Gene

KWMTBOMO15438

Pre Gene Modal

BGIBMGA004748

Annotation

PREDICTED:_neurexin-1-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr25(+):13069190-13163199      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.114 Nuclear   Reliability : 1.521

CDS

ATGGGTCTCGGAAACGGTAAGCAGGAGATGCACATCAAACCGTCTAAGACGAGATTCGATGATCATCAGTGGCATAAGTTAACGGTGCACAGAAGGATACAGGAGGTAACTTCGTTCACCAGTTTTTGCAGGGTATCAGCGATAGTCGATGACGTATATTCGGATCATTCCCATGTGGCCGGGTCCTTCACAATGTTGGCGAGTTCAAGGGCTCATGTCGGAGGATCTTTGAATGCCAGAGCCTTGCCCGGTGCCAGGGTCCATACTAATTTTATTGGATGCTTAAAGAAGGTGGAGTTCTCAGCGGATACTCTTCGACTGAACCTCATCGACTTAGCTAGAACGGGCAGCAAATTGATAACCGTAACAGGAAGGTTGGAATACTCCTGCATAGCTACCGACTCTGCGGACCCAGTTACGTTCACCACTAGGGACGCCCATTTGATACTACCAAAATGGGAAGCAGTGAAGACAGGAACAATATCGTTCAAATTTCGAACGAACGAACCGAATGGACTGATCTTATTCAACATGGGCGCCAAGCCACCAAGGGCTGACCTTTTTGCTGTGGAGATCCTCAATGGCTATATCTACGTGCACGTCGATCTTGGATCTGGCGGGGTTAAGGTTCGAGCATCCAGGAGACGGGTGGACGATTCACTCTGGCATGACTTCCTCCTGAGGAGAAGTGGCAGAGACGGCAGAGTTACTGTTGATGGTGCCAACGCTGAGTTTAAGACTCCTGGTGAATCTAATCAGCTGGAGCTGGACGGTCCTCTGTACGTCGGTGGACTCGGTTCAGAGTACTCAGCTTCCAGAACCCCACCGGTTCTTTGGACGGCTGCCCTTAGACAAGGTTTCGTTGGCTGCGTTAGGGACTTGACGCTGAACGGAAAATCTCAGGATCTGACGGCTTTTGCACGACAGCAAGATTCTGCATCAGTGCGCCCAGCCTGCCACGTGCTGATGAAGCAGTGCGTGAGTTCCCCGTGCCAGCACGGCGGGATCTGCTCCGAGGGATGGAACAGACCCCTGTGCAATTGTTCTGCTACGAACTACGGCGGACCGACTTGTGGAAGAGAGTCACCAACAATATTCCTCAACGGCAGCCAGCACCTCACAGCGTCTCTAGGGCCAGAGCACGTGACCCAGACGGAGGAATTAATGCTTCGATTCAGGACCAGTAGGGCTGGTCTCTTGCTGCGAACCGCATCAGAGCATTCGGCGGATCGAATAGAATTGGCCGTAGCTGCTGGTCGGATCAGAGCGAGCGTCAGGCTTGGAGACAGGGAGAAGAACCTTCTAGCAGGAACTAACGTAGCGGACGACAACTGGCACACGGTCCGGTTCTCCCGCCGGGCCTCGAACCTGAGGCTGCAGGTTGACGGGGCGGCCTCGGTGCGCGCCGAAACCATACTAGGCAAGGCGTCGACTTTAGAGATATCGACCCTACATCTCGGCGGATTGTACCACCCGGAGGAGGAAATCCAGATGACCTCGACATTACCAAACTTCGTTGGATACATACAGAAATTCGTTTTCAACGGCATCAAGTATATCGATATGGCCAAAGCACTCGGCGTCGGAAGCGGCGAAGAGCACAACCGTATATACGACACGTCGAATATAATTTTCAACGGGAGATTCGTGAAGCCAGACTCCCTGAACGTTTACAAAGCGGTTACATTCAAATCGAAGCACACGTACGTGGGGCTGCCATTGTTGAAGGCTTACGCGAACACGTATCTAGACTTTTACTTCAGAACGACAGAAATGGACGGTCTGTTGTTTTACAACGGCGGCAAGAAGCAGGATTTCATTGCCATAGAATTAGTGAGCGGGCATGTTCACTGCGTCTTCAATCTGGGCGATGGCGTGGTCACAATGAAGGACAAACTGAAGAACTTCTTGAACGACAACCGATGGCACACCGTGTCGGTCAGACGGCCCACGCCGAAGATACACACACTACAAGTCGACGATGACATCGAAATGCACACGACTAGCTCGAATCTAATGTTGGAACTAGACAGTGTCTTGTACGTAGGAGGCGTGCCCAAGGACATGTATACTGTACTGCCGGTGGGCGTGTTGTCCAGGCAAGGTTTCGAAGGTTGCATGTCCAGCCTTGACCTGCCAGGGGAATCGCCATCATTATTAGAGGATGCCGTTGTACCTAGCTCGTCTTTGGGGTCTGGATGCGAAGGTCCAACGAAGTGCACCCACAACGCATGCGCGAACAAGGGTGTGTGCGTGCAGCAGTGGAACACGTACGTGTGTGATTGCGACCTCACGTCCTTCACTGGGCCCACGTGCTACGACGAATCAATAGCTTACGAATTCGGACCAAGCAGAGGGACAATAACCTACACGTTCCCGCCCAGCTCAGTAGCGGATACGGAGATGGACAAAGTGGCGTTAGGCTTCGTCACCAGCAAGGCAGATGCTGTGTTACTGAAAATCGAGTCTTCAAACACTCAAGATTATATGCAGATGGAGATTATTCGCGGAAACCTTTTCATGGTGTACAACGTTGGTGCTGGTGACCATCCGCTCGGCGACGAGACGACCAGGGTCGATGATGGAGCGTACCACGTGGCGAGGTTTACGAGGAACGGCAGCCGATCGTCGCTCCAGCTCGACAACTATGACGTCATCATTCGGCATCCGCAAGGTGGTCAGCAGTCGACGATCTTCAACAGCATGTCGGTGGTGACGGTGGGCGGCGGCGGCGGCTCGGCGCGCCCGTACAGCGGCGTGCTGGCGGGGCTGGTGGTGGACGGCGTGCGCGTGCTGGAGCTGGCGGCGGCCGGCGACCCCGCCGTGTCCGTGCGCGGTGACGTCAGACGTGCGCACGCGCCGCTCGACAGGGACATCAACAGGATGCAACAGACCCCGCCATCGGGCTACGGAGGGCCGGGAGTACTGGACGAGCTCGTATACTCGGGAGCAGGCTCAGGATGCCGAGATGATGACGAAGACGCGTGCGTACTCCCCGACGCAGGGTCTGGTGATGACCTCATCACTCCCGTTTATGTACCTTCGACTAGGAGACCACCTTCGAAGACGCATAAGGGCGACACGAGTGGTAAGCTGATGAAGCCTTGCGACGACGAGGACTGCATCGAAGGTTCAGGGTCCAACGGCGAAGAGATCACGGAACCAGAACGTCCGGCGACAACGTCGATGTCGTCCAGCACGCACAGCATGACGCCGCCCGCGCCCGCCACCACGGAGCGGCTGCGGCCCGACGTGACGTCACCCGACGTGACGTCACACGAGGTGCCGCGCACCACGCTGCCCGACCACGACAACATCCACGCCGCCACGTTCGGCGTGCACACCGAGACCAACAGAAAGACAACCCCGGACGATCACACGCATACGGCGCATTTCACTCCGACCGATCGCCACGAAGAGGAGCCGACGCACACCACCGCCGAGGACACCAACCACATGCCGGAGTACGAAGACCGCAACGAGAACGAGATAGAAGCTCGCACGCCCACCTACGAGATCGAGGGGGAGCAGGACAGAGCACCCGGGCGAGTCCACCCGGACTACAACGGCTACGAGCACGAGATCACCACCAAGTGGTATCACCCGAAGACGACGGACAACAGAGTCGTGCCGCCAGAGTCGGAGTTCTTTGCCACTATCGTTGGCATAGTGGCGTCGATACTGATAGCCATAATATTGATAGTCATAATTGTGCTCAAATACATCGTGTTCAAGTTCGACCCTTCGTACAAAGTCACAGAGGACAAGAATTACCAGCAAGGAGCCAGCGCCGCGTTGCTAGGCAACCAGAGTCACTCTGGATACCAGACGGGAGTGCAGGGCGGCGTGGCGGCGGGGGGGCAGGGGGGCGCGGGCCGACCCCTGCAGCCGCTCGCCGCGCCCCCTCCCCACCCTGTCAAGAGGGACGGAATCAAGGAGTGGTACGTCTAG

Protein

MGLGNGKQEMHIKPSKTRFDDHQWHKLTVHRRIQEVTSFTSFCRVSAIVDDVYSDHSHVAGSFTMLASSRAHVGGSLNARALPGARVHTNFIGCLKKVEFSADTLRLNLIDLARTGSKLITVTGRLEYSCIATDSADPVTFTTRDAHLILPKWEAVKTGTISFKFRTNEPNGLILFNMGAKPPRADLFAVEILNGYIYVHVDLGSGGVKVRASRRRVDDSLWHDFLLRRSGRDGRVTVDGANAEFKTPGESNQLELDGPLYVGGLGSEYSASRTPPVLWTAALRQGFVGCVRDLTLNGKSQDLTAFARQQDSASVRPACHVLMKQCVSSPCQHGGICSEGWNRPLCNCSATNYGGPTCGRESPTIFLNGSQHLTASLGPEHVTQTEELMLRFRTSRAGLLLRTASEHSADRIELAVAAGRIRASVRLGDREKNLLAGTNVADDNWHTVRFSRRASNLRLQVDGAASVRAETILGKASTLEISTLHLGGLYHPEEEIQMTSTLPNFVGYIQKFVFNGIKYIDMAKALGVGSGEEHNRIYDTSNIIFNGRFVKPDSLNVYKAVTFKSKHTYVGLPLLKAYANTYLDFYFRTTEMDGLLFYNGGKKQDFIAIELVSGHVHCVFNLGDGVVTMKDKLKNFLNDNRWHTVSVRRPTPKIHTLQVDDDIEMHTTSSNLMLELDSVLYVGGVPKDMYTVLPVGVLSRQGFEGCMSSLDLPGESPSLLEDAVVPSSSLGSGCEGPTKCTHNACANKGVCVQQWNTYVCDCDLTSFTGPTCYDESIAYEFGPSRGTITYTFPPSSVADTEMDKVALGFVTSKADAVLLKIESSNTQDYMQMEIIRGNLFMVYNVGAGDHPLGDETTRVDDGAYHVARFTRNGSRSSLQLDNYDVIIRHPQGGQQSTIFNSMSVVTVGGGGGSARPYSGVLAGLVVDGVRVLELAAAGDPAVSVRGDVRRAHAPLDRDINRMQQTPPSGYGGPGVLDELVYSGAGSGCRDDDEDACVLPDAGSGDDLITPVYVPSTRRPPSKTHKGDTSGKLMKPCDDEDCIEGSGSNGEEITEPERPATTSMSSSTHSMTPPAPATTERLRPDVTSPDVTSHEVPRTTLPDHDNIHAATFGVHTETNRKTTPDDHTHTAHFTPTDRHEEEPTHTTAEDTNHMPEYEDRNENEIEARTPTYEIEGEQDRAPGRVHPDYNGYEHEITTKWYHPKTTDNRVVPPESEFFATIVGIVASILIAIILIVIIVLKYIVFKFDPSYKVTEDKNYQQGASAALLGNQSHSGYQTGVQGGVAAGGQGGAGRPLQPLAAPPPHPVKRDGIKEWYV

Uniprot

H9J5F8   A0A0U2K606   A0A2A4K3Z9   A0A2H1V7J8   A0A194RK32   A0A194PPN7   + More
A0A212ETK3   A0A1B0CF69   A0A336N0B0   A0A084VES3   Q7PSM9   Q177B3   A0A1I8JU62   A0A1J1J3X1   A0A1I8NI78   A0A2M4CX37   A0A034W6V4   W8B8N0   A0A0L0CEI3   A0A034WAY8   A0A0A1X0M7   A0A0K8VNW6   A0A0K8WLQ9   B4MB86   A0A0K8VCX1   B4NAE7   Q298U9   A0A1W4W394   A0A1Y9J0H9   B4KC19   B3P7H8   Q9VCZ9   B4PMA4   B4HE98   B3MTJ6   A0A3B0K617   A0A3B0K1F4   A0A0Q9X1D3   A0A0R3NKY1   B4JSB3   A0A1W4VQJ7   A0A1W4W1T0   W8AK04   A0A0Q9X2Z6   A5HBQ4   Q3KN41   A0A0R1E473   A0A0R1E4P0   A0A1I8NI73   A0A0Q9WTV7   A0A0R3NH30   A0A3B0K4A6   A0A0P9BMD6   A0A1W4VQK3   A0A0B4KH61   A0A0R1EAE1   A0A3B0KQJ5   A0A0R3NLZ6   A0A0Q9X3A3   A0A0Q9XA33   A0A0Q9X4S7   A0A0B4KGL0   A0A0N8NZ00   A0A0M4EQG8   A0A1W4VQ90   A0A1W4W2N0   A0A0R1E4A5   A0A0P8Y2T0   A0A1W4W1T5   A0A0R1E965   A0A0P8XDQ3   A0A182TUV4   A0A0Q9WSX1   A0A0R3NHJ1   A0A1W4VQ97   A0A0B4KGQ3   A0A0Q9X2W7   A0A3B0K1L2   A0A0R1E499   A0A0P8XEI6   B0X240   A0A336M667   A0A1B0BEH7   A0A182V916   A0A139WFE8   A0A139WFE0   T1HU00   F4WZ00   A0A158NCS4   A0A0C9R3P4   A0A3L8D536   A0A0C9QZT5   K7J1E6   B9VMQ2   A0A0P4Z467  

Pubmed

19121390    26749290    26354079    22118469    24438588    12364791    + More
14747013    17210077    17510324    25315136    25348373    24495485    26108605    25830018    17994087    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    17785181    26471740    18362917    19820115    21719571    21347285    30249741    20075255    17069637    18974885   

EMBL

BABH01028182    BABH01028183    BABH01028184    KP308210    ALH43428.1    NWSH01000209    + More
PCG78382.1    ODYU01001067    SOQ36791.1    KQ460118    KPJ17695.1    KQ459596    KPI95277.1    AGBW02012567    OWR44807.1    AJWK01009742    AJWK01009743    AJWK01009744    AJWK01009745    AJWK01009746    AJWK01009747    UFQT01002801    SSX34087.1    ATLV01012289    ATLV01012290    KE524778    KFB36467.1    AAAB01008817    EAA05336.6    CH477379    EAT42236.1    CVRI01000070    CRL07096.1    GGFL01005593    MBW69771.1    GAKP01007666    JAC51286.1    GAMC01020416    GAMC01020415    JAB86139.1    JRES01000501    KNC30666.1    GAKP01007667    JAC51285.1    GBXI01010007    JAD04285.1    GDHF01011733    JAI40581.1    GDHF01000206    JAI52108.1    CH940656    EDW58357.2    GDHF01015612    JAI36702.1    CH964232    EDW80761.1    CM000070    EAL27856.3    CH933806    EDW16892.2    CH954182    EDV54139.1    AE014297    AAF56006.1    AGB96217.1    CM000160    EDW98009.1    CH480815    EDW43195.1    CH902623    EDV30586.1    OUUW01000013    SPP88122.1    SPP88125.1    KRF99331.1    KRT00319.1    CH916373    EDV94653.1    GAMC01020413    JAB86142.1    KRG02364.1    EF460788    ABQ10624.1    BT023898    ABA81832.1    ACZ94983.1    AGB96218.1    AGB96222.1    AHN57466.1    KRK04059.1    KRK04057.1    KRF99332.1    KRT00318.1    SPP88123.1    KPU72939.1    AGB96221.1    KRK04055.1    SPP88126.1    KRT00317.1    KRF99334.1    KRG02362.1    KRG02361.1    AGB96220.1    KPU72940.1    CP012526    ALC47238.1    KRK04056.1    KPU72938.1    KRK04058.1    KPU72936.1    KRF99333.1    KRT00316.1    AGB96219.1    KRG02363.1    SPP88124.1    KRK04054.1    KPU72937.1    DS232279    EDS38970.1    UFQS01000390    UFQT01000390    SSX03502.1    SSX23867.1    JXJN01012903    JXJN01012904    JXJN01012905    JXJN01012906    KQ971352    KYB26674.1    KYB26673.1    ACPB03011671    ACPB03011672    GL888463    EGI60654.1    ADTU01011744    ADTU01011745    ADTU01011746    ADTU01011747    ADTU01011748    ADTU01011749    ADTU01011750    ADTU01011751    ADTU01011752    ADTU01011753    GBYB01007417    JAG77184.1    QOIP01000014    RLU15123.1    GBYB01001230    JAG70997.1    FJ580046    ACM48184.1    GDIP01218212    JAJ05190.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000092461    + More
UP000030765    UP000007062    UP000008820    UP000075900    UP000183832    UP000095301    UP000037069    UP000008792    UP000007798    UP000001819    UP000192221    UP000076407    UP000009192    UP000008711    UP000000803    UP000002282    UP000001292    UP000007801    UP000268350    UP000001070    UP000092553    UP000075902    UP000002320    UP000092460    UP000075903    UP000007266    UP000015103    UP000007755    UP000005205    UP000279307    UP000002358   

PRIDE

H9J5F8    Q9VCZ9    A5HBQ4    Q3KN41   

Pfam

PF02210   Laminin_G_2        + More
PF00008   EGF
PF12661   hEGF
PF00054   Laminin_G_1
PF01034   Syndecan

Interpro

IPR013320   ConA-like_dom_sf        + More
IPR000742   EGF-like_dom       
IPR001791   Laminin_G       
IPR013032   EGF-like_CS       
IPR027789   Syndecan/Neurexin_dom       
IPR001881   EGF-like_Ca-bd_dom       

SUPFAM

SSF49899   SSF49899       

ProteinModelPortal

H9J5F8   A0A0U2K606   A0A2A4K3Z9   A0A2H1V7J8   A0A194RK32   A0A194PPN7   + More
A0A212ETK3   A0A1B0CF69   A0A336N0B0   A0A084VES3   Q7PSM9   Q177B3   A0A1I8JU62   A0A1J1J3X1   A0A1I8NI78   A0A2M4CX37   A0A034W6V4   W8B8N0   A0A0L0CEI3   A0A034WAY8   A0A0A1X0M7   A0A0K8VNW6   A0A0K8WLQ9   B4MB86   A0A0K8VCX1   B4NAE7   Q298U9   A0A1W4W394   A0A1Y9J0H9   B4KC19   B3P7H8   Q9VCZ9   B4PMA4   B4HE98   B3MTJ6   A0A3B0K617   A0A3B0K1F4   A0A0Q9X1D3   A0A0R3NKY1   B4JSB3   A0A1W4VQJ7   A0A1W4W1T0   W8AK04   A0A0Q9X2Z6   A5HBQ4   Q3KN41   A0A0R1E473   A0A0R1E4P0   A0A1I8NI73   A0A0Q9WTV7   A0A0R3NH30   A0A3B0K4A6   A0A0P9BMD6   A0A1W4VQK3   A0A0B4KH61   A0A0R1EAE1   A0A3B0KQJ5   A0A0R3NLZ6   A0A0Q9X3A3   A0A0Q9XA33   A0A0Q9X4S7   A0A0B4KGL0   A0A0N8NZ00   A0A0M4EQG8   A0A1W4VQ90   A0A1W4W2N0   A0A0R1E4A5   A0A0P8Y2T0   A0A1W4W1T5   A0A0R1E965   A0A0P8XDQ3   A0A182TUV4   A0A0Q9WSX1   A0A0R3NHJ1   A0A1W4VQ97   A0A0B4KGQ3   A0A0Q9X2W7   A0A3B0K1L2   A0A0R1E499   A0A0P8XEI6   B0X240   A0A336M667   A0A1B0BEH7   A0A182V916   A0A139WFE8   A0A139WFE0   T1HU00   F4WZ00   A0A158NCS4   A0A0C9R3P4   A0A3L8D536   A0A0C9QZT5   K7J1E6   B9VMQ2   A0A0P4Z467  

PDB

3QCW     E-value=0,     Score=1869

KEGG

101744215    K07377 neurexin | (RefSeq) neurexin-1-like

GO

GO:0016021   GO:0051124   GO:1900073   GO:0007268   GO:1900244   GO:0072553   GO:0019901   GO:0061174   GO:2000331   GO:0040012   GO:0050808   GO:0007274   GO:0048488   GO:0040011   GO:0097109   GO:0007416   GO:0008306   GO:0071938   GO:0031594   GO:0034185   GO:0097105   GO:0097118   GO:0042043   GO:0043195   GO:0099056   GO:0098820   GO:0046872   GO:0005509   GO:0005515   GO:0043169   GO:0000287   GO:0004721   GO:0030145   GO:0043565   GO:0003677   GO:0003707   GO:0006281   GO:0006259  

Length:

1316

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.9728

Exp number, first 60 AAs:

4e-05

Total prob of N-in:

0.00018

outside

1  -  1216

TMhelix

1217  -  1239

inside

1240  -  1316

 

 

Pi

271.252371

Theta

176.394384

Tajima's D

1.598049

CLR

0.285573

CSRT

0.813409329533523

Interpretation

Uncertain