SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15439
Pre Gene Modal
BGIBMGA004749
Annotation
PREDICTED:_uncharacterized_protein_LOC101744071_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.787
 

Sequence

CDS
ATGCGCATTTTACTTATGTTATTACTTACACATTTTGCAACGTCAGCAGTAACTGAAAACCCGTTGCTAATGACAACTGGAAATTCTGATCAGATAGCAAAAACGGCTGAGTGCGTTTTAAAACTATCCGCAAAGTACTTCGTGGAGAGAAAAGCACTAAGCGGCAGCATAGTCATTATCAATGTTAACTCTTATTCGTCTACTACACAAGGGCTACTTTTGAAAACCATACATAGCAGCATAAAATACTCTGTTATGGCGAAGGACTCTTTTTACCCGCATGCGAACGCATCCCATTTCCCGGAGAAAGCCAAAAATTATATGTTGATTCTCGAAGAGAGAACTGAGTTAAAGCGGAACATATTTCAACTGAATAAGTTGCCTAGTTGGAATCCATTAGCTAAAGCTGTAGTTTTTTACCAAATCAAAGGAAACGAGAGTGCGCAACGAATCGCCATCGAGTTTATAAACGAACTGCGAGAACACAAATTTTTCAGGAGTATAATATTCATAAATAATGGAACGGAGTCTGGTGTTACGTCTTATACCTGGCGACCGTACAGTGAAAATAATTGTGGTGGAAAATGCGACTCTGTGTATGTGCTGGATCGGTGTAAAAACAATTTCGTAGAACAGATTGAACCTCAACCCGAATGGTTTCCTTCGAACATGAATGGCTGCCCGTTAACCACATACGCTATTGTTTCTGAACCGTATGTTATGCCCCCAATCAGAAAAATCCCGAATGCCAAATTCGATGACGTTTACGAATTCCAGAAAGGTGGAGAGACTAATTTAGTGAAAACAATCGCAGAGTTCTCCAATATGACATTAATTGTGCGATTATCAGCTATAGAAGAAAATTGGGGTATCATCTATGCGAACGGAACAGCCACCGGGGCTTATGGCGTATTGAGAAATGATTCTGTCGATATAGTTTTTGGGAACATTGAAGTTACCAAACAAATACGAAAATGGTTTCATCCGACAATCAGTTACACTCAAGATGAAATCACTTGGTGTTTACCTAAAGCCGGTCAAGCCTCTGCCTGGGACAACTTAGTCATTATATTCCAATGGACAATCTGGGTGGCGACATTCACTAGTCTCATTTTGATGGGCTTACTTTTTCACTACATGTATTACAGAGAGAAGAATAAGAAAATAACTAAATGGCCAACGAATTCATTACTTATGACTTTCAGTATGCTATTAGGATGGGGTTCGCATTTCGAACCGAAAACCGCCACATTCCGCATTTTGATCTTCGGTTGGCTGTGTTTCAGCATAAACATGGGGATTTCGTATGAGTCGTTCTTAAGAAGTTTCCTAATGCACCCCAGATTCGAGAAACAGATAGCTACAGAGTCAGACCTGATTCAATCTGGAATCCGTTTTGGCGGTAGAGAGATTTATCGTACCTATTTCGAATCTAATGATGCTTCCTCGTCTTATTTGCACACCGAGTATAGCTCCACTACGTTTTCTGAGGGGATAAGGCGTGCCGCTTTGAATCGCGATTTCGCCGTCGTGTCTTCAAGGAGACAGGCTGAGTACCAAGATCAGAAATTAGGGAAAGGTGCGTCGTTGATTTATTGCTTCCCTGAAAGTGATAATTTATATAAATACAGCGTCGTATTGTTGGCTAGGAAATGGTTTCCGATGTTGGAAAGGTTCAACGGTATAATACGTAGCGTTTCCGAGAACGGTTTGATAAATAAATGGAACGATGAGATGTTTATTCATAGGGTTTCGTTGGAGGGAGCGAGTACTATTGTGCCGTTAAGCATTCAGCATTTGTTGGGAGCGTTTATGTTTATTGGTTTCATGTACGGAACTAGTGCTTTTATTTTTCTTGTAGAAGTCTTTGTTGGTTTCGTGCAAAGGAGAGCTTTCTTATCGGCGTTTTTCTGTGGAAAAAAGAAACGTTTTTCAGCTGTTTTTAAAGTTAAAGTGTAG
Protein
MRILLMLLLTHFATSAVTENPLLMTTGNSDQIAKTAECVLKLSAKYFVERKALSGSIVIINVNSYSSTTQGLLLKTIHSSIKYSVMAKDSFYPHANASHFPEKAKNYMLILEERTELKRNIFQLNKLPSWNPLAKAVVFYQIKGNESAQRIAIEFINELREHKFFRSIIFINNGTESGVTSYTWRPYSENNCGGKCDSVYVLDRCKNNFVEQIEPQPEWFPSNMNGCPLTTYAIVSEPYVMPPIRKIPNAKFDDVYEFQKGGETNLVKTIAEFSNMTLIVRLSAIEENWGIIYANGTATGAYGVLRNDSVDIVFGNIEVTKQIRKWFHPTISYTQDEITWCLPKAGQASAWDNLVIIFQWTIWVATFTSLILMGLLFHYMYYREKNKKITKWPTNSLLMTFSMLLGWGSHFEPKTATFRILIFGWLCFSINMGISYESFLRSFLMHPRFEKQIATESDLIQSGIRFGGREIYRTYFESNDASSSYLHTEYSSTTFSEGIRRAALNRDFAVVSSRRQAEYQDQKLGKGASLIYCFPESDNLYKYSVVLLARKWFPMLERFNGIIRSVSENGLINKWNDEMFIHRVSLEGASTIVPLSIQHLLGAFMFIGFMYGTSAFIFLVEVFVGFVQRRAFLSAFFCGKKKRFSAVFKVKV

Summary

EMBL
BABH01028180    KX084509    ARO76464.1    LC017796    BAR64810.1    ODYU01001067    + More
SOQ36790.1    MH193966    AZB49412.1    GENK01000122    JAV45791.1    NWSH01000209    PCG78383.1    KY325458    AQM73619.1    JTDY01006798    KOB65680.1    KY283578    AST36238.1    KY225537    ARO70549.1    JN836720    AFC91760.2    MG820689    AXF48860.1    MF625610    AXY83437.1    GCVX01000143    JAI18087.1    KU702636    AMM70663.1    KT588081    AOE47991.1    AGBW02012567    OWR44808.1    KQ459596    KPI95278.1    AXCM01015069    AXCN02001158    ATLV01014439    KE524972    KFB38749.1    APCN01002560    JXUM01015423    KQ560429    KXJ82457.1    JXUM01001761    KQ560127    KXJ84327.1    CH477788    EAT36213.1    DS231912    EDS25845.1    EAT36214.1    CVRI01000004    CRK87351.1    AJWK01033562    JXUM01015424    KXJ82458.1    CVRI01000006    CRK87905.1    CRK87864.1    UFQT01000509    SSX24852.1    KXJ84326.1    GEZM01097657    JAV54161.1    UFQS01000221    UFQT01000221    SSX01560.1    SSX21940.1    DS497678    EFA11918.1    KK853197    KDR09956.1    KK852427    KDR24123.1    NEVH01011202    PNF31732.1    KK852483    KDR22847.1    PYGN01000473    PSN45722.1    NEVH01006567    PNF37868.1    NEVH01020342    PNF21456.1    PYGN01002101    PSN31492.1    PYGN01000432    PSN46493.1    NEVH01014356    PNF27931.1    NEVH01024949    PNF16419.1    PYGN01000978    PSN38746.1    PSN38753.1    PYGN01000252    PSN50089.1    KK852749    KDR17222.1    NEVH01007822    PNF35288.1    GDKB01000022    JAP38474.1    NEVH01016344    PNF25358.1    KY325453    AQM73614.1    PYGN01000235    PSN50538.1    NEVH01003737    PNF40412.1    PYGN01001824    PSN32653.1    KK853123    KDR11041.1    PSN45721.1    PYGN01001122    PSN37418.1    KQ972879    KXZ75746.1    KY283701    AST36360.1    NEVH01016291    PNF26182.1    KK852798    KDR16369.1    NEVH01012087    PNF30787.1    NEVH01020335    PNF21729.1    PYGN01000219    PSN50894.1    PSN31493.1    PYGN01002421    PSN30525.1    PYGN01000050    PSN56157.1    KK852871    KDR14577.1    NEVH01013553    PNF28758.1    PYGN01001306    PSN35821.1    PSN56158.1    NEVH01020850    PNF21340.1    KK852806    KDR16092.1    PSN56159.1   
Pfam
PF00060   Lig_chan        + More
PF00497   SBP_bac_3
PF10613   Lig_chan-Glu_bd
Interpro
IPR001320   Iontro_rcpt        + More
IPR001638   Solute-binding_3/MltF_N       
IPR019594   Glu/Gly-bd       
PDB
6CNA     E-value=0.00161859,     Score=100

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.996141
 
 
Length:
652
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
76.8241000000001
Exp number, first 60 AAs:
0.03125
Total prob of N-in:
0.00476
outside
1  -  359
TMhelix
360  -  382
inside
383  -  417
TMhelix
418  -  440
outside
441  -  604
TMhelix
605  -  627
inside
628  -  652
 
 

Population Genetic Test Statistics

Pi
325.138341
Theta
229.979425
Tajima's D
1.506861
CLR
0
CSRT
0.787960601969901
Interpretation
Uncertain
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