0P5FQZ2  

KEGG

101743806    no KO assigned | (RefSeq) protein Skeletor, isoforms B/C

GO

GO:0016021   GO:0008146   GO:0006035   GO:0001838   GO:0008362   GO:0035158   GO:0035002   GO:0040003   GO:0035151   GO:0035152   GO:0006031   GO:0035149   GO:0007424   GO:0000159   GO:0019888  

PANTHER

PTHR24036:SF5  

SignalP

Position:   1 - 18,         Likelihood:  0.988393

 

 

Length:

683

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.02951

Exp number, first 60 AAs:

0.00064

Total prob of N-in:

0.00040

outside

1  -  654

TMhelix

655  -  677

inside

678  -  683

 

 

Pi

19.615476

Theta

23.193382

Tajima's D

-1.517079

CLR

181.864477

CSRT

0.0543972801359932

Interpretation

Uncertain