SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15465
Pre Gene Modal
BGIBMGA010776
Annotation
PREDICTED:_uncharacterized_protein_LOC106138121_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.333
 

Sequence

CDS
ATGTCGGAGTGCGTAGTGCTTGTGCGGCAGGCTCGCCCCGAAGATCAGGATGCCCGGGTCACCCTAGTTCGGCTAGGCCTTGCTGAATACAATTTTCCAGCTTTCCTCTATTTTTTTTTGCAGGAAGTGATGCTGCAATTTGTCTTGCTGTGCTGTGCGGTGCTGTTTATATTCTTCAGTACTCCATTGTGGATATGTGTGCTACCAGGTCCTGCACTTGCCATTGTGACATATATCGGCTGCACCTGTGTGCACATTGAACTTGGTCACAAACATAAGCGGAAGGTGCGCGACGAGTGGGTCGGGTTCGTGGCGGAGCTCCGCGGGCCGCTGGTGCACGAGCCGCACGGGGTCATGCCGTACGTCGTCAGCGAGCTGGACGCGGACTTCGCGCCCGTCACCCCCACGCGCATCCTCGGCACCGTGAGCCTGTCCGCGCTGTGGGGGCCGGCGGACGGGCTGTGGCTGCACGACCTCACCGTGCACCCGCAGTGGCGCGGGCGCGGGCTGGGCGGGGCGCTGCTGCAGGCCAGCTGGCAGTGGGCGCTGCGCGGCTCGGGGCTGGCGGAGGGCGCCATGGTGGAGGCGCTGGTGAGCCGGCTGCAGGGCTCGGCGGCCGCGCTGCTGCACGAGCAGGGCTGGCAGACGCGCGGCTCGTACCGGCGGCCGGCGGGCGCGGGCACGGCGCTGCCGGTGCTGCGACTGTCGCGCATCCTGGAGGCCACCTGA
Protein
MSECVVLVRQARPEDQDARVTLVRLGLAEYNFPAFLYFFLQEVMLQFVLLCCAVLFIFFSTPLWICVLPGPALAIVTYIGCTCVHIELGHKHKRKVRDEWVGFVAELRGPLVHEPHGVMPYVVSELDADFAPVTPTRILGTVSLSALWGPADGLWLHDLTVHPQWRGRGLGGALLQASWQWALRGSGLAEGAMVEALVSRLQGSAAALLHEQGWQTRGSYRRPAGAGTALPVLRLSRILEAT

Summary

EMBL
AGBW02014522    OWR41529.1    KQ459601    KPI93631.1    PYGN01000114    PSN53882.1    + More
KQ759852    OAD62537.1    GEZM01035750    JAV83103.1    KQ435794    KOX73960.1    NEVH01024418    PNF17452.1    KQ414787    KOC60796.1    KK852675    KDR18719.1    GL888186    EGI65596.1    ODYU01011036    SOQ56522.1    ADTU01001447    NNAY01000192    OXU30126.1    KQ976528    KYM81892.1    UFQT01001396    SSX30351.1    KZ288330    PBC27918.1    KQ434775    KZC04079.1    KQ982544    KYQ55338.1    KQ980989    KYN10687.1    CM000160    EDW96700.1    CH902629    EDV35287.1    CVRI01000041    CRK95303.1    CH480815    EDW42838.1    CH954181    EDV49734.1    AE014297    AY061243    BT058067    AAG22138.1    AAL28791.1    AAO41529.1    ACM78509.1    CH933806    EDW16980.1    KQ971361    KYB25863.1    JXJN01012883    APGK01003061    APGK01003062    KB735102    KB632033    ENN83450.1    ERL88190.1    CH479198    EDW28101.1    GECU01028939    GECU01012529    JAS78767.1    JAS95177.1    KQ978220    KYM96383.1    CM000070    EAL27187.2    OUUW01000013    SPP88241.1    CM000364    EDX13582.1    AAAB01008799    EAA03716.5    GBXI01011883    JAD02409.1    ATLV01021733    KE525322    KFB46844.1    CH916373    EDV94570.1    GDHF01024217    JAI28097.1    KK108171    EZA46828.1    APCN01000232    CH964232    EDW81647.1    JRES01000409    KNC31577.1    AXCN02001630    CP012526    ALC47424.1   
Pfam
PF00583   Acetyltransf_1        + More
PF13673   Acetyltransf_10
Interpro
IPR016181   Acyl_CoA_acyltransferase        + More
IPR000182   GNAT_dom       
SUPFAM
SSF55729   SSF55729       

Ontologies

Topology

Length:
242
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
45.7249900000001
Exp number, first 60 AAs:
25.01099
Total prob of N-in:
0.67146
POSSIBLE N-term signal
sequence
inside
1  -  34
TMhelix
35  -  57
outside
58  -  66
TMhelix
67  -  89
inside
90  -  242
 
 

Population Genetic Test Statistics

Pi
3.164429
Theta
3.187453
Tajima's D
0.112714
CLR
0.666427
CSRT
0.430178491075446
Interpretation
Uncertain
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