SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15404  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004894
Annotation
PREDICTED:_protein_anoxia_up-regulated-like_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.367
 

Sequence

CDS
ATGGTATACGAGAGTGACTTCTACACGACGCGTCGGCCCTACAGGTCCACCTACAGCGTGACGCGGTCGACGCTCGGGGACTGGGAGAAGGTGCCGTTCGTGCCGCGGCCGAGTCTCGTGCCCGACCCGGTGACGGCCTTCGGGCGGCGCACCAAGCCGGGCACGCGCGCCTCCGTGCTGGACCCCGTCACCAAACAAAACATCCCGCCGAAACCGGAGTCGAAGTTGGCGCCTCTCGCGCCTTACGTATCTCCGCGCGAACAAACGCGCGCGCGTGTGCTTTCTACCGTTGGACAGCGGGAGCGCGCGTTCGAGGCGGACCCTCTGGGCACGCCGCGCGACCACATGGACGTGCTGCTCGCCCAGGCGCACGGCCGCCCGCTGCACGCGGCGCATCGTCACACGCCGCGGCACTACGTGGTGGTGGACCGCGACCCGATCGCGCCACGTCGTGCCGAGGAGCAGTACTCGTACTCGTACTCGAGCACAAGCCAGCGCTCGGCGGGCAGCGGCCTGCCTCAGCGCAGCTCGTACAGCAACACGGTGGAGCGCCGCACCGGCAGCGGCCCCGGGGGCTACTCCTACACCAGCGAACGCTCCAGCAACCTCGGCGGTCCCGGAGGCTACTCCTACTCGTCCACCAGCAGCGGCCGCCTGCCCTACGGCACCACTTACCGTCACTACTCTTATCGCCAGCCTCTGTCTTCAGTGTACTACCTATCGTCTCTGCTCCCGTACTATCATATCCCGTACATCGATTACGTGCCGAGGCTCTCGCAGGCTGAACTGATTTACCGTCCAACATCTCGGTCGGTAACTCGACTCGTGACGTACCCTGATGTGCCACATCACGTGGTGAGAGTCAGGGTCCGCCCATCCGTGGTCCTCCGTGAGCTGGACCGAATCGCTTACCGACGCCGCCCAGCACTGGCCATCTCTGCCGTCGATGACTTCTTGCGCTCCGAAGCAACCAAGACTTTCGAAGATGAGACCCGTCGAATTCGCGCCGACACTGCGGCTTTGATCCACCGGGCTCGCTCTGTGGTGCCGCGCGCCAAGTCCTTAGCACCACTCGACACCATCTACTCATATTCATACGGCGAACCGATCCCGTACCGTTTCAGCAATGACGCTTACATTGCTAAGCTTTTGGTGCCCCTACGCAGCGTCGCAGATAGCATCCACAATCTTTCCTTCTATCACGAGCCAGCCAAGAAGTTCACTGGACGCGGCAACCTCGCGTGCGTGCACTACTCCGGTAAGAAGGCCTTCTCCAACCGTAGGCCACTTTACAAGGAGCTCAGCATCAGGGATGACGTGAACCTGCTCTCGTTCTACGCGAAGAACAGGCTCGCGGCCGCCGGTCTGGCCGTCGAGAATGCAACAGTTAAACTGCTACCTTGGAGGCCGAGCCGCAAATTTCAGGCGCCTCAGATGATGGAAGATCCTTCACGTGAGCTGAAGGCAGCCAAAGCGGAACGCGAGGCCAGGTTCCGAGCCTCCACGGCCGAACCGGTTTTGGCTCCCACTGCAGATTTAGCTGAAATCAAGAAAAAAAGGCAACAGGAAGCCAGAGCTGCCGAAGAAAAGGCTTTAAAGGATGAGGCGAAACGCGAGGCTGAACGAAAAGCTCAGGCCGAGCGAGAAGCCGCTGAAAAAAAGAAAGCAGAGGAAGAAGCTAGAAAAGCGGACGAGGCCAAACGTAAGGCTGAAGAAGAAGCCCGTAAGGCTGAAGAAGCTCGGTTAGCTGAAGAGGCTCGTCTGGCCGAAGAGGCGAGATTAGCTGAAGAAGCCAGAAAGGCCGAAGAAGAAAGGCTAGCTGAAGAAGCTAGATTAGCAGAGGAGGAACGTATAGCGGAAGAGATTAGATTGGCCGAAGAGGCAAAGTTGGCAGAAGAAGAAAGGCTTGCCGAAGAAGCGAGATTAGCAGAAGAAGCCAGATTGGCTGAAGAAGCGAAATTAGCAGAAGAGGCTAGGCTAGCAGAAGCTAGAATGGCAGAGGAAGCGAGATTAGAAGAGGAGAGGCTGGCTGAACAAATTAGACAAGAAGAGCTTGCGAAATTAGAGGAACTAGAAAAACAGGCACAGGAAGAACGCGAAGCAGAACTTGCACGACAGGCTGCTGAATTAGCCGAGATCGCAAGGCAAGAATCAGAGTTGGCAGCTGCGCGTTTGGAAGAGCTGTCGCAGAGTGGTTCCGCTACAGATGTTCCAGAGTCTAGTGCTGAGGAACCGGAACCTATCATAGAAGAGCCAGAATCACCCCAGGTAGTCCCTGATGCGCCAGCAGAGACAACAGAAGCTGAGTTAGAACAAGCTGATGCCAGCGAAGATGAAAGAGCAGAGCCTGATCTTACCGACGAAGAATAA
Protein
MVYESDFYTTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARVLSTVGQRERAFEADPLGTPRDHMDVLLAQAHGRPLHAAHRHTPRHYVVVDRDPIAPRRAEEQYSYSYSSTSQRSAGSGLPQRSSYSNTVERRTGSGPGGYSYTSERSSNLGGPGGYSYSSTSSGRLPYGTTYRHYSYRQPLSSVYYLSSLLPYYHIPYIDYVPRLSQAELIYRPTSRSVTRLVTYPDVPHHVVRVRVRPSVVLRELDRIAYRRRPALAISAVDDFLRSEATKTFEDETRRIRADTAALIHRARSVVPRAKSLAPLDTIYSYSYGEPIPYRFSNDAYIAKLLVPLRSVADSIHNLSFYHEPAKKFTGRGNLACVHYSGKKAFSNRRPLYKELSIRDDVNLLSFYAKNRLAAAGLAVENATVKLLPWRPSRKFQAPQMMEDPSRELKAAKAEREARFRASTAEPVLAPTADLAEIKKKRQQEARAAEEKALKDEAKREAERKAQAEREAAEKKKAEEEARKADEAKRKAEEEARKAEEARLAEEARLAEEARLAEEARKAEEERLAEEARLAEEERIAEEIRLAEEAKLAEEERLAEEARLAEEARLAEEAKLAEEARLAEARMAEEARLEEERLAEQIRQEELAKLEELEKQAQEEREAELARQAAELAEIARQESELAAARLEELSQSGSATDVPESSAEEPEPIIEEPESPQVVPDAPAETTEAELEQADASEDERAEPDLTDEE

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
789
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.149
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00733
outside
1  -  789
 
 

Population Genetic Test Statistics

Pi
241.463903
Theta
186.548889
Tajima's D
0.493592
CLR
1.65957
CSRT
0.51782410879456
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 RPALAISAVDDFLR 100.00 6e-07
28556443 SLAPLDTIYSYSYGEPIPYR 100.00 2e-04
28556443 LLVPLR 100.00 0.030
28556443 LAAAGLAVENATVK 100.00 0.030
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