SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15431
Pre Gene Modal
BGIBMGA004745
Annotation
PREDICTED:_protein_preli-like_[Amyelois_transitella]
Location in the cell
Mitochondrial   Reliability : 2.594
 

Sequence

CDS
ATGACGAGATATTTCGAAAATACTTCGGTCTTTAACTTCAGTTGGGATCAAGTTGCGCGTGGTTACTGGAGGAGATACCCAAATCCGCAGAGTACTCACGTCCTATCTGAAGATACATGGAGCCGACAAGTTCGCGACGGTTGTCTTTATACAAAGCGGCTCCTGACTAAAACCAACAGAGTTCCAAAATGGGGTGAAAGATTTTTCAACTCTAAATCCGTTAAAATAATCGAGGAGAGTGTCGTTGATCCGGAAAAGAAGATTCTCGTAACATACACCAGAAATTTAGGGTACACTAAAGTGATGAGTGTAGTTGAGAGAGTAGAGTACAGGTCAGCCGGTCCGGGCCAGACCGTGGCCAAGCGCTCGGCGTGGATCGACTCGCAGGTTTTCGGCTTCTCGCGAGCCATACGGGCATTCGGTATCGAAAGGTTCAAGAAGAACTGCTCGCAGATGGCGAGCGGGTTCAACCACGTCCTGCACAGCATGTACCCGCGGCCCGCGAGCCCCGCCTCCGGCATGGCCCTGTCTCTGAAGGAGATGCGCGAGGCGGCCGCCGCGGCCACGGACCGCGCCAAGGCCAACGTGCTCTCGTCCGTGCAGAGGACGTAG
Protein
MTRYFENTSVFNFSWDQVARGYWRRYPNPQSTHVLSEDTWSRQVRDGCLYTKRLLTKTNRVPKWGERFFNSKSVKIIEESVVDPEKKILVTYTRNLGYTKVMSVVERVEYRSAGPGQTVAKRSAWIDSQVFGFSRAIRAFGIERFKKNCSQMASGFNHVLHSMYPRPASPASGMALSLKEMREAAAAATDRAKANVLSSVQRT

Summary

EMBL
BABH01028201    RSAL01000001    RVE55303.1    GDQN01003129    GDQN01002345    JAT87925.1    + More
JAT88709.1    AGBW02009250    OWR51263.1    NNAY01000785    OXU26527.1    AAZX01000464    AJWK01002228    GDAI01000382    JAI17221.1    PYGN01001145    PSN37194.1    AJVK01005024    NEVH01013579    PNF28461.1    KK852563    KDR21294.1    ATLV01025855    ATLV01025856    KE525401    KFB52638.1    JXUM01023411    JXUM01023412    JXUM01023413    KQ560661    KXJ81385.1    GAMD01002535    JAA99055.1    GL888818    EGI57931.1    KQ979568    KYN20923.1    KQ780658    OAD51931.1    GL440703    EFN65521.1    ADMH02000135    ETN67645.1    DQ440377    ABF18410.1    ADTU01014868    CH477863    EAT35516.1    KK107373    QOIP01000004    EZA51623.1    RLU23321.1    GBBI01001064    JAC17648.1    GEMB01002659    JAS00533.1    KQ971316    EEZ98761.1    KQ976780    KYN08369.1    GFDL01000486    JAV34559.1    GGFK01010291    MBW43612.1    GGFJ01009242    MBW58383.1    AAAB01008823    EAL41461.2    APCN01001422    GFTR01003583    JAW12843.1    UFQT01000376    SSX23707.1    GL445346    EFN89762.1    JR038745    AEY58390.1    GBGD01002895    JAC85994.1    GFDL01000487    JAV34558.1    GGFM01007930    MBW28681.1    GFDL01000488    JAV34557.1    AXCM01000462    GECL01002844    JAP03280.1    KZ288287    PBC29371.1    JR038746    AEY58391.1    GFDF01003631    JAV10453.1    NEVH01002701    PNF41527.1    KQ982314    KYQ57872.1    AXCN02002378    KQ976662    KYM78590.1    GFDF01003632    JAV10452.1    GL768221    EFZ11712.1    GANO01002021    JAB57850.1    KQ414940    KOC59149.1    GDKW01000768    JAI55827.1    ACPB03013965    GAHY01001392    JAA76118.1    KK854406    PTY15555.1    DS234988    EEB09864.1    LJIG01001664    KRT85276.1    GEZM01017050    GEZM01017049    GEZM01017046    JAV90939.1    CVRI01000065    CRL05698.1    KQ434902    KZC11094.1    APGK01052724    APGK01052725    KB741213    KB631753    ENN72685.1    ERL85808.1    GAMC01011034    GAMC01011033    JAB95521.1    KQ459596    KPI95273.1    GEDC01004834    JAS32464.1    JRES01001654    KNC21119.1    GBXI01011530    JAD02762.1    GBXI01007969    GBXI01002822    GBXI01000412    JAD06323.1    JAD11470.1    JAD13880.1    GBXI01000452    JAD13840.1    LJIJ01000151    ODN01456.1    GFXV01004238    MBW16043.1    GGMR01008723    MBY21342.1    GAKP01004995    GAKP01004994    JAC53957.1    GECZ01019542    JAS50227.1    ABLF02029448    AK340608    BAH71188.1    GDHF01013779    GDHF01008196    GDHF01007063    JAI38535.1    JAI44118.1    JAI45251.1    GECU01016363    GECU01001852    JAS91343.1    JAT05855.1    GEBQ01026854    GEBQ01015638    JAT13123.1    JAT24339.1    GDRN01084801    JAI61438.1   
Pfam
PF04707   PRELI
Interpro
IPR006797   PRELI/MSF1_dom        + More
IPR037365   Slowmo/Ups       
PDB
6I3V     E-value=2.72872e-34,     Score=360

Ontologies

Topology

Length:
203
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00291
Exp number, first 60 AAs:
0.00011
Total prob of N-in:
0.19852
outside
1  -  203
 
 

Population Genetic Test Statistics

Pi
279.117618
Theta
171.540038
Tajima's D
1.706216
CLR
123.183319
CSRT
0.829008549572521
Interpretation
Uncertain
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