Gene

KWMTBOMO15444

Pre Gene Modal

BGIBMGA004770

Annotation

Inwardly_rectifying_k+_channel_[Operophtera_brumata]

Location

Bomo_Chr25(-):13383754-13385840      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.711

CDS

ATGTCAGATTACAACGAAAAATCTGATGAATGGGAAGACGGAAAATTTGTTTTCCAATTCGTTCAAAATTTGGCACCGGGTACATACGTACCTCGTAACAAATTCTATCATCAGATTCCAGTGACAGCAAGAAACAGAAGAGTTTTGTCTAAGGATGGGGAATCTAATTTCTCAAAGCCATTGTTACATTGCCGGAAGGGATTTTCCTACTCTTTCATGACTATAGTCGAAGCCAAATGGAGATGGACCTTATTCTACTTATTTCTGGCCTTCTGCGCAGATTGGTTATTTTTTGGTATAATTTACTGGTTCATCGCACTTGTCCATGGAGACTTATCTGAGGATCATCTGCCTCAATACCAAAACGCAACCGGTTGGGTGCCTTGTATCAAAAATGTCTACGGGTTTACGTCTACATTTCTCTTTAGTATTGAGGTTCACACAACCGTTGCGTACAGTCAAAGGGCGATTACCCCCAACTGCCCAGTAACCATACTAGCTATGTGTCTTCAATGTATAGTCAGTTCTATCTTTCAAGCTTTCATGATCGGGATATTGTTTGCAAAAATAACACGACCCAACGCTAGGGTTGATACTATATTATTCAGCAAACGGGCCGTTATTTCTCTTAGAGACGAGAAATTGTGTTTAATTTTAAGGGTTGGCAATGTGCGGAAATTTAAGATACAAAATGTTAAAGCTACAGTTATTCTATTGAAGTTTATTAATAAGAACAATAACATGTATTTTGTAGAGCAAAAGGAATTAGGTGTTACAATGGATGGATATGAATCGACATTTTCTTTGTGGCCAATATCTGTTGTTCATATTATCGATGAAAAAAGTCCACTTTACGACATATCAGCTGCGGATTTACTATGTGGACATTTCGAAATTTTGGCTATATTCGAAGGTATTAATGGAATCACCGGTCAAGCAGTCCAAGCAAGAACTAGCTACACAGAAAACGATTTGCTTTGGGGTCATCGTTTCGTTCCCATGATAAACGATATAAACAAGATAGCATATGATTTATCTAAACTCAGCGCAACGCATGAAGTAGATACCCCACTGTGCTCGGCTAATGAATATGATGTTTTAATGACGTTAGTTGACTTTGAAGACAAAATATCTGATAAGAAATAG

Protein

MSDYNEKSDEWEDGKFVFQFVQNLAPGTYVPRNKFYHQIPVTARNRRVLSKDGESNFSKPLLHCRKGFSYSFMTIVEAKWRWTLFYLFLAFCADWLFFGIIYWFIALVHGDLSEDHLPQYQNATGWVPCIKNVYGFTSTFLFSIEVHTTVAYSQRAITPNCPVTILAMCLQCIVSSIFQAFMIGILFAKITRPNARVDTILFSKRAVISLRDEKLCLILRVGNVRKFKIQNVKATVILLKFINKNNNMYFVEQKELGVTMDGYESTFSLWPISVVHIIDEKSPLYDISAADLLCGHFEILAIFEGINGITGQAVQARTSYTENDLLWGHRFVPMINDINKIAYDLSKLSATHEVDTPLCSANEYDVLMTLVDFEDKISDKK

Similarity

Belongs to the inward rectifier-type potassium channel (TC 1.A.2.1) family.

Uniprot

A0A2A4J426   A0A2H1V679   A0A0L7KS10   A0A194RJG2   A0A194PVX3   A0A212EXC8   + More
H9JC25   A0A1E1W6K4   A0A194PIY2   A0A212FIV9   A0A194RA99   A0A2H1VCZ2   A0A3S2NCQ4   A0A2M4BR23   A0A084W0N0   A0A2A4J5D1   A0A0P6G419   A0A2M4AH79   A0A0P5J2Y0   A0A2M4BN81   A0A2M4BNE8   A0A0L7LKP4   A0A0P5R2X0   A0A182JDE4   A0A2M4BN11   A0A0P5RFU0   A0A0P5UZI0   A0A0P5PAF8   A0A0P5JUR4   A0A0P5LDY8   A0A2M3Z3W1   A0A0N8BGH4   A0A0P6H574   A0A0P4ZEZ9   A0A0P5VXE0   A0A0P5ZZG8   A0A0P5RIK3   A0A0P5USG4   A0A2M3ZH10   A0A0P5WQ73   A0A0P5NSU1   T1EA29   A0A0P5QB03   F5HMU3   A0A1Y9J120   Q16XB6   A0A0P5NEE6   A0A182TWH8   E2A7T2   A0A0P5PAT8   A0A182TA50   A0A0P5LHD3   A0A1Y9IV43   A0A1Y1NIH2   A0A1Y9J0B9   A0A1Y1NJY8   A0A0N8DDX6   A0A182J0B7   A7UVQ1   A0A182MQE6   A0A195FXP7   A0A0P5BAF1   A0A084W0M9   A0A1Y9IVW0   A0A0P6J8U7   A0A0N0U587   A0A0P5D3E7   A0A0P4YDG6   A0A182VGL1   A0A158NMU5   E9FXS0   A0A1Y9J0K5   A0A1C7CZS3   A0A2C9GQR0   Q7PKK8   A0A182M6E0   A0A151IS07   Q16XB7   A0A1Y9J109   E2BHE4   A0A023ES54   A0A182V716   A0A310S9C3   Q7PX91   A0A182UKL8   A0A2M4CNC0   A0A226DFW5   A0A182L8Q7   A0A2C9GQH5   A0A1Y9IVK2   A0A195C1D6   A0A0P5KLK6   A0A1C9TA80   A0A2M4CNA8   A0A1Q3FUZ4   A0A151X0B2   A0A1Y9J115   A0A1Q3FUB8   Q16XB8  

Pubmed

26227816    26354079    22118469    19121390    24438588    12364791    + More
14747013    17210077    17510324    24657620    20798317    28004739    21347285    21292972    20966253    24945155   

EMBL

NWSH01003174    PCG66825.1    ODYU01000868    SOQ36276.1    JTDY01006581    KOB65870.1    + More
KQ460118    KPJ17692.1    KQ459596    KPI95280.1    AGBW02011785    OWR46149.1    BABH01014775    GDQN01008428    JAT82626.1    KQ459603    KPI93008.1    AGBW02008324    OWR53664.1    KQ460685    KPJ12786.1    ODYU01001885    SOQ38719.1    RSAL01000218    RVE44089.1    GGFJ01006368    MBW55509.1    ATLV01019123    KE525262    KFB43774.1    NWSH01002898    PCG67347.1    GDIQ01038663    JAN56074.1    GGFK01006647    MBW39968.1    GDIQ01211901    JAK39824.1    GGFJ01005331    MBW54472.1    GGFJ01005330    MBW54471.1    JTDY01000713    KOB76123.1    GDIQ01106445    JAL45281.1    GGFJ01005329    MBW54470.1    GDIQ01110646    JAL41080.1    GDIP01109340    JAL94374.1    GDIQ01135575    JAL16151.1    GDIQ01219308    JAK32417.1    GDIQ01171063    JAK80662.1    GGFM01002458    MBW23209.1    GDIQ01180067    JAK71658.1    GDIQ01034371    JAN60366.1    GDIP01226976    JAI96425.1    GDIP01094752    JAM08963.1    GDIP01037108    JAM66607.1    GDIQ01106446    JAL45280.1    GDIP01112339    JAL91375.1    GGFM01007085    MBW27836.1    GDIP01083148    JAM20567.1    GDIQ01159733    JAK91992.1    GAMD01000792    JAB00799.1    GDIQ01123340    JAL28386.1    AAAB01008987    EGK97615.1    KF686745    CH477543    AIN76713.1    EAT39257.1    GDIQ01146529    JAL05197.1    GL437384    EFN70512.1    GDIQ01152930    JAK98795.1    GDIQ01171064    JAK80661.1    GEZM01004174    JAV96445.1    GEZM01004173    JAV96446.1    GDIP01043239    JAM60476.1    EDO63275.2    AXCM01007933    KQ981200    KYN45082.1    GDIP01202629    JAJ20773.1    KFB43773.1    GDIQ01021378    JAN73359.1    KQ435791    KOX74402.1    GDIP01165974    JAJ57428.1    GDIP01229076    JAI94325.1    ADTU01002433    ADTU01002434    ADTU01002435    ADTU01002436    ADTU01002437    GL732526    EFX88146.1    APCN01000829    EAA43222.5    KQ981113    KYN09394.1    KF686744    AIN76712.1    EAT39256.1    GL448287    EFN84913.1    GAPW01001525    JAC12073.1    KQ767621    OAD53388.1    EAA01723.5    GGFL01002636    MBW66814.1    LNIX01000021    OXA43577.1    KQ978350    KYM94689.1    GDIQ01183656    JAK68069.1    KU681439    AOR07219.1    GGFL01002581    MBW66759.1    GFDL01003615    JAV31430.1    KQ982617    KYQ53796.1    GFDL01003851    JAV31194.1    KF686746    AIN76714.1    EAT39258.1   

Proteomes

UP000218220    UP000037510    UP000053240    UP000053268    UP000007151    UP000005204    + More
UP000283053    UP000030765    UP000075880    UP000007062    UP000076407    UP000008820    UP000075902    UP000000311    UP000075901    UP000075920    UP000075883    UP000078541    UP000053105    UP000075903    UP000005205    UP000000305    UP000075882    UP000075840    UP000078492    UP000008237    UP000198287    UP000078542    UP000075809   

PRIDE

H9JC25   

Pfam

PF01007   IRK        + More
PF17655   IRK_C

Interpro

IPR040445   Kir_TM        + More
IPR013518   K_chnl_inward-rec_Kir_cyto       
IPR016449   K_chnl_inward-rec_Kir       
IPR041647   IRK_C       
IPR014756   Ig_E-set       
IPR003274   K_chnl_inward-rec_Kir3.1       

SUPFAM

SSF81296   SSF81296       

Gene 3D

2.60.40.1400    

ProteinModelPortal

A0A2A4J426   A0A2H1V679   A0A0L7KS10   A0A194RJG2   A0A194PVX3   A0A212EXC8   + More
H9JC25   A0A1E1W6K4   A0A194PIY2   A0A212FIV9   A0A194RA99   A0A2H1VCZ2   A0A3S2NCQ4   A0A2M4BR23   A0A084W0N0   A0A2A4J5D1   A0A0P6G419   A0A2M4AH79   A0A0P5J2Y0   A0A2M4BN81   A0A2M4BNE8   A0A0L7LKP4   A0A0P5R2X0   A0A182JDE4   A0A2M4BN11   A0A0P5RFU0   A0A0P5UZI0   A0A0P5PAF8   A0A0P5JUR4   A0A0P5LDY8   A0A2M3Z3W1   A0A0N8BGH4   A0A0P6H574   A0A0P4ZEZ9   A0A0P5VXE0   A0A0P5ZZG8   A0A0P5RIK3   A0A0P5USG4   A0A2M3ZH10   A0A0P5WQ73   A0A0P5NSU1   T1EA29   A0A0P5QB03   F5HMU3   A0A1Y9J120   Q16XB6   A0A0P5NEE6   A0A182TWH8   E2A7T2   A0A0P5PAT8   A0A182TA50   A0A0P5LHD3   A0A1Y9IV43   A0A1Y1NIH2   A0A1Y9J0B9   A0A1Y1NJY8   A0A0N8DDX6   A0A182J0B7   A7UVQ1   A0A182MQE6   A0A195FXP7   A0A0P5BAF1   A0A084W0M9   A0A1Y9IVW0   A0A0P6J8U7   A0A0N0U587   A0A0P5D3E7   A0A0P4YDG6   A0A182VGL1   A0A158NMU5   E9FXS0   A0A1Y9J0K5   A0A1C7CZS3   A0A2C9GQR0   Q7PKK8   A0A182M6E0   A0A151IS07   Q16XB7   A0A1Y9J109   E2BHE4   A0A023ES54   A0A182V716   A0A310S9C3   Q7PX91   A0A182UKL8   A0A2M4CNC0   A0A226DFW5   A0A182L8Q7   A0A2C9GQH5   A0A1Y9IVK2   A0A195C1D6   A0A0P5KLK6   A0A1C9TA80   A0A2M4CNA8   A0A1Q3FUZ4   A0A151X0B2   A0A1Y9J115   A0A1Q3FUB8   Q16XB8  

PDB

3SPI     E-value=5.39739e-61,     Score=594

KEGG

101739998    K05330 potassium inwardly-rectifying channel subfamily J, other | (RefSeq) ATP-sensitive inward rect

GO

GO:0005242   GO:0034765   GO:0016021   GO:0006813   GO:0005244   GO:1990573   GO:0015467   GO:0004721   GO:0030145   GO:0043565   GO:0003677   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR11767  

Subcellular location

Membrane  

Length:

381

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

62.5421600000001

Exp number, first 60 AAs:

0.02504

Total prob of N-in:

0.99249

inside

1  -  84

TMhelix

85  -  107

outside

108  -  121

TMhelix

122  -  144

inside

145  -  164

TMhelix

165  -  187

outside

188  -  381

 

 

Pi

214.083138

Theta

189.069444

Tajima's D

0.423153

CLR

0.094062

CSRT

0.499075046247688

Interpretation

Uncertain