Gene

KWMTBOMO15451

Pre Gene Modal

BGIBMGA004767

Annotation

PREDICTED:_nephrin-like_[Bombyx_mori]

Location

Bomo_Chr25(-):14019898-14044150      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.791

CDS

ATGGACGCCAAGACCAGAAGCCACACTCGACTACTAGAGCCCTACAACGAGGGAGATACCCTGGAACTTATTTGCGAAACATATGGTGGTGATCCAAGGCCCAGTGTGACTTGGTACTTGGAGAACACCGTCATCGACGACTCATTTGAGCAGCGCCCTGACGGAGTGACTGTCAACACCCTGACCTTCCCCAGTGTTGGTCGTCAGCATCTCAACGCAAGGCTCGTCTGTCAAGCTTCGAACACAAATCTAGCGCCACCGGAAACTAAGCTTTTAATACTTGATATAAACTTAAGGCCACTCAGCGTGCAGATCTTGAATAAGAGGCCGGAGCTTTCCGCAGACAGGACTTATGAACTTGAGTGCAAGACTACTGGATCCCGGCCCGAAGCTCAAGTTACGTGGTGGAAAGGTGGAAGACAATACAAAAGGAGTGCAGCCAAAAATTTCTCCGAGAGCAACGCAACGACCAGCGTCCTAACGTTTGTGCCTGTCGCCGAGGACCACGAGAAGACCCTGGTCTGTCGCGCCGAGAACCCCAGCGTGGTGGAATCATCGATAGAAGACAAATGGAAAATGAACGTGCATTATAACCCATCAAGATTAAACTTAGAAAAAAACTACTGA

Protein

MDAKTRSHTRLLEPYNEGDTLELICETYGGDPRPSVTWYLENTVIDDSFEQRPDGVTVNTLTFPSVGRQHLNARLVCQASNTNLAPPETKLLILDINLRPLSVQILNKRPELSADRTYELECKTTGSRPEAQVTWWKGGRQYKRSAAKNFSESNATTSVLTFVPVAEDHEKTLVCRAENPSVVESSIEDKWKMNVHYNPSRLNLEKNY

Uniprot

A0A194PPP2   A0A212EM07   H9J5G2   H9J5H7   A0A2A4JDY9   A0A212FI98   + More
A0A194RK28   A0A194PPB3   A0A2H1WJ89   A0A2A4JRL1   A0A3S2MB94   A0A1B0CF37   A0A0A9ZBH5   A0A0K8T359   A0A1Y1NKS5   D6WPK9   A0A182UG36   A0A1W4WQT7   A0A1W4WRT9   A0A1W4WFY8   A0A1J1HQ06   A0A182LRH8   A0A182KC68   A0A182R5H8   A0A182N5E5   A0A2J7PYK2   A0A194RJS5   A0A067RCL4   A0A1B0BUJ4   N6U7Y1   A0A182X9U7   A0A154P4D6   A0A182L937   A0A182Y570   A0A1Y9IRW5   W5JRL3   A0A182HKS9   A0A182VRA0   A0A182P2F8   A0A182QRL9   A0A182IS29   A0A336MBR2   U4TXN3   A0A2J7PYN3   B0WA44   A0A1B0GLI9   A0A336M9R3   A0A1B6C6V9   A0A0P9ANK1   B4NKE4   A0A1I8PBW5   Q16ZD1   A0A1I8NIL5   A0A0L0BY62   Q7PXI0   A0A0Q9W1D8   A0A1S4GCH1   B4M6A4   A0A0M5JCQ5   A0A1A9UZ31   A0A1W7R8R5   B3LX91   A0A0R3NN42   A0A0A1WVT0   A0A034W9N8   A0A0K8U830   A0A1W4UR97   A0A0K8WMB4   B4G2W0   C0PTV4   W8B9C8   Q297Q6   B4KAA3   A0A1W4V371   A0A3B0KV58   A0A1W4V3H8   A0A1A9Z0I0   B4JI81   E2A238   E0VML7   B3P448   B4R186   Q9VFU7   B4HFS3   B4PQF3   A0A0N0U2L6   A0A1B6LB71   A0A3L8E1Y0   A0A0L7LS03   A0A195CH45   A0A1B6G259   A0A195AY80   A0A158NPB4   A0A182FA48   A0A232FK68   A0A0L7QTN9   A0A336MDA0   F4WF94   A0A336M8W5  

Pubmed

26354079    22118469    19121390    25401762    26823975    28004739    + More
18362917    19820115    24845553    23537049    20966253    25244985    20920257    23761445    17994087    17510324    25315136    26108605    12364791    18057021    15632085    25830018    25348373    24495485    23185243    20798317    20566863    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    30249741    26227816    21347285    28648823    21719571   

EMBL

KQ459596    KPI95282.1    AGBW02013965    OWR42507.1    BABH01028139    BABH01028110    + More
BABH01028111    NWSH01001734    PCG70297.1    AGBW02008416    OWR53449.1    KQ460118    KPJ17690.1    KPI95281.1    ODYU01008707    SOQ52514.1    NWSH01000804    PCG74103.1    RSAL01000001    RVE55293.1    AJWK01009649    AJWK01009650    AJWK01009651    GBHO01002348    GDHC01008300    JAG41256.1    JAQ10329.1    GBRD01006221    JAG59600.1    GEZM01002471    JAV97235.1    KQ971354    EFA06826.2    CVRI01000006    CRK88297.1    AXCM01006148    NEVH01020344    PNF21423.1    KPJ17689.1    KK852551    KDR21492.1    JXJN01020724    JXJN01020725    JXJN01020726    APGK01045656    APGK01045657    APGK01045658    APGK01045659    KB741037    ENN74692.1    KQ434809    KZC06717.1    ADMH02000629    ETN65555.1    APCN01000864    AXCN02001176    UFQT01000721    SSX26761.1    KB631716    ERL85567.1    PNF21422.1    DS231868    EDS40777.1    AJWK01035068    AJWK01035069    AJWK01035070    SSX26760.1    GEDC01028050    JAS09248.1    CH902617    KPU79298.1    CH964272    EDW84074.1    CH477492    EAT40016.1    JRES01001160    KNC24967.1    AAAB01008987    EAA01081.5    CH940652    KRF78738.1    EDW59180.1    KRF78739.1    KRF78740.1    CP012526    ALC47181.1    GEHC01000109    JAV47536.1    EDV41691.1    KPU79296.1    KPU79297.1    KPU79299.1    CM000070    KRT00496.1    GBXI01011571    JAD02721.1    GAKP01006691    JAC52261.1    GDHF01029500    JAI22814.1    GDHF01028633    GDHF01000289    JAI23681.1    JAI52025.1    CH479179    EDW24155.1    BT071799    ACN43735.2    GAMC01011313    JAB95242.1    EAL28149.2    KRT00494.1    KRT00495.1    KRT00497.1    CH933806    EDW14590.1    KRG01093.1    KRG01094.1    OUUW01000013    SPP87858.1    CH916369    EDV92962.1    GL435917    EFN72486.1    DS235315    EEB14623.1    CH954181    EDV49222.1    CM000364    EDX13063.1    AE014297    AAF54952.3    AFH06404.1    CH480815    EDW42308.1    CM000160    EDW97249.1    KRK03606.1    KQ436043    KOX67494.1    GEBQ01019020    JAT20957.1    QOIP01000001    RLU26636.1    JTDY01000215    KOB78250.1    KQ977791    KYM99751.1    GECZ01013250    JAS56519.1    KQ976703    KYM77198.1    ADTU01022145    ADTU01022146    ADTU01022147    ADTU01022148    ADTU01022149    ADTU01022150    ADTU01022151    ADTU01022152    NNAY01000092    OXU31062.1    KQ414740    KOC62013.1    SSX26763.1    GL888115    EGI67145.1    SSX26762.1   

Proteomes

UP000053268    UP000007151    UP000005204    UP000218220    UP000053240    UP000283053    + More
UP000092461    UP000007266    UP000075902    UP000192223    UP000183832    UP000075883    UP000075881    UP000075900    UP000075884    UP000235965    UP000027135    UP000092460    UP000019118    UP000076407    UP000076502    UP000075882    UP000076408    UP000075903    UP000000673    UP000075840    UP000075920    UP000075885    UP000075886    UP000075880    UP000030742    UP000002320    UP000007801    UP000007798    UP000095300    UP000008820    UP000095301    UP000037069    UP000007062    UP000008792    UP000092553    UP000078200    UP000001819    UP000192221    UP000008744    UP000009192    UP000268350    UP000092445    UP000001070    UP000000311    UP000009046    UP000008711    UP000000304    UP000000803    UP000001292    UP000002282    UP000053105    UP000279307    UP000037510    UP000078542    UP000078540    UP000005205    UP000069272    UP000215335    UP000053825    UP000007755   

PRIDE

H9J5G2    H9J5H7    C0PTV4    Q9VFU7   

Pfam

PF08205   C2-set_2        + More
PF07686   V-set
PF07679   I-set
PF00047   ig
PF00041   fn3

Interpro

IPR013162   CD80_C2-set        + More
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR036116   FN3_sf       
IPR003961   FN3_dom       
IPR013106   Ig_V-set       
IPR013098   Ig_I-set       
IPR013151   Immunoglobulin       

SUPFAM

SSF48726   SSF48726        + More
SSF49265   SSF49265       

Gene 3D

2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

A0A194PPP2   A0A212EM07   H9J5G2   H9J5H7   A0A2A4JDY9   A0A212FI98   + More
A0A194RK28   A0A194PPB3   A0A2H1WJ89   A0A2A4JRL1   A0A3S2MB94   A0A1B0CF37   A0A0A9ZBH5   A0A0K8T359   A0A1Y1NKS5   D6WPK9   A0A182UG36   A0A1W4WQT7   A0A1W4WRT9   A0A1W4WFY8   A0A1J1HQ06   A0A182LRH8   A0A182KC68   A0A182R5H8   A0A182N5E5   A0A2J7PYK2   A0A194RJS5   A0A067RCL4   A0A1B0BUJ4   N6U7Y1   A0A182X9U7   A0A154P4D6   A0A182L937   A0A182Y570   A0A1Y9IRW5   W5JRL3   A0A182HKS9   A0A182VRA0   A0A182P2F8   A0A182QRL9   A0A182IS29   A0A336MBR2   U4TXN3   A0A2J7PYN3   B0WA44   A0A1B0GLI9   A0A336M9R3   A0A1B6C6V9   A0A0P9ANK1   B4NKE4   A0A1I8PBW5   Q16ZD1   A0A1I8NIL5   A0A0L0BY62   Q7PXI0   A0A0Q9W1D8   A0A1S4GCH1   B4M6A4   A0A0M5JCQ5   A0A1A9UZ31   A0A1W7R8R5   B3LX91   A0A0R3NN42   A0A0A1WVT0   A0A034W9N8   A0A0K8U830   A0A1W4UR97   A0A0K8WMB4   B4G2W0   C0PTV4   W8B9C8   Q297Q6   B4KAA3   A0A1W4V371   A0A3B0KV58   A0A1W4V3H8   A0A1A9Z0I0   B4JI81   E2A238   E0VML7   B3P448   B4R186   Q9VFU7   B4HFS3   B4PQF3   A0A0N0U2L6   A0A1B6LB71   A0A3L8E1Y0   A0A0L7LS03   A0A195CH45   A0A1B6G259   A0A195AY80   A0A158NPB4   A0A182FA48   A0A232FK68   A0A0L7QTN9   A0A336MDA0   F4WF94   A0A336M8W5  

PDB

4OFY     E-value=1.06074e-09,     Score=148

KEGG

101743213    no KO assigned | (RefSeq) nephrin-like

GO

GO:0016021   GO:0005515   GO:0003676   GO:0004721   GO:0030145   GO:0043565   GO:0003677   GO:0003707   GO:0006281   GO:0006259  

Length:

208

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00566

Exp number, first 60 AAs:

0

Total prob of N-in:

0.49627

outside

1  -  208

 

 

Pi

225.042735

Theta

159.815033

Tajima's D

1.13928

CLR

0.715831

CSRT

0.699715014249288

Interpretation

Uncertain