Gene

KWMTBOMO15436

Pre Gene Modal

BGIBMGA004747

Annotation

PREDICTED:_neurexin-2-like_[Bombyx_mori]

Location

Bomo_Chr25(+):13007130-13014839      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.949

CDS

ATGCCGTCTGCCGTCGCGACCATGCGCTACGCACTCCTATGCTTGCTCTCCTTCTCGCTCAGCACAACCTTCGCTTTCGTGCTCGACAAGCAAAACCCATACTCCCAATTCAGGAAGTGGAACGCGGGCCTCAACGGAACCATAGAAATTGAATTCAAAACCGACCAGCCGAACGGTTTACTTTTGTATACGGACGACGGTGGCACTTATGACTTTTTCGAATTGAAACTCGTTAATGGAGGTTTGAGATTGAGATACAATTTGGGAGGCGGCGCGCAGATTTTAACTGTCGGAAATAATCTCAATGATGGACATTGGCACAAAGTTCAGGTGGCCCGAAGAGACGAGCACACAACCTTGACAGTGGACGGCATCAGCCAAACGAAAACGTCTAGAGGAAAAGAATTCGCCTTCGGGAAGTTCACAACCAACTCTGATGTCTTCGTCGGCGGGATTCCACCGTCGTGA

Protein

MPSAVATMRYALLCLLSFSLSTTFAFVLDKQNPYSQFRKWNAGLNGTIEIEFKTDQPNGLLLYTDDGGTYDFFELKLVNGGLRLRYNLGGGAQILTVGNNLNDGHWHKVQVARRDEHTTLTVDGISQTKTSRGKEFAFGKFTTNSDVFVGGIPPS

Uniprot

H9J5F7   A0A2H1VF58   A0A194PPA8   A0A2A4J011   A0A194RNV1   A0A212F4Q1   + More
A0A0U2K606   A0A182QSM4   A0A182V7V1   A0A182YF24   A0A2P8YRY5   A0A2J7QRY0   A0A182IM21   A0A1B6MC53   A0A1J1J3X1   A0A1Y9J0H9   A0A1I8JU62   Q7PSM9   A0A026VSS0   A0A1B0CF69   A0A084VES3   A0A2M4CX37   A0A3L8D3S0   A0A1A9UZ24   A0A195EBC5   A0A0J7NPX2   A0A1B0BEH7   E2CAF8   A0A195F944   A0A1A9WY46   A0A0L7QTC4   A0A195BY08   A0A195CE54   A0A2A3EPD9   A0A151WFQ0   E2AZ11   A0A0M9A745   A0A1I8NI73   A0A1I8NI78   N6UED8   U4UDQ5   A0A310SSP8   A0A1I8PXC0   A0A1W4W399   A0A0A1X0M7   A0A0L0CEI3   A0A0K8VCX1   A0A0K8WLQ9   A0A0K8VNW6   A0A1W4VQK3   A0A1W4VQJ7   A0A1W4VQ97   A0A1W4W1T5   A0A1W4W2N0   A0A1W4VQ90   A0A1W4W394   A0A1W4W1T0   T1HU00   A0A139WFE8   A0A139WFE0   W8AK04   W8B8N0   A0A0N8NZ00   A0A0P8XDQ3   A0A0B4KH61   A0A0P8XEI6   A0A0M4EQG8   B3MTJ6   A0A0R1E965   A0A0R1EAE1   A0A0P9BMD6   A0A0P8Y2T0   Q3KN41   A0A0B4KGQ3   B4PMA4   A0A0B4KGL0   A0A0R1E4A5   A0A0R1E499   A0A0R1E4P0   Q9VCZ9   A0A0R1E473   B4HE98   B3P7H8   A0A0Q9XA33   A0A0Q9X2Z6   A0A0Q9X4S7   B4KC19   A5HBQ4   A0A0Q9X2W7   B9VMQ2   B9VMQ3   A0A158NCS4   F4WZ00   A0A088AL32   A0A0Q9WTV7   B4JSB3   A0A0Q9X3A3   A0A0Q9WSX1   A0A0Q9X1D3   B4NAE7  

Pubmed

19121390    26354079    22118469    26749290    25244985    29403074    + More
12364791    14747013    17210077    24508170    24438588    30249741    20798317    25315136    23537049    25830018    26108605    18362917    19820115    24495485    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    26109357    26109356    26471740    17785181    17069637    18974885    21347285    21719571   

EMBL

BABH01028195    ODYU01002243    SOQ39465.1    KQ459596    KPI95276.1    NWSH01004454    + More
PCG65086.1    KQ460118    KPJ17696.1    AGBW02010323    OWR48718.1    KP308210    ALH43428.1    AXCN02001190    PYGN01000399    PSN47018.1    NEVH01011882    PNF31352.1    GEBQ01006466    JAT33511.1    CVRI01000070    CRL07096.1    AAAB01008817    EAA05336.6    KK108596    EZA46675.1    AJWK01009742    AJWK01009743    AJWK01009744    AJWK01009745    AJWK01009746    AJWK01009747    ATLV01012289    ATLV01012290    KE524778    KFB36467.1    GGFL01005593    MBW69771.1    QOIP01000014    RLU15125.1    KQ979236    KYN22139.1    LBMM01002666    KMQ94505.1    JXJN01012903    JXJN01012904    JXJN01012905    JXJN01012906    GL453976    EFN75069.1    KQ981727    KYN37125.1    KQ414745    KOC61892.1    KQ976396    KYM92828.1    KQ977873    KYM99154.1    KZ288209    PBC32999.1    KQ983211    KYQ46615.1    GL444048    EFN61329.1    KQ435733    KOX77293.1    APGK01025941    APGK01025942    KB740605    ENN80070.1    KB632095    ERL88726.1    KQ759792    OAD62847.1    GBXI01010007    JAD04285.1    JRES01000501    KNC30666.1    GDHF01015612    JAI36702.1    GDHF01000206    JAI52108.1    GDHF01011733    JAI40581.1    ACPB03011671    ACPB03011672    KQ971352    KYB26674.1    KYB26673.1    GAMC01020413    JAB86142.1    GAMC01020416    GAMC01020415    JAB86139.1    CH902623    KPU72940.1    KPU72936.1    AE014297    AGB96221.1    KPU72937.1    CP012526    ALC47238.1    EDV30586.1    CM000160    KRK04058.1    KRK04055.1    KPU72939.1    KPU72938.1    BT023898    ABA81832.1    ACZ94983.1    AGB96218.1    AGB96222.1    AHN57466.1    AGB96219.1    EDW98009.1    AGB96220.1    KRK04056.1    KRK04054.1    KRK04057.1    AAF56006.1    AGB96217.1    KRK04059.1    CH480815    EDW43195.1    CH954182    EDV54139.1    CH933806    KRG02362.1    KRG02364.1    KRG02361.1    EDW16892.2    EF460788    ABQ10624.1    KRG02363.1    FJ580046    ACM48184.1    FJ580047    ACM48185.1    ADTU01011744    ADTU01011745    ADTU01011746    ADTU01011747    ADTU01011748    ADTU01011749    ADTU01011750    ADTU01011751    ADTU01011752    ADTU01011753    GL888463    EGI60654.1    CH964232    KRF99332.1    CH916373    EDV94653.1    KRF99334.1    KRF99333.1    KRF99331.1    EDW80761.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000007151    UP000075886    + More
UP000075903    UP000076408    UP000245037    UP000235965    UP000075880    UP000183832    UP000076407    UP000075900    UP000007062    UP000053097    UP000092461    UP000030765    UP000279307    UP000078200    UP000078492    UP000036403    UP000092460    UP000008237    UP000078541    UP000091820    UP000053825    UP000078540    UP000078542    UP000242457    UP000075809    UP000000311    UP000053105    UP000095301    UP000019118    UP000030742    UP000095300    UP000192221    UP000037069    UP000015103    UP000007266    UP000007801    UP000000803    UP000092553    UP000002282    UP000001292    UP000008711    UP000009192    UP000005205    UP000007755    UP000005203    UP000007798    UP000001070   

PRIDE

H9J5F7    Q3KN41    Q9VCZ9    A5HBQ4   

Pfam

PF02210   Laminin_G_2        + More
PF00008   EGF
PF12661   hEGF
PF00054   Laminin_G_1
PF01034   Syndecan

Interpro

IPR013320   ConA-like_dom_sf        + More
IPR001791   Laminin_G       
IPR000742   EGF-like_dom       
IPR013032   EGF-like_CS       
IPR035973   Cyt_c_oxidase_su3-like_sf       
IPR001881   EGF-like_Ca-bd_dom       
IPR027789   Syndecan/Neurexin_dom       

SUPFAM

SSF49899   SSF49899        + More
SSF81452   SSF81452       

ProteinModelPortal

H9J5F7   A0A2H1VF58   A0A194PPA8   A0A2A4J011   A0A194RNV1   A0A212F4Q1   + More
A0A0U2K606   A0A182QSM4   A0A182V7V1   A0A182YF24   A0A2P8YRY5   A0A2J7QRY0   A0A182IM21   A0A1B6MC53   A0A1J1J3X1   A0A1Y9J0H9   A0A1I8JU62   Q7PSM9   A0A026VSS0   A0A1B0CF69   A0A084VES3   A0A2M4CX37   A0A3L8D3S0   A0A1A9UZ24   A0A195EBC5   A0A0J7NPX2   A0A1B0BEH7   E2CAF8   A0A195F944   A0A1A9WY46   A0A0L7QTC4   A0A195BY08   A0A195CE54   A0A2A3EPD9   A0A151WFQ0   E2AZ11   A0A0M9A745   A0A1I8NI73   A0A1I8NI78   N6UED8   U4UDQ5   A0A310SSP8   A0A1I8PXC0   A0A1W4W399   A0A0A1X0M7   A0A0L0CEI3   A0A0K8VCX1   A0A0K8WLQ9   A0A0K8VNW6   A0A1W4VQK3   A0A1W4VQJ7   A0A1W4VQ97   A0A1W4W1T5   A0A1W4W2N0   A0A1W4VQ90   A0A1W4W394   A0A1W4W1T0   T1HU00   A0A139WFE8   A0A139WFE0   W8AK04   W8B8N0   A0A0N8NZ00   A0A0P8XDQ3   A0A0B4KH61   A0A0P8XEI6   A0A0M4EQG8   B3MTJ6   A0A0R1E965   A0A0R1EAE1   A0A0P9BMD6   A0A0P8Y2T0   Q3KN41   A0A0B4KGQ3   B4PMA4   A0A0B4KGL0   A0A0R1E4A5   A0A0R1E499   A0A0R1E4P0   Q9VCZ9   A0A0R1E473   B4HE98   B3P7H8   A0A0Q9XA33   A0A0Q9X2Z6   A0A0Q9X4S7   B4KC19   A5HBQ4   A0A0Q9X2W7   B9VMQ2   B9VMQ3   A0A158NCS4   F4WZ00   A0A088AL32   A0A0Q9WTV7   B4JSB3   A0A0Q9X3A3   A0A0Q9WSX1   A0A0Q9X1D3   B4NAE7  

PDB

3R05     E-value=1.50312e-10,     Score=153

KEGG

105841323    no KO assigned | (RefSeq) neurexin-2-like

GO

GO:0016021   GO:0015002   GO:0034185   GO:0071938   GO:0031594   GO:0007416   GO:0097109   GO:0008306   GO:2000331   GO:0040012   GO:0007274   GO:0050808   GO:0051124   GO:0007268   GO:1900244   GO:1900073   GO:0098820   GO:0043195   GO:0099056   GO:0042043   GO:0097118   GO:0061174   GO:0048488   GO:0046872   GO:0040011   GO:0072553   GO:0019901   GO:0097105   GO:0005509   GO:0008355  

SignalP

Position:   1 - 25,         Likelihood:  0.953014

 

 

Length:

155

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.30285

Exp number, first 60 AAs:

20.26993

Total prob of N-in:

0.24067

POSSIBLE N-term signal

sequence

outside

1  -  5

TMhelix

6  -  28

inside

29  -  155

 

 

Pi

274.26854

Theta

167.018154

Tajima's D

2.293129

CLR

0.003087

CSRT

0.920253987300635

Interpretation

Uncertain