SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15381
Annotation
PREDICTED:_trypsin-2-like_[Bombyx_mori]
Full name
Hypodermin-A      
Location in the cell
Extracellular   Reliability : 1.994
 

Sequence

CDS
ATGTTTCCTCATTCAACTTATCTAAGTATTCCATGTGAAGGTAATTTCATGTGTGGTTCTTCAGTTTTGGGCCAAAATGTTCTTCTAACGGCGGCTCATTGTGTATGCAACTGTAATTTAAGAAAAAACAGATTAGAAGCTCTAGCTGGACATGCGTTAATCAAAAAGATGACTCTTCGACGGAGTGTTACGGCTATGACAGTTCATGCAAAGTATAATGAAAAAACAATAGAAAATGACATAGCAATATTATGGCTCGATCGTAGATTATTGTTTGGGGATAACGTGAAACGCGTTATAATTACAAAAACATTTCCATTCACAACCGAAGCCTGTATCGCTGGCTGGGGACTTATTAACGTGAGTAAAACCACTTGA
Protein
MFPHSTYLSIPCEGNFMCGSSVLGQNVLLTAAHCVCNCNLRKNRLEALAGHALIKKMTLRRSVTAMTVHAKYNEKTIENDIAILWLDRRLLFGDNVKRVIITKTFPFTTEACIAGWGLINVSKTT

Summary

Similarity
Belongs to the peptidase S1 family.
Keywords
Direct protein sequencing   Disulfide bond   Hydrolase   Protease   Secreted   Serine protease   Signal   Zymogen  
Feature
propeptide  Activation peptide
chain  Hypodermin-A
EC Number
3.4.21.-
EMBL
KQ459324    KPJ01455.1    KPJ01456.1    KQ460045    KPJ18047.1    AGBW02008116    + More
OWR54136.1    AGBW02008010    OWR54306.1    ODYU01001393    SOQ37513.1    ODYU01002383    SOQ39812.1    NWSH01001202    PCG72143.1    ODYU01009360    SOQ53730.1    OWR54305.1    ODYU01006324    SOQ48069.1    JTDY01001347    KOB74130.1    ODYU01003944    SOQ43317.1    DS232962    DS231983    EDS27062.1    EDS30402.1    JTDY01006244    KOB66174.1    LJIG01009274    KRT83408.1    KZ150000    PZC75312.1    ADMH02001669    ETN61483.1    CH902625    EDV35247.1    RSAL01000249    RVE43502.1    KOB74131.1    JTDY01005274    KOB67168.1    GFDL01004672    JAV30373.1    AM765883    CAO78784.1    AM765881    CAO78782.1    AM765879    AM765880    CAO78780.1    CAO78781.1    CM000361    CM002910    EDX03439.1    KMY87631.1    AY752848    AAV84261.1    RSAL01000282    RVE43013.1    AM765882    CAO78783.1    BABH01010245    CH480820    EDW53972.1    AERX01014184    AERX01014185    JXUM01062824    KQ562217    KXJ76377.1    GEHC01000378    JAV47267.1    AE014298    AY118432    AAF48647.1    AAM48461.1    DQ539257    DQ539259    DQ539260    ABG02778.1    ABG02780.1    ABG02781.1    KY087128    KY087137    APG58489.1    GFDL01005572    JAV29473.1    LNIX01000005    OXA54258.1    CH954180    EDV46403.1    KK852655    KDR19292.1    CH480832    EDW46170.1    CDPU01000028    CEO52428.1    GFDL01005165    JAV29880.1    KY087112    APG58473.1    KY087106    KY087108    KY087111    KY087113    KY087117    KY087126    KY087136    KY087140    APG58472.1    KY087107    KY087139    APG58468.1    KY087134    APG58495.1    KY087143    APG58504.1    KZ506167    PKU41078.1    KY087138    APG58499.1    RCHS01002416    RMX47449.1    GEZM01091341    JAV56896.1    CH477239    EAT46500.1    BABH01010242    BABH01010243    CH477397    EAT41804.1    AM765878    CAO78779.1    AM765877    CAO78778.1    JXUM01008849    KQ560270    KXJ83415.1    KV878981    OJJ97808.1    CP026253    AWP09961.1    GFDL01006008    JAV29037.1    KY087110    KY087115    KY087127    KY087141    APG58476.1    BN001307    CBF86700.1    AACD01000039    EAA64477.1    KY087105    KY087109    KY087121    KY087125    KY087135    APG58470.1    CM000366    EDX18120.1    KY087114    APG58475.1    KY087116    APG58477.1    KL895518    KGL82641.1    AM765861    CAO78762.1    KOB74132.1    X74303    L24914    KY087133    APG58494.1   
Pfam
PF00089   Trypsin        + More
PF01390   SEA
PF00431   CUB
PF00057   Ldl_recept_a
PF00090   TSP_1
Interpro
IPR001254   Trypsin_dom        + More
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       
IPR018114   TRYPSIN_HIS       
IPR033116   TRYPSIN_SER       
IPR036364   SEA_dom_sf       
IPR035914   Sperma_CUB_dom_sf       
IPR036055   LDL_receptor-like_sf       
IPR002172   LDrepeatLR_classA_rpt       
IPR000859   CUB_dom       
IPR023415   LDLR_class-A_CS       
IPR000082   SEA_dom       
IPR000884   TSP1_rpt       
IPR036383   TSP1_rpt_sf       
IPR012224   Pept_S1A_FX       
SUPFAM
SSF50494   SSF50494        + More
SSF82671   SSF82671       
SSF57424   SSF57424       
SSF49854   SSF49854       
SSF82895   SSF82895       
PDB
2B9L     E-value=7.07119e-11,     Score=155

Ontologies

Topology

Subcellular location
Secreted  
Length:
125
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.50515
Exp number, first 60 AAs:
0.2659
Total prob of N-in:
0.07775
outside
1  -  125
 
 

Population Genetic Test Statistics

Pi
183.091815
Theta
161.573735
Tajima's D
1.693143
CLR
0
CSRT
0.823258837058147
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号