Gene

KWMTBOMO15427

Pre Gene Modal

BGIBMGA004774

Annotation

PREDICTED:_translation_initiation_factor_IF-2?_mitochondrial_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr25(-):12882991-12896059      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.772 Mitochondrial   Reliability : 2.121

CDS

ATGTATAGAAATCTGCTCTTTAACAGGCTTCCGGTAAAATTATTACACAGGGAGTACCAGCTACCAAAAGTCAGCTGTTTTATAAAAGCACTTACAAATAATAATTTGAAAGTTAGACGAATTTCTATATCTGTAGTATGCTGGAAGAAAAGACGATCGGAGGAAGAAAAGGCAGCAGTAAGTCAGGGTAGATCGGCAATCAGATATTCTCCAAAAGCTGGTTCAGAGGTTGTAGGAATTTGGAGGAACATGACAGTACAAGACGTTGCTGATGTGCTAAAAAAGGATATTGACCATGTTTTTAAAGTGCTAAATTTTGCTGACAAAACTGGAATGACATACACAAAGGATACAGTCATACACAATCCACAGGTGGTCAGGGACATTGTCAAAATATCAGGATGCAGATTTAAGTTGGTAGCAAGACCTGATGCTGAAATGAAAGATGAGGAGAACAAAGACGCAGTCCCGGCGCCTCCTGCGGCCGAGGAGGCGCTTCGGCCTCGACCTCCCGTGGTGTGTGTGATGGGGCATGTGGACCACGGAAAAACTACTCTACTAGATGCTCTCAGGGACACAGCGGTAGTGGAAACAGAGTTTGGGGGTATCACTCAGCATATTGGAGCTTTTGAGGTGAAACTGCCCAGTGGTGGGAAGGTGACATTCCTGGACACTCCCGGACACGCGGCCTTCACGTCCATGAGGAGTCGCGGCGCGCACTCCACCGACATCGTGGTGCTGGTCGTCGCCGCTGACGATGGTGTCATGGAACAAACACTCGAGTCCATTCGAATGGCGAGAGAAGCTAATGTTCCTATATTGGTGGCCATCAACAAAATCGACAAACCAGGTGTGAACGTTGAGCGCGTGTTGCGCGGGCTGGCCCAGCACGGCGTGGTGTGCGAGCAGGCGGGCGGCGAGGTGCAGGCCGTGCCCGTGTCGGCGCTGCGCCGCCGGAACCTCGACGCGCTGCTCGAGGCCCTCACCCTGCAGGCGCAGCTCATGCAGCTCCGCGCCGACCCCGCCGGACAGGTCGAGGGCGTCGTCATTGAAGCACTGGTGGACCCTAGGACCGGCAAGCAGGCGACGGTGCTGGTGCGGCGCGGGACGCTGCGGCGCGGCTGCACGCTGGTGGCGGGCGCGGGCTGGGCCAAGGTTCGCATTTTGAGGTCGGCGGAGGGTGCGTCCATAGAGGAGGCGCCCCCCTCCTGCCCCGTGGTGGTGCTCGGCTGGAGAGAGTTGCCCGCCGCCGGGGACCTGGTGCTCGAGGTCGCCTCTGAGAAGCGCGCGGCGGAGGTGATGCGGTGGCGCGCGGCGCAGCGCATGAAGGAGAAGCAGCAGTCCGACTCGGAAGTTATCGAAGCCAAGATGTCGGAGCACCAGCAGCGGTACCGGGCCATGCTGTCCCGGAAGCGGGCGATGGGCCGCTACAAACTGAAGCCGGAAGGTCCGCGGGAGAAAATGATCAAGGAGGACACGCATCCCGCGCTCAACGTCATCGTCAAAGGCGACGTGGATGGTTCAGTGGAGGCCATCCTGGACATCCTGGACACGTACGACGACCACGAGCGGGTCCGACTCGATCTCGTGCACTTTGGCGTGGGACAGGTCACGCCCAACGACCTGGAGATAGCGGAAGCCTTCAACGCTATAATATACGCGTTCAACGTGGAGTGCCCGCCTGCGGTCGCGGCGGACGCCAAGGACCTCAACATCTCCGTGAGGAAACACAACGTCATATACCGGCTGGTGGACGACGTCAAGCAGGAGATCACCGCCAGGATACCGGTCACGCAGACCGAGGAAGTCATCGGCGAAGCCAACGTGCTGCAGGAGTTCATGGTGTCGGAGGGCAGGAGGAAGGTGCCGGTGGCGGGCTGCCGCTGCGTGCGAGGCTCGCTGGCCAAGAACGCGCTCTACAAGATCATCAGGGGACAGGAAACCGTCTTCGAAGGTAAACTGGTCTCGATGAAGCACCTGAAGGAGGAGGTGCCGACGATAAAGCGCGACCAGGAGTGCGGCCTGAAGTTCGACGACCCCGAGGCGCGCGTGCAGCCCGGCGACACCGTGCTGTGCTACCGCCTGCGGGACGTCGCGCCGCGCACCGACTGGGACCCCGGCTTCTAG

Protein

MYRNLLFNRLPVKLLHREYQLPKVSCFIKALTNNNLKVRRISISVVCWKKRRSEEEKAAVSQGRSAIRYSPKAGSEVVGIWRNMTVQDVADVLKKDIDHVFKVLNFADKTGMTYTKDTVIHNPQVVRDIVKISGCRFKLVARPDAEMKDEENKDAVPAPPAAEEALRPRPPVVCVMGHVDHGKTTLLDALRDTAVVETEFGGITQHIGAFEVKLPSGGKVTFLDTPGHAAFTSMRSRGAHSTDIVVLVVAADDGVMEQTLESIRMAREANVPILVAINKIDKPGVNVERVLRGLAQHGVVCEQAGGEVQAVPVSALRRRNLDALLEALTLQAQLMQLRADPAGQVEGVVIEALVDPRTGKQATVLVRRGTLRRGCTLVAGAGWAKVRILRSAEGASIEEAPPSCPVVVLGWRELPAAGDLVLEVASEKRAAEVMRWRAAQRMKEKQQSDSEVIEAKMSEHQQRYRAMLSRKRAMGRYKLKPEGPREKMIKEDTHPALNVIVKGDVDGSVEAILDILDTYDDHERVRLDLVHFGVGQVTPNDLEIAEAFNAIIYAFNVECPPAVAADAKDLNISVRKHNVIYRLVDDVKQEITARIPVTQTEEVIGEANVLQEFMVSEGRRKVPVAGCRCVRGSLAKNALYKIIRGQETVFEGKLVSMKHLKEEVPTIKRDQECGLKFDDPEARVQPGDTVLCYRLRDVAPRTDWDPGF

Uniprot

H9J5I4   A0A2A4JYC4   A0A194PVW3   A0A194RIP9   A0A2H1V9T8   A0A212FBY8   + More
A0A3S2LJL8   A0A067RTM6   A0A2J7RPR8   A0A1B6EDF4   A0A0A9WIR4   D6WQE9   A0A2R7WB56   A0A0P6BZI4   A0A0P5NZV9   A0A164PVX7   A0A0P6IVZ5   A0A0P5P6S6   A0A131XE58   A0A224ZA04   G3MKY6   A0A0P4W2N6   A0A131YWF1   E9H0D1   T1HV46   L7LUV5   A0A0N8B015   A0A023F1Z1   A0A0V0G8W4   K7J222   V5IG97   E2A3Z7   A0A232EH32   A0A182QTB3   A0A182MQ52   A0A3L8DR39   A0A182VZH2   A0A026WBJ9   A0A151X0H0   A0A182J657   A0A084WBR2   A0A0M4ELH8   A0A182NRZ3   A0A1Q3F4Y9   B4IH13   A0A0P5MLH1   A0A182FQD2   A0A182PGI6   B3P5S5   W5JIN4   Q9VAV2   A0A1I8N1A4   A0A151JS15   Q8MS23   A0A0C9RE90   B4K6Z7   E2BK40   B3LV81   B0W482   A0A0A1XTD1   A0A182RZ88   A0A1W4UG05   A0A195C3V8   A0A1I8P923   A0A1W4XKQ0   F4W750   A0A1D1W5Y5   A0A1A9YHZ6   U4UJ27   A0A195EYK8   N6TJT9   A0A182HCL2   B4QYR6   A0A182KFB4   A0A1S4F479   Q17G92   B4PQS3   B4MC51   A0A0J7KZZ9   B4JGP8   A0A336MIR5   A0A0K8VDJ2   A0A0P5G3A9   A0A0P5CIB8   A0A0P5UMV4   A0A1A9ZFP7   A0A0P5CXN3   A0A0Q9XC67   A0A1A9X2L9   A0A1A9UNN4   A0A182VAG0   A0A182WSM9   A0A3B0JHV5   A0A2H8TZA3   A0A0P8YG93   A0A182TMZ6   A0A182HLI0   Q7PKU6   B4N8N7  

Pubmed

19121390    26354079    22118469    24845553    25401762    18362917    + More
19820115    28049606    28797301    22216098    26830274    21292972    25576852    25474469    20075255    25765539    20798317    28648823    30249741    24508170    24438588    17994087    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25315136    25830018    21719571    27649274    23537049    26483478    17510324    17550304    12364791    14747013    17210077   

EMBL

BABH01028205    NWSH01000383    PCG76809.1    KQ459596    KPI95270.1    KQ460118    + More
KPJ17703.1    ODYU01001231    SOQ37162.1    AGBW02009250    OWR51259.1    RSAL01000001    RVE55305.1    KK852425    KDR24160.1    NEVH01001355    PNF42826.1    GEDC01001335    JAS35963.1    GBHO01038859    GBRD01001158    JAG04745.1    JAG64663.1    KQ971354    EFA07686.2    KK854565    PTY16922.1    GDIP01008125    JAM95590.1    GDIQ01142265    JAL09461.1    LRGB01002544    KZS07191.1    GDIQ01016895    JAN77842.1    GDIQ01133023    JAL18703.1    GEFH01003058    JAP65523.1    GFPF01012747    MAA23893.1    JO842537    AEO34154.1    GDRN01096834    JAI59267.1    GEDV01005675    JAP82882.1    GL732580    EFX74841.1    ACPB03003906    GACK01010420    JAA54614.1    GDIQ01226139    JAK25586.1    GBBI01003135    JAC15577.1    GECL01001529    JAP04595.1    GANP01007067    JAB77401.1    GL436519    EFN71849.1    NNAY01004622    OXU17644.1    AXCN02000256    AXCM01005462    AXCM01005463    AXCM01005464    QOIP01000005    RLU22905.1    KK107293    EZA53462.1    KQ982612    KYQ53846.1    ATLV01022425    KE525332    KFB47656.1    CP012526    ALC46152.1    GFDL01012414    JAV22631.1    CH480837    EDW49131.1    GDIQ01157664    JAK94061.1    CH954182    EDV53325.1    ADMH02001287    ETN63153.1    AE014297    BT150258    AAF56796.2    AGV77160.1    KQ978579    KYN30025.1    AY119138    AAM50998.1    GBYB01014903    GBYB01014904    JAG84670.1    JAG84671.1    CH933806    EDW15284.2    GL448740    EFN83948.1    CH902617    EDV43613.2    DS231835    EDS32926.1    GBXI01000052    JAD14240.1    KQ978317    KYM95295.1    GL887813    EGI69934.1    BDGG01000015    GAV07598.1    KB632326    ERL92423.1    KQ981920    KYN32992.1    APGK01035004    APGK01035005    KB740923    ENN78138.1    JXUM01033558    KQ560993    KXJ80094.1    CM000364    EDX14735.1    CH477265    EAT45556.1    CM000160    EDW98412.1    CH940656    EDW58672.1    LBMM01001641    KMQ95956.1    CH916369    EDV92652.1    UFQS01001179    UFQT01001179    SSX09535.1    SSX29351.1    GDHF01015699    JAI36615.1    GDIQ01247944    JAK03781.1    GDIP01169720    JAJ53682.1    GDIP01114433    JAL89281.1    GDIP01163979    JAJ59423.1    KRG01496.1    OUUW01000005    SPP80293.1    GFXV01007434    MBW19239.1    KPU80384.1    APCN01000904    AAAB01008987    EAA43132.4    CH964232    EDW81488.2   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000283053    + More
UP000027135    UP000235965    UP000007266    UP000076858    UP000000305    UP000015103    UP000002358    UP000000311    UP000215335    UP000075886    UP000075883    UP000279307    UP000075920    UP000053097    UP000075809    UP000075880    UP000030765    UP000092553    UP000075884    UP000001292    UP000069272    UP000075885    UP000008711    UP000000673    UP000000803    UP000095301    UP000078492    UP000009192    UP000008237    UP000007801    UP000002320    UP000075900    UP000192221    UP000078542    UP000095300    UP000192223    UP000007755    UP000186922    UP000092443    UP000030742    UP000078541    UP000019118    UP000069940    UP000249989    UP000000304    UP000075881    UP000008820    UP000002282    UP000008792    UP000036403    UP000001070    UP000092445    UP000091820    UP000078200    UP000075903    UP000076407    UP000268350    UP000075902    UP000075840    UP000007062    UP000007798   

PRIDE

H9J5I4    G3MKY6    Q9VAV2    Q8MS23   

Pfam

PF00009   GTP_EFTU        + More
PF11987   IF-2

Interpro

IPR027417   P-loop_NTPase        + More
IPR036925   TIF_IF2_dom3_sf       
IPR015760   TIF_IF2       
IPR009000   Transl_B-barrel_sf       
IPR005225   Small_GTP-bd_dom       
IPR000795   TF_GTP-bd_dom       
IPR023115   TIF_IF2_dom3       
IPR000178   TF_IF2_bacterial-like       

SUPFAM

SSF52156   SSF52156        + More
SSF52540   SSF52540       
SSF50447   SSF50447       

Gene 3D

3.40.50.10050    

ProteinModelPortal

H9J5I4   A0A2A4JYC4   A0A194PVW3   A0A194RIP9   A0A2H1V9T8   A0A212FBY8   + More
A0A3S2LJL8   A0A067RTM6   A0A2J7RPR8   A0A1B6EDF4   A0A0A9WIR4   D6WQE9   A0A2R7WB56   A0A0P6BZI4   A0A0P5NZV9   A0A164PVX7   A0A0P6IVZ5   A0A0P5P6S6   A0A131XE58   A0A224ZA04   G3MKY6   A0A0P4W2N6   A0A131YWF1   E9H0D1   T1HV46   L7LUV5   A0A0N8B015   A0A023F1Z1   A0A0V0G8W4   K7J222   V5IG97   E2A3Z7   A0A232EH32   A0A182QTB3   A0A182MQ52   A0A3L8DR39   A0A182VZH2   A0A026WBJ9   A0A151X0H0   A0A182J657   A0A084WBR2   A0A0M4ELH8   A0A182NRZ3   A0A1Q3F4Y9   B4IH13   A0A0P5MLH1   A0A182FQD2   A0A182PGI6   B3P5S5   W5JIN4   Q9VAV2   A0A1I8N1A4   A0A151JS15   Q8MS23   A0A0C9RE90   B4K6Z7   E2BK40   B3LV81   B0W482   A0A0A1XTD1   A0A182RZ88   A0A1W4UG05   A0A195C3V8   A0A1I8P923   A0A1W4XKQ0   F4W750   A0A1D1W5Y5   A0A1A9YHZ6   U4UJ27   A0A195EYK8   N6TJT9   A0A182HCL2   B4QYR6   A0A182KFB4   A0A1S4F479   Q17G92   B4PQS3   B4MC51   A0A0J7KZZ9   B4JGP8   A0A336MIR5   A0A0K8VDJ2   A0A0P5G3A9   A0A0P5CIB8   A0A0P5UMV4   A0A1A9ZFP7   A0A0P5CXN3   A0A0Q9XC67   A0A1A9X2L9   A0A1A9UNN4   A0A182VAG0   A0A182WSM9   A0A3B0JHV5   A0A2H8TZA3   A0A0P8YG93   A0A182TMZ6   A0A182HLI0   Q7PKU6   B4N8N7  

PDB

6GB2     E-value=7.81559e-152,     Score=1380

KEGG

101740720    K02519 translation initiation factor IF-2 | (RefSeq) translation initiation factor IF-2, mitochondri

GO

GO:0005525   GO:0003924   GO:0003743   GO:0005739   GO:0070124   GO:0000049   GO:0032543   GO:0006413   GO:0046872   GO:0005634   GO:0008270   GO:0043565   GO:0003677   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR43381  

Length:

708

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00038

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00013

outside

1  -  708

 

 

Pi

184.078075

Theta

153.601008

Tajima's D

0.395085

CLR

0.08346

CSRT

0.479426028698565

Interpretation

Uncertain