Gene

KWMTBOMO15449

Pre Gene Modal

BGIBMGA004768

Annotation

PREDICTED:_nephrin-like_[Bombyx_mori]

Location

Bomo_Chr25(-):13995083-14002660      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.498

CDS

ATGAGCCAAGCTTCCAGGTGTAGATTGCTGACATGGGCTGGCGGTAACATTGTCATTGTGTCCACCAGACTGGTGCTCAGATCTCTGAGTTTTACGGGTCGTCTGAGGGCACGTGTTTTCAGGTCTGGCCTCCAAAAGGGCTTCTTCCACTTGGGTGCCACTAATGTCCCTATAGTGACTTTGAAACTCGGATCTACCCTTAATCCTTCCCATATCAAGGAAGGTGACGACGTCTACTTCGAGTGCATTGTAAAAGCAAACCCGAAGACGCATAAGCTCACTTGGTATAAAGGAACTAAAGAAATTCAACATAACGCGAGTTCTGGAATCATTCTCAGCGACCAAAGCCTGGTGCTGCAAAGCGTCAGCCGATCAACCGCCGGGGACTATAGCTGTTTAGCATATAACAGCGAAGGAAGTGCCACTAGCAACCCTGTGTCTTTATTGATAAGGTATGCTCCAGTGTGCAAAACAATAAACGAAGGAGAAGTGTACGGCGCTTTGAAACAAGAGACGGTGACCTTGAATTGTGCTGTTGACTCCAGCCCAGCTCCCACCAGCTTCAGCTGGATCTTCAATAGCTCTGGCGACCAAACGGAGCTGGCTGCGAACACGTACACATCAGCTGGCTTCACTTCGAATCTTCGTTACACTCCGATTTCTGAAATGGATTTTGGCACGATACTCTGCATGGCAACTAACACAGTGGGAAGGCAGAAGATCCCATGCCTCTACAAGCTGATTGCGGCAGGACAGCCGACGGCACTCCACAACTGTTCAGTGGCGAACCAGAGCTCGGCCAGTTTACAAGTGGAATGCGCGGAAGGCTTCGACGGAGGGCTCCCGCAGGTTTTCTTCATGGAGGTCTTGGAACTCCCGGCTATGACCGTAATATTTGAATTTTATTATTTTTCAAATCATATCCTATGTCTTTTATAA

Protein

MSQASRCRLLTWAGGNIVIVSTRLVLRSLSFTGRLRARVFRSGLQKGFFHLGATNVPIVTLKLGSTLNPSHIKEGDDVYFECIVKANPKTHKLTWYKGTKEIQHNASSGIILSDQSLVLQSVSRSTAGDYSCLAYNSEGSATSNPVSLLIRYAPVCKTINEGEVYGALKQETVTLNCAVDSSPAPTSFSWIFNSSGDQTELAANTYTSAGFTSNLRYTPISEMDFGTILCMATNTVGRQKIPCLYKLIAAGQPTALHNCSVANQSSASLQVECAEGFDGGLPQVFFMEVLELPAMTVIFEFYYFSNHILCLL

Uniprot

A0A2A4JRL1   A0A2A4JDY9   H9J5G2   A0A2H1WJ89   A0A194PPP2   A0A212FI98   + More
A0A194RJS5   A0A212EM07   D6WPK9   A0A084VK18   A0A194RK28   A0A194PPB3   A0A0T6BBD7   C0PTV4   A0A1B6HNZ8   A0A1W4WRT9   A0A1W4WFY8   A0A1W4WQT7   A0A1B6G259   Q16ZD1   A0A1Y1NKS5   A0A1W4UR97   A0A1W4V371   Q9VFU7   A0A1W4V3H8   B3P448   B4PQF3   A0A182FA48   B4R186   A0A1W7R8R5   A0A182IS29   A0A182X9U7   B4HFS3   A0A0L0BY62   A0A182Y570   A0A1B6LB71   A0A182L937   A0A1I8PBW5   A0A182P2F8   A0A2J7PYL9   B3LX91   A0A0R3NN42   B4NKE4   A0A182QRL9   A0A0Q9W1D8   A0A1Y9IRW5   B4G2W0   Q297Q6   A0A3B0KV58   A0A1I8NIL5   W5JRL3   B4M6A4   A0A034W9N8   A0A2J7PYN3   A0A0M5JCQ5   A0A182HKS9   A0A0K8T359   A0A0A9ZBH5   B0WA44   W8B9C8   B4KAA3   A0A0A1WVT0   B4JI81   A0A1J1HJU9   A0A0K8WMB4   A0A0K8U830   A0A1B6C6V9   A0A067RCL4   E0VML7   A0A1S4GCH1   Q7PXI0   A0A3Q0IU89   A0A336MBR2   A0A336M9R3   A0A310SHP9   A0A0L7QTN9   A0A158NPB4   A0A310SR31   A0A154P3M9   A0A026WSM2   A0A3L8D7Y1   A0A0N0U2L6   A0A3L8E1Y0   A0A151IA00   A0A0L7LS03   U4TXM8   A0A088AIP3   N6TZI3   A0A195EGJ5   A0A1Y1NJZ5   A0A084VRP7   E2A1U1   F4WF89   A0A1A9Z0I0   A0A1B6D0Y2   A0A1D2NBV5   A0A194PP96   A0A154P4D6   A0A182II24   E2B8S6  

Pubmed

19121390    26354079    22118469    18362917    19820115    24438588    + More
17510324    28004739    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    17550304    26108605    25244985    20966253    18057021    15632085    23185243    25315136    20920257    23761445    25348373    25401762    26823975    24495485    25830018    24845553    20566863    12364791    21347285    24508170    30249741    26227816    23537049    20798317    21719571    27289101   

EMBL

NWSH01000804    PCG74103.1    NWSH01001734    PCG70297.1    BABH01028139    ODYU01008707    + More
SOQ52514.1    KQ459596    KPI95282.1    AGBW02008416    OWR53449.1    KQ460118    KPJ17689.1    AGBW02013965    OWR42507.1    KQ971354    EFA06826.2    ATLV01014043    ATLV01014044    KE524931    KFB38312.1    KPJ17690.1    KPI95281.1    LJIG01002527    KRT84413.1    BT071799    ACN43735.2    GECU01031289    JAS76417.1    GECZ01013250    JAS56519.1    CH477492    EAT40016.1    GEZM01002471    JAV97235.1    AE014297    AAF54952.3    AFH06404.1    CH954181    EDV49222.1    CM000160    EDW97249.1    KRK03606.1    CM000364    EDX13063.1    GEHC01000109    JAV47536.1    CH480815    EDW42308.1    JRES01001160    KNC24967.1    GEBQ01019020    JAT20957.1    NEVH01020344    PNF21424.1    CH902617    EDV41691.1    KPU79296.1    KPU79297.1    KPU79299.1    CM000070    KRT00496.1    CH964272    EDW84074.1    AXCN02001176    CH940652    KRF78738.1    CH479179    EDW24155.1    EAL28149.2    KRT00494.1    KRT00495.1    KRT00497.1    OUUW01000013    SPP87858.1    ADMH02000629    ETN65555.1    EDW59180.1    KRF78739.1    KRF78740.1    GAKP01006691    JAC52261.1    PNF21422.1    CP012526    ALC47181.1    APCN01000864    GBRD01006221    JAG59600.1    GBHO01002348    GDHC01008300    JAG41256.1    JAQ10329.1    DS231868    EDS40777.1    GAMC01011313    JAB95242.1    CH933806    EDW14590.1    KRG01093.1    KRG01094.1    GBXI01011571    JAD02721.1    CH916369    EDV92962.1    CVRI01000006    CRK88301.1    GDHF01028633    GDHF01000289    JAI23681.1    JAI52025.1    GDHF01029500    JAI22814.1    GEDC01028050    JAS09248.1    KK852551    KDR21492.1    DS235315    EEB14623.1    AAAB01008987    EAA01081.5    UFQT01000721    SSX26761.1    SSX26760.1    KQ768496    OAD53110.1    KQ414740    KOC62013.1    ADTU01022145    ADTU01022146    ADTU01022147    ADTU01022148    ADTU01022149    ADTU01022150    ADTU01022151    ADTU01022152    KQ761039    OAD58331.1    KQ434809    KZC06457.1    KK107111    EZA59032.1    QOIP01000011    RLU16384.1    KQ436043    KOX67494.1    QOIP01000001    RLU26636.1    KQ978252    KYM95902.1    JTDY01000215    KOB78250.1    KB631716    ERL85562.1    APGK01045684    APGK01045685    APGK01045686    APGK01045687    APGK01045688    KB741037    ENN74695.1    KQ978957    KYN27022.1    GEZM01002480    JAV97230.1    ATLV01015761    ATLV01015762    KE525036    KFB40641.1    GL435806    EFN72580.1    GL888115    EGI67140.1    GEDC01017936    JAS19362.1    LJIJ01000097    ODN02743.1    KPI95261.1    KZC06717.1    APCN01002092    APCN01002093    GL446373    EFN87898.1   

Proteomes

UP000218220    UP000005204    UP000053268    UP000007151    UP000053240    UP000007266    + More
UP000030765    UP000192223    UP000008820    UP000192221    UP000000803    UP000008711    UP000002282    UP000069272    UP000000304    UP000075880    UP000076407    UP000001292    UP000037069    UP000076408    UP000075882    UP000095300    UP000075885    UP000235965    UP000007801    UP000001819    UP000007798    UP000075886    UP000008792    UP000075903    UP000008744    UP000268350    UP000095301    UP000000673    UP000092553    UP000075840    UP000002320    UP000009192    UP000001070    UP000183832    UP000027135    UP000009046    UP000007062    UP000079169    UP000053825    UP000005205    UP000076502    UP000053097    UP000279307    UP000053105    UP000078542    UP000037510    UP000030742    UP000005203    UP000019118    UP000078492    UP000000311    UP000007755    UP000092445    UP000094527    UP000008237   

PRIDE

H9J5G2    C0PTV4    Q9VFU7   

Pfam

PF08205   C2-set_2        + More
PF07686   V-set
PF07679   I-set
PF00047   ig

Interpro

IPR013783   Ig-like_fold        + More
IPR013162   CD80_C2-set       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR003961   FN3_dom       
IPR036116   FN3_sf       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013106   Ig_V-set       
IPR013098   Ig_I-set       
IPR013151   Immunoglobulin       

SUPFAM

SSF49265   SSF49265        + More
SSF48726   SSF48726       

Gene 3D

2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

A0A2A4JRL1   A0A2A4JDY9   H9J5G2   A0A2H1WJ89   A0A194PPP2   A0A212FI98   + More
A0A194RJS5   A0A212EM07   D6WPK9   A0A084VK18   A0A194RK28   A0A194PPB3   A0A0T6BBD7   C0PTV4   A0A1B6HNZ8   A0A1W4WRT9   A0A1W4WFY8   A0A1W4WQT7   A0A1B6G259   Q16ZD1   A0A1Y1NKS5   A0A1W4UR97   A0A1W4V371   Q9VFU7   A0A1W4V3H8   B3P448   B4PQF3   A0A182FA48   B4R186   A0A1W7R8R5   A0A182IS29   A0A182X9U7   B4HFS3   A0A0L0BY62   A0A182Y570   A0A1B6LB71   A0A182L937   A0A1I8PBW5   A0A182P2F8   A0A2J7PYL9   B3LX91   A0A0R3NN42   B4NKE4   A0A182QRL9   A0A0Q9W1D8   A0A1Y9IRW5   B4G2W0   Q297Q6   A0A3B0KV58   A0A1I8NIL5   W5JRL3   B4M6A4   A0A034W9N8   A0A2J7PYN3   A0A0M5JCQ5   A0A182HKS9   A0A0K8T359   A0A0A9ZBH5   B0WA44   W8B9C8   B4KAA3   A0A0A1WVT0   B4JI81   A0A1J1HJU9   A0A0K8WMB4   A0A0K8U830   A0A1B6C6V9   A0A067RCL4   E0VML7   A0A1S4GCH1   Q7PXI0   A0A3Q0IU89   A0A336MBR2   A0A336M9R3   A0A310SHP9   A0A0L7QTN9   A0A158NPB4   A0A310SR31   A0A154P3M9   A0A026WSM2   A0A3L8D7Y1   A0A0N0U2L6   A0A3L8E1Y0   A0A151IA00   A0A0L7LS03   U4TXM8   A0A088AIP3   N6TZI3   A0A195EGJ5   A0A1Y1NJZ5   A0A084VRP7   E2A1U1   F4WF89   A0A1A9Z0I0   A0A1B6D0Y2   A0A1D2NBV5   A0A194PP96   A0A154P4D6   A0A182II24   E2B8S6  

PDB

3KLD     E-value=3.17813e-07,     Score=129

KEGG

101743213    no KO assigned | (RefSeq) nephrin-like

GO

GO:0016021   GO:0005515   GO:0006813   GO:0004721   GO:0030145   GO:0043565   GO:0003677   GO:0003707   GO:0006281   GO:0006259  

Length:

312

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

10.89453

Exp number, first 60 AAs:

8.7378

Total prob of N-in:

0.43455

outside

1  -  312

 

 

Pi

42.339934

Theta

183.931552

Tajima's D

-2.567689

CLR

1290.809466

CSRT

0.000149992500374981

Interpretation

Uncertain