Silkworm Genome Informatics Database

Gene

KWMTBOMO15416

Pre Gene Modal

BGIBMGA006113

Annotation

PREDICTED:_uncharacterized_protein_LOC106713976_[Papilio_machaon]

Location

Bomo_Chr25(-):12311213-12323606 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.488

CDS

ATGCCTGAAGGCAAAGTAAAAGACTTAATTAAAAGGAGGGCCTCAATAAAGGCCAAAATAACACAATTCTCTACGTATTTGGATGTCCTACGGGGTTGTGATTATTTCAATGATGTGCAATTCTCGGAACTCCAAGTACGTCTTGAGAAATTCGAAACCTTATACGGGGACTTCGACAGTTTTCAGAGTGAGATCGAGATGCTGTCAGACGCGCCGGAAGACCATTATAAGGATCGTGAGTCCATTGAGTCGCAGTACTACAAGCTTGTGGCTTCTGCGCGTACGCTGTTGGATCAACGCAAAAATAATGACGGTAGGTCCGAGGAACACTTCCTGTACGCGTGCGAGTCTTTTAGAAGTTTGTCGATTGAAACACGTATTAGGAAAGCAAAGGAGCTTAGAGTGTGCCTTAACTGTCTGAGGCCTGGACACACTGATTCTCAATATCTTACTAAATTTTGGGAGCTAGACTCTATACCATCTTCAACAATCAACGATTTAAATAGTCATCCGTGTGAAAAGGTGTTCATTGAAACTACAACGCGCGCTGAAGACGGACGCTTTAACGTGACCTTACCTTTCCATGAATCACCAAAATGTTTAGGAGACTCGTACTATATGGCCAAGCACCGTCGTACCCTTCCTTCCGATTTGGCAGAGCAAGAGATTAAATTTTCTTTTATACCGGCATACACACCACATTTTGGCGGACTTTGGGAGTCAGCCGTTAGGTCTACGAAATATCACTTGCGTAGAACTTTAGGGCTAACACATCTCACATTTGAAGAAATGACGACTTTATTAACTCAAATTGAAGCCATTTTAAATTCAAGGCCTCTCATTCCTCTGTCAGATGATCCTTCGGACTATTATCCTCTCACTCCAGCTCATTTCCTAATAGGACGATCTTTACTCTTTGTACCTCAGCCTGATTTAACAAATCATTCAACTTTAACCTCTCTTAAGAGATTCCAGCGTATCGAGTACCTTAAGCAGCATTTTTGGCAGCGATTCTCCAATGAGTACGTCGTGTGGCTACAACAAAAAATGAAATGGCCGACTCAAAAGGGAGACTTAAAAGAAGGTATGATGGTTGTCATCAAGGAGAAGGGACTACCACCTCTTATGTGGCTGCTCGGACGCATTATTCGTCTTTGTCCTGGACGAGATGGAATTACACGTGTGGCAGATATCTTAACCAAGAAAGGTGTTATACGACGCGCTTACAACAACATATGCCCGCTACCAGTCAATATTTGA

Protein

MPEGKVKDLIKRRASIKAKITQFSTYLDVLRGCDYFNDVQFSELQVRLEKFETLYGDFDSFQSEIEMLSDAPEDHYKDRESIESQYYKLVASARTLLDQRKNNDGRSEEHFLYACESFRSLSIETRIRKAKELRVCLNCLRPGHTDSQYLTKFWELDSIPSSTINDLNSHPCEKVFIETTTRAEDGRFNVTLPFHESPKCLGDSYYMAKHRRTLPSDLAEQEIKFSFIPAYTPHFGGLWESAVRSTKYHLRRTLGLTHLTFEEMTTLLTQIEAILNSRPLIPLSDDPSDYYPLTPAHFLIGRSLLFVPQPDLTNHSTLTSLKRFQRIEYLKQHFWQRFSNEYVVWLQQKMKWPTQKGDLKEGMMVVIKEKGLPPLMWLLGRIIRLCPGRDGITRVADILTKKGVIRRAYNNICPLPVNI

Uniprot

X1X9I2

EMBL

ABLF02042264

Proteomes

UP000007819

Pfam

PF03564 DUF1759 + More
PF18701 DUF5641

Interpro

IPR012337   RNaseH-like_sf        + More
IPR005312   DUF1759
IPR036397   RNaseH_sf
IPR040676   DUF5641

SUPFAM

SSF53098 SSF53098

Gene 3D

3.30.420.10

ProteinModelPortal

X1X9I2

KEGG

105842570 no KO assigned | (RefSeq) uncharacterized LOC105842570

GO

GO:0003676 GO:0043401 GO:0003700 GO:0005634 GO:0008270 GO:0043565 GO:0003677 GO:0003707 GO:0006281 GO:0006259

Length:

419

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00394

Exp number, first 60 AAs:

0.00027

Total prob of N-in:

0.00344

outside

1 - 419

Pi

257.594342

Theta

181.709778

Tajima's D

1.223049

CLR

0.393889

CSRT

0.722913854307285

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree