SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15463
Pre Gene Modal
BGIBMGA004759
Annotation
odorant_receptor_37_[Bombyx_mori]
Full name
Odorant receptor      
Location in the cell
PlasmaMembrane   Reliability : 4.503
 

Sequence

CDS
ATGGGATTCGAGCCGATGTTTGAATCGCCAAACTTCGAAATAGCGTCAACCCTGATGGGCGTGTCGGTGGTGTTCATCTGTTACACGGCGGGGAGCATCAGCGCCTTCCTCATCGTCATCGTAGGCTACTCCGAGGCGACCATGCTGGCGCTCAGCGACGAAATCAGCTGCGTGTGGGACGACGCGTGTGCCTCCGAATGTCAACAGCCAAACGACTTTATCAGGGCACGTCTTGGAAAGATCGTCGCGATCCACACGAAGCAAATCCGTCTCATCCGTGAGGTCGAGGTCGTGTTCCGCGGCGCGCTTGCAGGCGGCTTCGCGTGCGTCGCGTTCGGTCTCATCGCGGCGCTGCTCGGGGGGCTCGAGAACACATTCTTGCAGTTGCCTTTCTGCGTCATTCAAATATCAGTGGACTGCTTCGTTGGACAGCGACTGCGGGACGCCAACGTCGCGTTCGAGACGGCCGTGTACAACTGCAAATGGGAATACTTCGACAAATCTAATATGAAGACGGTGCTGCTGATTCTGCAGAACTCCCAGAAGACGATGGGCTTGACGGCGGGAGGGGTGGCCGCGCTCGACTTCACCTCGCTCATGACCATATTCAAGTCTGTGTATTCGGCGTACACCACTCTCAGACCGATGATTAACAAACGCAATTAA
Protein
MGFEPMFESPNFEIASTLMGVSVVFICYTAGSISAFLIVIVGYSEATMLALSDEISCVWDDACASECQQPNDFIRARLGKIVAIHTKQIRLIREVEVVFRGALAGGFACVAFGLIAALLGGLENTFLQLPFCVIQISVDCFVGQRLRDANVAFETAVYNCKWEYFDKSNMKTVLLILQNSQKTMGLTAGGVAALDFTSLMTIFKSVYSAYTTLRPMINKRN

Summary

Similarity
Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.
EMBL
DQ991156    ABK27850.1    BK005943    DAA05993.1    AB472116    BAH66334.1    + More
BABH01028070    BABH01028071    BABH01028072    BABH01028073    JQ794808    AFL70813.1    AB472117    BAH66335.1    AB186510    AB472114    BAG12809.1    BAH66332.1    BK005944    DAA05994.1    ODYU01007660    SOQ50634.1    BK005941    DAA05991.1    BABH01027593    LC002710    BAR43458.1    KY707208    AVF19650.1    GENK01000057    JAV45856.1    AB186516    AB472118    BAG12815.1    BAH66336.1    LC002703    BAR43451.1    NWSH01003458    PCG66259.1    KT588132    AOE48042.1    KZ150062    PZC74191.1    KF768704    AIG51898.1    KR935736    ALM26228.1    JTDY01012011    KOB52347.1    JTDY01001167    KOB74670.1    SOQ50636.1    GDKB01000050    JAP38446.1    MG816599    AXF48784.1    KX084505    ARO76460.1    NWSH01002174    PCG68968.1    KF487680    AII01078.1    KX585338    ARO70231.1    KJ542684    AJD81568.1    BABH01027717    BABH01027718    BABH01027719    BABH01027720    BABH01027721    PCG66260.1    MH193989    AZB49435.1    KY399282    AQQ73513.1    KF487666    AII01064.1    PZC74192.1    KF487708    AII01106.1    JN836705    AFC91745.2    PZC74198.1    KM678313    AJE25886.1    MH193983    AZB49429.1    PCG68967.1    GEDO01000057    JAP88569.1    KM892387    AJF23802.1    KX084467    ARO76422.1    KY399283    AQQ73514.1    KF487678    AII01076.1    PZC74193.1    KT588137    AOE48047.1    GCVX01000195    JAI18035.1    JQ794807    AFL70812.1    SOQ50635.1    RSAL01000110    RVE47145.1    GEDO01000034    JAP88592.1    KX655993    AOG12942.1    KY225496    ARO70508.1    KM655551    AIT72001.1    KM892388    AJF23803.1    KM678314    AJE25887.1    KY707234    AVF19676.1    KM597214    AIT69891.1    GENK01000073    JAV45840.1    PCG68969.1    KY707207    AVF19649.1    GEDO01000058    JAP88568.1    KX084500    ARO76455.1    KM597213    AIT69890.1    KU598896    ANZ03142.1    KM655550    AIT72000.1    GCVX01000196    JAI18034.1    SOQ50633.1    KY707206    AVF19648.1    KY399285    AQQ73516.1    MG816609    AXF48794.1    AGBW02012963    OWR44153.1    LC002711    BAR43459.1    AGBW02009241    OWR51272.1    KR935735    ALM26227.1    KY283662    AST36321.1    KY399281    AQQ73512.1    KY283620    AST36279.1    KY399284    AQQ73515.1    KY283740    AST36399.1    OWR51276.1    MG816598    AXF48783.1    KY283663    AST36322.1    MG816612    AXF48797.1    JN836706    AFC91746.1    AGBW02008001    OWR54326.1    KY283610    AST36269.1    OWR51275.1    KP975144    ALT31663.1    MG546606    AYD42229.1    KX585345    ARO70238.1    GENK01000065    JAV45848.1   
Pfam
PF02949   7tm_6
Interpro
IPR004117   7tm6_olfct_rcpt       

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
221
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
66.88044
Exp number, first 60 AAs:
23.17218
Total prob of N-in:
0.00377
POSSIBLE N-term signal
sequence
outside
1  -  19
TMhelix
20  -  42
inside
43  -  96
TMhelix
97  -  119
outside
120  -  184
TMhelix
185  -  207
inside
208  -  221
 
 

Population Genetic Test Statistics

Pi
227.945214
Theta
172.705134
Tajima's D
1.006161
CLR
64.109605
CSRT
0.661816909154542
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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