SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15429
Pre Gene Modal
BGIBMGA004773
Annotation
hypothetical_protein_RR46_08731_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 1.7 Nuclear   Reliability : 1.982
 

Sequence

CDS
ATGAGCTGGCGCCGAATCTTGTTGGAATACCCAGTGCCTGTTATTGAACATGGTACAAATAGAATTTACTATACAGATAATGTAGGACCATATTATGTTGATGAATACAATCACAAAGTTTATTACTTCAACTATGGATTGGACATGTATCATACTGACTGCGATGGGAAGTTTAAGGAGATTCAGAAGCAAGCCTATTACCACGATTTATCAGGGCGATACACTTTAGAGAATGGAAACAAGATTTATCAATGCGCACCGTGCACGAGCAAATACGTCCTTGATGAAAATGAACTTTTTAAAAAAATAACTCAAGACTGTGGTCATTCGGAGAAGGCGAACGAAAAGTGCAGATTGGATTTTAAGGATACTGTCGAGGAACCCCCGGTACATGAAAATGCCGTCAACATTAAATTACCTCCGGAAGCAGCAGAGTACCTGTGGACGAGCTTCGGAGGTGTTCTACCGGAAGCTCTGCACGCCGTGGCCGTCGAGAAACCAAAAAACCCTATACATTTTCTAGCTCATAAACTACTTCAGTACAAGTACACCGACACTTTAGAAGGGCAGCGTCTTAAGACGAAGCAAGCAAAATCCTATAGAGACGACATTTATAAAAAGCGTAAAGAGCGAGCCGTGCAAGCCAGCACGACTTGGAAATTGAAGCAGGTCCGACGTCGCAAACCCGAAGAATCGGACGACTCACACAACCGGGCCGTTTTTGATGCGCACATTGCTCAAAAGGAATTCATTAATTCTTTGAATTATTACTTCTAA
Protein
MSWRRILLEYPVPVIEHGTNRIYYTDNVGPYYVDEYNHKVYYFNYGLDMYHTDCDGKFKEIQKQAYYHDLSGRYTLENGNKIYQCAPCTSKYVLDENELFKKITQDCGHSEKANEKCRLDFKDTVEEPPVHENAVNIKLPPEAAEYLWTSFGGVLPEALHAVAVEKPKNPIHFLAHKLLQYKYTDTLEGQRLKTKQAKSYRDDIYKKRKERAVQASTTWKLKQVRRRKPEESDDSHNRAVFDAHIAQKEFINSLNYYF

Summary

Pfam
PF05186   Dpy-30
Interpro
IPR007858   Dpy-30_motif        + More
IPR037856   Sdc1/DPY30       

Ontologies

Topology

Length:
258
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0048
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.04704
outside
1  -  258
 
 

Population Genetic Test Statistics

Pi
226.564145
Theta
218.109067
Tajima's D
0.597494
CLR
0.430113
CSRT
0.545222738863057
Interpretation
Uncertain
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