SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15461
Pre Gene Modal
BGIBMGA004758
Annotation
PREDICTED:_mitochondrial_intermembrane_space_import_and_assembly_protein_40-B_[Plutella_xylostella]
Location in the cell
Extracellular   Reliability : 1.379 Nuclear   Reliability : 1.12
 

Sequence

CDS
ATGTCGTCTCCATCAATTCTACCTGCTGGGTCAGGCAACAAAGATATAGTGATTGTAGCATCACGCGAAGAGTTGTCTACACCAAGTAGAGTATCACTCCCGGACCCTGAACCGACACCTGGCCTCATTCTGGCAGATGGTTCCATCAATTGGGGATGTCCATGTCTTGGGGGTATGGCCACTGGTCCTTGTGGGATACAGTTCCGTGAGGCATTTTCCTGCTTTCATTACAGTGAGGCGGACCCAAAGGGTAGCGATTGTTACGAGAAGTTCAGCGTGATGCAACAGTGTATGGCGGAGTACCCCGACCTGTACGGTCGCGACGACGACGACGAACTCGCAGAGGCGCTCGCCGGCTCCGATACTGCCACCGCCCCTGCCACTGCCACTGCCCCTGCCCCTGCCACTACTACTGACAACAACGCCACTGAGGAACCTCACTGA
Protein
MSSPSILPAGSGNKDIVIVASREELSTPSRVSLPDPEPTPGLILADGSINWGCPCLGGMATGPCGIQFREAFSCFHYSEADPKGSDCYEKFSVMQQCMAEYPDLYGRDDDDELAEALAGSDTATAPATATAPAPATTTDNNATEEPH

Summary

Pfam
PF06747   CHCH        + More
PF01900   RNase_P_Rpp14
Interpro
IPR039289   CHCHD4        + More
IPR010625   CHCH       
IPR038085   Rnp2-like_sf       
IPR002759   RNase_P/MRP_subunit       
SUPFAM
SSF160350   SSF160350       
Gene 3D
PDB
2K3J     E-value=1.29669e-24,     Score=274

Ontologies

Topology

Length:
147
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01564
Exp number, first 60 AAs:
0.01224
Total prob of N-in:
0.02054
outside
1  -  147
 
 

Population Genetic Test Statistics

Pi
139.486613
Theta
156.726339
Tajima's D
-0.381638
CLR
23.441078
CSRT
0.268236588170591
Interpretation
Uncertain
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