Gene

KWMTBOMO15386

Pre Gene Modal

BGIBMGA005105

Annotation

PREDICTED:_putative_epidermal_cell_surface_receptor_[Bombyx_mori]

Location

Bomo_Chr25(-):10989918-11008955      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.197

CDS

ATGAATTGTAAAATAGCTAACGACGAAGAAGAAGTGCCATCAACTACGTCATCACAAACACTAGAGACATTACCTCCAATCTCAACTCCTACACCAAGAATAATAGAAGTGACAGAAAACGTGACCGAAGCAGAATTGACGAAAGAAGCAGAAGTTACAACAGAAGTTCAAGAAGCTATCGAACCAAAACCACAACCTAGACTACTCAATTTAAATGTAGATGAACTTCAAAACTTCGCGAACGCACTACACAATCAGACTATCGAGAAGAGCAGTAAAAAGGGTTTGGATTTGAGTGACGTAAATCTTGATGAAGAAGACGACGAAGTTCCGAGGATACACGATCACAAGAACAAGAATATTCCGGACAAATTTTATTCAAATTTACAAGCGCCTTTCCATCATTTATTGAATAACGAACGGGGCTCGGATGAAATCGGAACGTGCAAAGAAAACGAAATCAGTTATAAGATCGGTGATCATATGGATCGTGGATGCGAAGAATCATGTGAGTGTACTCCGGGCGGCGTTTTCGAATGTTCACCGCGCTGTAAACATCCTTACATTCGCAGCGGGCGACGATTGAACGATCCCTTATGCTTTGAATCTCCTGTAGACAGCTGCTGCTCTATTATCGCTTGTTCCACTGGTAATGGAGATACTAAGCCAATGAAACTGGATGTTTGCCGCTACGGCAACGATACATACCCGGTCGGGACCAAATGGAATATCGGATGTGAACAGAGCTGCATGTGCGAACCTAATTCTGTAGCTACGTGCAAACCTCGATGCAAACAATACAGTCCGTCCGAGAAATGTATCAACGTCCAAGATCCGAATGACGCGTGCTGCGAGATCCAAGTGTGCGATGTATCACAAGACGTTCACGAAGAACCGCCTGATAACGTCACATCTTCTACGACAAGCGCTAGTGAGACGGCAAGAAGCTTTGATATGTCGGAAGAATTAAAATCGACCAGTAGACCCCTCGTCTTAGCTGAACCCATCGGCTCAGTCAAAGTACTGAACAATAACTCAGTCCAAGTCAATCTCATCCACGTGAACACAACTGAAGATCCAGTCCATTTACTATTAAGCGATGATGGCGGAAAAACATATCAAGACGTAGAACTTAAGTACTCGAATTTGATTCTTAATCTTGACGGCGGTAAAGATTACATTCTGAAAACAAAAGAAACCGGTACTAAATTTAACTTCACTATAACGACAACAGCCTTCGCTGAGAATGAAGTGAAGGTTGGAGCAGAAGATATGAGAAACGATACCAAAGAAGGGTGTTATGAAAATGGAAAGTTTTATGAAATTGGCGAAGAGTTCCATATCGGATGCTCGGAGTTGTGCGAGTGTACCGGCCCGGACAAGCGGGAGTGCGCGGCCCTGGTGTGTCCGTCGCATGTGGGCCTGGAGCTGATGTCCAAGGGCTGCGTGCGGTGGGCGCCCTCACCGCCCGCGGTGCCGCCCAACTGCTGCCCGCGGTCCGCCAGGTGCCTCAGCGATGGAACCTGCCATTACAAGGGAGTCGCTGTGCCTAACTGGAGTGAAGTCCCTCTCGACCTCACGGGCTGCGAGCAACGCTGTTTCTGCGAGAACGGAGAGCTGGACTGCCAGGAGGTCTGCTCTCCGCTACCAGCGGTTCCGCCTCAAAATTTCAGATGTCCGCCTTTGCACAGGCCGGCACCCGTCAATATATCTGACGAGGATTGTTGTAAGGAATGGGGATGTGTACCCAATGGCGAAGCACCACCGCCACCACCCGGGTTCCCTCAACAAGATTCTCGTCCCCAACAACCCTCCTTCCTTCCAACTATTCCCCCAGAGATCCACTTTCCGCAAGAGGATATTCCAGATTATGACCAGAATAACATTCATCGTCCCAGCAACCCCTTGGAGCCGGGCATACCAGGATTACCTCCAGGATTTTCAATGCCAACGAACTATGGAGAAGTTAATAAGAAATTATCTGTAATTAGTCTTCAAGCGGACTCTCCGAACAGTGTGAAGATGATGTTCGGACTTCCTCCCGTTCTGGTAGGACTACGTGGAAGTGTGGACTTGAGATATACTGATAAGGTAGACGAAGATGTATCTCAGTGGAGTTCCCAAGTGTTCGCTCCGGCTGACGAGGTGCTGACCACGCCGCGCTTGGAGTTCCGACTGACAGGCCTGAAGCCGTCGACAACGTATAAGATCCGGGCGAAGCTCTACCTCCATAACTTACCCGTCGAACCGAAAAGCGAAGTCTATACTGTTCGGACCCAGGACGCGCCGACTATCGAGACACCGGTCGAAGAGAAACGCAAAGAAATTGACAGTAAACTAACAGTTTTGGAAGTAAACGATACAACAGCACAGCTCAACTGGAGACGCTTCTCTGAGGAAGAACTGCAGTACATTGATGGCATACAAGTCAGGTATCGTCCAGTGGGCACGCCTATATACAGCATGACGGAGCTCCTCCACCACAGCAGACCTGCAGTAGAACTGCACGAGCTGCGTCCAGGAACTCCATACGAAGCCTCGCTGGTCCTGATCCCTCCTCCGCGGAGTAACACAGAACTGATAGACCCTGGTCGCGTGGAGTTTACCACTGCGCCTTATACCGACCCGTACAACTGGTCGGTGACGGTGGAGGCGTTGTCGGTGGGCGCGGGCGCGGTGCAGGTGTCGTGGCGCGGCGTGCCGGCGCCGGCCGAGCGCTGGGTGCGCGTGTACCGAGCCGCGCACTCGTGCGGGCGGCGGGCGGCGGGCGGGGCGCGGGCCGCGGGGAGGGAGCACGACGCCTTCACACTCGCCGCGAGGGACGCGCCCACCACGCTCACTCTCAGCGGCCTGGAACCGGATTCAAGATGTCGCGTTTGGCTCGAACTGTTCCTGACGAACGGGAAGGTGAAGACAAGCAACGTGCTGGAGATCAACACGAGGCCGGCGGACGAGCCTGAGGACGTGGACAATGAAATCGAAGCATCCTCAGTGTCCGGCAGCCGCAGTGCAGAGCGCGGGGACTACTACGGAGGGCTGGTCGTCGCCGGAGTGCTGGCGGCCCTCGGGGCGCTGACCTCCCTACTGCTGCTGCTCGTTGTGGTCAGACGACACCGTCCTAGATCCGTGCCCATCACACCAGTACCAACAGCTCCGAGAGAGTCGTCTCTACCTCCCTACGACAATCCTGCGTACAAACTGGAATTACAACAGGAGACAATGGATCTCTGA

Protein

MNCKIANDEEEVPSTTSSQTLETLPPISTPTPRIIEVTENVTEAELTKEAEVTTEVQEAIEPKPQPRLLNLNVDELQNFANALHNQTIEKSSKKGLDLSDVNLDEEDDEVPRIHDHKNKNIPDKFYSNLQAPFHHLLNNERGSDEIGTCKENEISYKIGDHMDRGCEESCECTPGGVFECSPRCKHPYIRSGRRLNDPLCFESPVDSCCSIIACSTGNGDTKPMKLDVCRYGNDTYPVGTKWNIGCEQSCMCEPNSVATCKPRCKQYSPSEKCINVQDPNDACCEIQVCDVSQDVHEEPPDNVTSSTTSASETARSFDMSEELKSTSRPLVLAEPIGSVKVLNNNSVQVNLIHVNTTEDPVHLLLSDDGGKTYQDVELKYSNLILNLDGGKDYILKTKETGTKFNFTITTTAFAENEVKVGAEDMRNDTKEGCYENGKFYEIGEEFHIGCSELCECTGPDKRECAALVCPSHVGLELMSKGCVRWAPSPPAVPPNCCPRSARCLSDGTCHYKGVAVPNWSEVPLDLTGCEQRCFCENGELDCQEVCSPLPAVPPQNFRCPPLHRPAPVNISDEDCCKEWGCVPNGEAPPPPPGFPQQDSRPQQPSFLPTIPPEIHFPQEDIPDYDQNNIHRPSNPLEPGIPGLPPGFSMPTNYGEVNKKLSVISLQADSPNSVKMMFGLPPVLVGLRGSVDLRYTDKVDEDVSQWSSQVFAPADEVLTTPRLEFRLTGLKPSTTYKIRAKLYLHNLPVEPKSEVYTVRTQDAPTIETPVEEKRKEIDSKLTVLEVNDTTAQLNWRRFSEEELQYIDGIQVRYRPVGTPIYSMTELLHHSRPAVELHELRPGTPYEASLVLIPPPRSNTELIDPGRVEFTTAPYTDPYNWSVTVEALSVGAGAVQVSWRGVPAPAERWVRVYRAAHSCGRRAAGGARAAGREHDAFTLAARDAPTTLTLSGLEPDSRCRVWLELFLTNGKVKTSNVLEINTRPADEPEDVDNEIEASSVSGSRSAERGDYYGGLVVAGVLAALGALTSLLLLLVVVRRHRPRSVPITPVPTAPRESSLPPYDNPAYKLELQQETMDL

Uniprot

A0A2A4JWC5   A0A3S2LIA9   A0A2A4JUK9   A0A2J7Q2H9   E2ABW4   A0A1W4WES1   + More
A0A0T6B829   A0A2J7Q2J3   A0A067REN2   E0VSL8   A0A0A9W4N7   A0A0A9YUK4   A0A1B6KA99   A0A1B6E0G0   A0A0A9VU70   A0A0A9YXR2   A0A1B6KX52  

Pubmed

20798317    24845553    20566863    25401762   

EMBL

NWSH01000553    PCG75692.1    RSAL01000107    RVE47269.1    PCG75691.1    NEVH01019370    + More
PNF22791.1    GL438386    EFN69059.1    LJIG01009291    KRT83374.1    PNF22793.1    KK852683    KDR18539.1    DS235751    EEB16374.1    GBHO01043784    GBHO01043780    JAF99819.1    JAF99823.1    GBHO01043779    GBHO01015135    GBHO01007720    GBHO01007711    JAF99824.1    JAG28469.1    JAG35884.1    JAG35893.1    GEBQ01031853    JAT08124.1    GEDC01005899    JAS31399.1    GBHO01043782    GBHO01015141    JAF99821.1    JAG28463.1    GBHO01015142    GBHO01015139    GBHO01015138    GBHO01007716    JAG28462.1    JAG28465.1    JAG28466.1    JAG35888.1    GEBQ01023972    JAT16005.1   

Proteomes

UP000218220    UP000283053    UP000235965    UP000000311    UP000192223    UP000027135    + More
UP000009046   

Pfam

PF00041   fn3

Interpro

IPR001007   VWF_dom        + More
IPR036116   FN3_sf       
IPR013783   Ig-like_fold       
IPR003961   FN3_dom       

SUPFAM

SSF49265   SSF49265       

Gene 3D

2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

A0A2A4JWC5   A0A3S2LIA9   A0A2A4JUK9   A0A2J7Q2H9   E2ABW4   A0A1W4WES1   + More
A0A0T6B829   A0A2J7Q2J3   A0A067REN2   E0VSL8   A0A0A9W4N7   A0A0A9YUK4   A0A1B6KA99   A0A1B6E0G0   A0A0A9VU70   A0A0A9YXR2   A0A1B6KX52  

KEGG

101740079    no KO assigned | (RefSeq) putative epidermal cell surface receptor

GO

GO:0016021   GO:0005515   GO:0006508   GO:0000150   GO:0000724   GO:0003690   GO:0003697   GO:0008094   GO:0005524   GO:0006281   GO:0006259  

Length:

1076

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.89806

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00002

outside

1  -  1012

TMhelix

1013  -  1035

inside

1036  -  1076

 

 

Pi

211.845047

Theta

193.643349

Tajima's D

0.520879

CLR

0.734774

CSRT

0.518474076296185

Interpretation

Uncertain