Gene

KWMTBOMO15420

Annotation

reverse_transcriptase_[Danaus_plexippus]

Location

Bomo_Chr25(-):12809191-12811779      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.398 PlasmaMembrane   Reliability : 1.098

CDS

ATGGAAGCCTCTACGGTGGCGGCGTGGACGCCCATGCGTCCATATCCGGTTGAGGTCGAGCGCGAAGCGGGGTGGTTCCGGGACACGATGCGACGCATCTGCGACGTATCGATGCCCCGGATCAGCCCTCGGCCTCCCAATCGCCAGGTGTACTGGTGGTCGCCCGAAATCGCGCAACTCCGCGTGGAGTGCGTTCGGGCGAGGCGCGAGTGCGCCAGGCACCGCCGCCGTCGCTTGCCGCGGCGCAACGATCCGGTTGCGTTCGCGGTGGTGGAGGCCCGGCTGTACGGCACATTTCGCGTCGCGCAGAGGGCTTTGCAGCTGGCCATCATAAGAGCCAAGAACCAACACATGGAGGGTCTCTTGGAGACGCTGGATGAGGATCCGTGGGGGCGACCCTATCATATGGTGCGCAATAAAATGCGCCCATGGGCCCCCCCAATCACGGAGCGTCTCCAGCCTCAGCAGTTGCGGGACATCGTCTCGGCGCTGTTCCCGCAGGAGCGGGAGGGATTTATCGCTCCCGCTATGGACGTCCCGTCGGAAAACGGCGGCGACGCCTCTGCTGAGGTGCCCCATATAACGGGGGCGGAGCTCCATGTGGCCATGCGTAAAATGTGCGCGAAGGACACTGCGCCCGGTCCGGACGGCGTCCATGGCCGGGTTTGGGCCTTGGCTCTTGGTGCCCTGGGGGACCGACTCTTGAGGCTTTACAACTCCTGCCTCGAGTCGGGACGGTTTCCTTCATCGTGGAGGACGGGCAGACTCGTGCTGTTGAGAAAGGAGGGGCGCCCGGCGGATACTGCCGCCGGGTACCGTCCCATCGTGTTGCTGGATGAGGTGGGCAAGCTGCTGGAACGCATTCTGGCGGTCCGCATCATTCAGCATCTGGTCGGGGTGGGACCCGATCTGTCGGCGGAGCAGTATGGCTTTCGAGAGGGCCGCTCAACGGTGGACGCGATCCTTCGCGTACGGGCTCTCTCGGAAGAAGCCGTCTCCAGGGGTGGGGTGGCCTTGGCGGTGTCGCTCGACATCGCCAATGCGTTTAACACCCTGCCCTGGTCCGTGATAGGGGGGGCACTGGAAAGACACGGAGTGCCTCTCTACCTTCGCCGACTGGTGGGTTCCTACTTGGAGGACAGATCGGTCACGTGTACCGGACACGGTGGGATCGTGCACAGGTTCCCGGTCGTGCGCGGTGTTCCACAGGGGTCGGTGCTCGGCCCCCTTTTGTGGAATATCGGGTATGACTGGGTACTGAGGGGTGCCCTCCTCCCGGGCCTAAGCGTAATCTGTTACGCAGACGACACGCTGGTCGTGGCCCGGGGGGGGAGTTTTGCTGAGTCTGCTCGTCTTGCCACCGCTGGGGTGGCGCATGTCGTCGGCAAAATCAGGAGATTGGGCCTCGACGTGGCGCTCAGTAAATCCGAGGCCATGTGGTTCCACAGGCCCCGGAGAGTGCCACCTGTCGATGCCCATATCATGGTTGGAGGCGTCCGTATCGAGGTCGGGGTGCAGTTGAAGTACCTCGGCCTCATTCTGGACAGTCGTTGGACCTTCCGTGCTCACTTTCAGAACCTGGTCCCTCGTTTGTTGGGGGTGGCTGGTGCGTTAAGCCGGCTTCTGCCCAACGTGGGGGGGCCTGACCAGGTGACGCGCCGTCTCTATACGGGGGTGGTGCGATCAATGGCCCTATACGGGGCGCCCGTGTGGGGCCAGTCCCTGGCCGTGGGGGTAGCGAAGCTGCTGCAACGGCCGCAACGCACCATCGCGGTCAGGGTCATCCGTGGCTATCGCACCATCTCCTTCGAGGCAGTGTGTGTACTGGCTGGGACGCCGCCTTGGGTCCTGGAGGCGGAGGCGCTCGCCGCTGACTATCAGTGGCGGGCTGACCTTCGTGCCCGGGGCGTGGCACGTCTCAGCCCCAGTGTGGTCAGAGCGCGGAGGGCCCAATCTCGGCGGTCCGTGCTGGAGTCATGGTCCAGACGGCTGGTCGATCCTTCGGCTGGTCGTAGGACCGTCGAGGCGATTCGCCCGGTTCTTGTGAATTGGGTAAATCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTGCTCACTGGGAATGGTTGCTTCGGTGAGTTCCTGCACCGGATCGGAGCCGAGCCGACGGCAGAGTGCCACCATTGTGGTTGCGACTTGGACACGGCGGAGCACACGCTCGTTGCCTGCCCCGCATGGGAGGGGTGGCGCCGTGTCCTCGTCGCAAAAATAGGAAACGACTTGTCGTTGCCGAGTGTTGTGGCATCGATGCTCGGCGACGACGAGTCGTGGAAGGCGATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGCGTGAGAGACGCACAGGCCCGCCGCCGTCGAGCGGGGGCCAGGGAGGCGGATCTCGCCCAAGCCCTGGCCCTCTAA

Protein

MEASTVAAWTPMRPYPVEVEREAGWFRDTMRRICDVSMPRISPRPPNRQVYWWSPEIAQLRVECVRARRECARHRRRRLPRRNDPVAFAVVEARLYGTFRVAQRALQLAIIRAKNQHMEGLLETLDEDPWGRPYHMVRNKMRPWAPPITERLQPQQLRDIVSALFPQEREGFIAPAMDVPSENGGDASAEVPHITGAELHVAMRKMCAKDTAPGPDGVHGRVWALALGALGDRLLRLYNSCLESGRFPSSWRTGRLVLLRKEGRPADTAAGYRPIVLLDEVGKLLERILAVRIIQHLVGVGPDLSAEQYGFREGRSTVDAILRVRALSEEAVSRGGVALAVSLDIANAFNTLPWSVIGGALERHGVPLYLRRLVGSYLEDRSVTCTGHGGIVHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLSVICYADDTLVVARGGSFAESARLATAGVAHVVGKIRRLGLDVALSKSEAMWFHRPRRVPPVDAHIMVGGVRIEVGVQLKYLGLILDSRWTFRAHFQNLVPRLLGVAGALSRLLPNVGGPDQVTRRLYTGVVRSMALYGAPVWGQSLAVGVAKLLQRPQRTIAVRVIRGYRTISFEAVCVLAGTPPWVLEAEALAADYQWRADLRARGVARLSPSVVRARRAQSRRSVLESWSRRLVDPSAGRRTVEAIRPVLVNWVNRDRGRLTFRLTQVLTGNGCFGEFLHRIGAEPTAECHHCGCDLDTAEHTLVACPAWEGWRRVLVAKIGNDLSLPSVVASMLGDDESWKAMLDFCECTISQKEAAGRVRDAQARRRRAGAREADLAQALAL

Uniprot

Q868Q4   Q8MY27   Q8MY31   Q8MY35   Q8MY33   A0A2W1C3J5   + More
A0A0J7N1D9   O01419   Q8MY25   A0A0J7KJG6   A0A0J7KIY5   A0A0J7KQK3   A0A0J7KIM6   A0A0J7KJH4   A0A0J7KLH8   A0A0J7KYD2   A0A0J7NAV8   A0A0J7KWU5   A0A0J7KF37   A0A0J7KRB8   A0A0J7K3F1   A0A0J7K366   A0A0J7KLT9   A0A0J7KPR0   A0A0J7K3R6   A0A0J7KPZ3   A0A0J7KF40   A0A0J7N0R3   A0A0J7KFH2   A0A3S2LNH8   J9LJ80   A0A0J7MY17   A0A2S2N8I2   X1WJY4   A0A0J7NFZ0   A0A2S2PEZ7   A0A2S2PBP5   A0A2H8TIE5   A0A0J7KQY4   J9LVU7   A0A0J7MWN5   A0A0J7NJI3   A0A0J7KMG5   A0A0J7KMU1   A0A2S2NJ82   A0A2S2NQQ6   J9KJG8   J9KUM6   A0A0J7KW81   A0A0J7MYL9   A0A2H8TR36   J9JWJ3   A0A0J7KF91   A0A2S2P488   W8ADE4   W8ANK7   A0A0J7N8R4   J9KT70   A0A142LX45   A0A023EW96   J9KNS1   A0A2S2PEU2   J9KNN8   A0A2M4BC28   A0A1W7R6I9   X1WXT5   J9JY94   A0A2M4BDI3   J9KV04   A0A2M4CKQ7   A0A2S2PRL8   A0A2M4BBV9   A0A2M4ADW9   A0A2M4BC01   A0A0J7KIS5   A0A2M4CS98   F7IYV5   J9L6Z9   X1WZ64   A0A034WR48   D6WC19   A0A1W7R6C5   T1DCM0   J9KM84  

Pubmed

12644555    28756777    9092665    24495485    25527032    24945155    + More
25348373    18362917    19820115    24330624   

EMBL

AB090825    BAC57926.1    AB078935    BAC06462.1    AB078931    BAC06456.1    + More
AB078929    BAC06452.1    AB078930    BAC06454.1    KZ149896    PZC78733.1    LBMM01012027    KMQ86470.1    D85594    BAA19776.1    AB078936    BAC06464.1    LBMM01006671    KMQ90407.1    LBMM01006954    KMQ90166.1    LBMM01004272    KMQ92618.1    LBMM01007036    KMQ90099.1    LBMM01006657    KMQ90417.1    LBMM01005948    KMQ91066.1    LBMM01002052    KMQ95336.1    LBMM01007425    KMQ89740.1    LBMM01002480    KMQ94776.1    LBMM01008448    KMQ88867.1    LBMM01003988    KMQ92922.1    LBMM01015025    KMQ84953.1    LBMM01015565    KMQ84759.1    LBMM01005733    KMQ91252.1    LBMM01004634    KMQ92224.1    LBMM01015018    KMQ84954.1    LBMM01004505    KMQ92346.1    LBMM01008422    KMQ88894.1    LBMM01012412    KMQ86235.1    LBMM01008278    KMQ89009.1    RSAL01003504    RVE40273.1    ABLF02015311    ABLF02015320    ABLF02034009    ABLF02043484    LBMM01014122    KMQ85315.1    GGMR01000779    MBY13398.1    ABLF02011238    LBMM01005474    KMQ91485.1    GGMR01015159    MBY27778.1    GGMR01014195    MBY26814.1    GFXV01002090    MBW13895.1    LBMM01004262    KMQ92649.1    ABLF02034925    LBMM01015285    KMQ84870.1    LBMM01004261    KMQ92650.1    LBMM01005465    KMQ91492.1    LBMM01005216    KMQ91703.1    GGMR01004600    MBY17219.1    GGMR01006838    MBY19457.1    ABLF02041886    ABLF02041557    KMQ94772.1    LBMM01013668    KMQ85535.1    GFXV01003903    MBW15708.1    ABLF02013358    ABLF02013361    ABLF02054869    LBMM01008445    KMQ88871.1    GGMR01011682    MBY24301.1    GAMC01020519    GAMC01020515    JAB86040.1    GAMC01020517    JAB86038.1    LBMM01008226    KMQ89040.1    ABLF02010223    KU543683    AMS38371.1    GAPW01000192    JAC13406.1    ABLF02018808    GGMR01015354    MBY27973.1    ABLF02023257    GGFJ01001439    MBW50580.1    GEHC01000915    JAV46730.1    ABLF02004854    ABLF02041317    ABLF02007989    GGFJ01001727    MBW50868.1    ABLF02004674    ABLF02004675    ABLF02004676    ABLF02011637    GGFL01001583    MBW65761.1    GGMR01019493    MBY32112.1    GGFJ01001369    MBW50510.1    GGFK01005660    MBW38981.1    GGFJ01001370    MBW50511.1    LBMM01006977    KMQ90149.1    GGFL01004044    MBW68222.1    AB593325    BAK38646.1    ABLF02021100    ABLF02011183    ABLF02041884    GAKP01002292    JAC56660.1    KQ971309    EEZ99146.1    GEHC01000964    JAV46681.1    GALA01001777    JAA93075.1    ABLF02018942    ABLF02041885   

Proteomes

UP000036403    UP000283053    UP000007819    UP000007266   

PRIDE

Q868Q4    O01419   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF01553   Acyltransferase
PF03372   Exo_endo_phos
PF01421   Reprolysin
PF00098   zf-CCHC

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR024079   MetalloPept_cat_dom_sf       
IPR001590   Peptidase_M12B       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       

Gene 3D

3.60.10.10     3.40.390.10    

ProteinModelPortal

Q868Q4   Q8MY27   Q8MY31   Q8MY35   Q8MY33   A0A2W1C3J5   + More
A0A0J7N1D9   O01419   Q8MY25   A0A0J7KJG6   A0A0J7KIY5   A0A0J7KQK3   A0A0J7KIM6   A0A0J7KJH4   A0A0J7KLH8   A0A0J7KYD2   A0A0J7NAV8   A0A0J7KWU5   A0A0J7KF37   A0A0J7KRB8   A0A0J7K3F1   A0A0J7K366   A0A0J7KLT9   A0A0J7KPR0   A0A0J7K3R6   A0A0J7KPZ3   A0A0J7KF40   A0A0J7N0R3   A0A0J7KFH2   A0A3S2LNH8   J9LJ80   A0A0J7MY17   A0A2S2N8I2   X1WJY4   A0A0J7NFZ0   A0A2S2PEZ7   A0A2S2PBP5   A0A2H8TIE5   A0A0J7KQY4   J9LVU7   A0A0J7MWN5   A0A0J7NJI3   A0A0J7KMG5   A0A0J7KMU1   A0A2S2NJ82   A0A2S2NQQ6   J9KJG8   J9KUM6   A0A0J7KW81   A0A0J7MYL9   A0A2H8TR36   J9JWJ3   A0A0J7KF91   A0A2S2P488   W8ADE4   W8ANK7   A0A0J7N8R4   J9KT70   A0A142LX45   A0A023EW96   J9KNS1   A0A2S2PEU2   J9KNN8   A0A2M4BC28   A0A1W7R6I9   X1WXT5   J9JY94   A0A2M4BDI3   J9KV04   A0A2M4CKQ7   A0A2S2PRL8   A0A2M4BBV9   A0A2M4ADW9   A0A2M4BC01   A0A0J7KIS5   A0A2M4CS98   F7IYV5   J9L6Z9   X1WZ64   A0A034WR48   D6WC19   A0A1W7R6C5   T1DCM0   J9KM84  

PDB

6AR3     E-value=8.14409e-05,     Score=113

KEGG

101737183    no KO assigned | (RefSeq) uncharacterized LOC101737183

GO

GO:0003964   GO:0016746   GO:0016021   GO:0008270   GO:0003676  

Length:

815

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15175

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00221

outside

1  -  815

 

 

Pi

10.832262

Theta

13.177571

Tajima's D

-1.066339

CLR

0.321201

CSRT

0.12264386780661

Interpretation

Uncertain