SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15448
Pre Gene Modal
BGIBMGA004769
Annotation
PREDICTED:_nephrin-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.967
 

Sequence

CDS
ATGACGGAGGGTATGTACAATATGAGCGATTTTATCAGGAGCGGTCTCTACATGGAGCACAGCGTTGAATCATTATCGAAACAGGATAATTTGAACACGTACTGTGCGTCTCCGAAGCTGGAGTACTGCAGCCAGTATGAGTTGAAAGCCGACACGGGGGAAGAAACGGACCCCGACATCATACCCTGTCATCACGATAAGAGATCAATAAATGATTACACCAAATTAGGGATTGGTGTAGACTGTGATGCTCTCAGCATGTACAGTGAAAAAACTAGCATACCTGCCAGTGCCTCAGCGGTAAGTATTAGAGTGAACCGTGGAGTAACAGCGCGGAGTTCAGATATATCGTCGAGCGTCTGTAATGCGACGGTCGCACATTTGCGCCGCGACAACCTCGCCACAGTCGGGAAAGTACGGGAGAGCTGCATTTAA
Protein
MTEGMYNMSDFIRSGLYMEHSVESLSKQDNLNTYCASPKLEYCSQYELKADTGEETDPDIIPCHHDKRSINDYTKLGIGVDCDALSMYSEKTSIPASASAVSIRVNRGVTARSSDISSSVCNATVAHLRRDNLATVGKVRESCI

Summary

Pfam
PF08205   C2-set_2        + More
PF07679   I-set
Interpro
IPR013783   Ig-like_fold        + More
IPR013162   CD80_C2-set       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR003961   FN3_dom       
IPR036116   FN3_sf       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013098   Ig_I-set       
SUPFAM
SSF49265   SSF49265        + More
SSF48726   SSF48726       
Gene 3D

Ontologies

Topology

Length:
144
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00043
Exp number, first 60 AAs:
0
Total prob of N-in:
0.22938
outside
1  -  144
 
 

Population Genetic Test Statistics

Pi
227.640566
Theta
141.559586
Tajima's D
-1.535365
CLR
0.005954
CSRT
0.0586970651467427
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号