SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15378  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA005106
Annotation
PREDICTED:_unc-112-related_protein-like_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.398
 

Sequence

CDS
ATGTTCAAGAAAGATTGGTCGGACCATGCCCTCTGGTGGCCGACTAGAAACAAATGGCTCTCCAGACCAAAACACACCCTGGACCAGTACGGAGTTCACGCGGACGCCGCCCTACACTTCACGCCCATGCACAAACCACTAAGAATCCAGCTGCCGGACTTGAGATTCATCGACTGCAAAATTGACTTCTCAATTGACACATTCAGCGCCGTTATACAACTATGTAAAAATCTTGGTATAAGGCATTCTGAAGAACTATCGCTGTGCTATCCGCTCGAGGCGTCACATCTAAAACAGAACTATCAAAATCTGAAAGAAGCTAAAAGAATAAAGAACACGCAGGCTCCGGACACGAATACATTCATTGCAGCGACAAGAGGCTCTTCGAATAGCTTGGATAGATCAAACGGCCCGTGTCCCGCTACCCCGCCCCCGCCGAGGTCACTGTCTGCGACTCCTGTTGCGTCACAACAAAATGGCACACTTCGTCGCTACGGACATCACATCTACAGCACACAGAGCGACGGATCAAGCGACGGCGGTTACTGCGGCACCCCGCCCCGTGCCGCCTCCATGGACGCTCTCGATTCCTTAGCGGAACTGTCCCTGGCCGACTCACCGATAGAACCGGACTCGCAATCCCGGGAATCGTTGCTCTCGCCCAAGTCTCTCCTGGAACGAGCCAGAATGAATGTCGGATGGTTAGACTCTTCACTGTCCATCATGGAGCAGTACGTACGTGAATGGGACACGCTTCAGCTGCGGTTCAAGTTCTATTCGTTCTTCGACCTGACGCCGAGAGCTCAGGACGCGCCTCGACTCAACCAGCTGTACCAGCAGGCACGCTGGCAGATCCTCAACCAGGAGGTCAACTGTACCGAGGAGGAGATGATGCTGTTTGCTGCTTTGCAACTCCAAATCGAGTTACAGACCCTGGCCGGAGGCAGTGCCGAAGCTGCCGACGGCTACGGAGCCAGCGCCGGCAACGCTTCAGCCCCGGAAGACGAGATCGATGCTGCGCTCTGCGAGCTGCAAGCCCAGCTGGAGGGCGGACCCCCCGCCCGACAAGACATCACACACGTCCCGGAACTGGCCGGATACCTCAAGTATCTAAGACCGAAACGTTTCACGTTGAAAGCGTACAAGCGCGGCTGGATATCGTGCCGCGACGGCGTGCTGCGCATACACGGCTCGCAGGAGGCGGCCGCGCGCGGCGAGCCTCCCTCGTGCGCCGTCGAGCTGCGCGGGGCGGAGGTAACACCAGACGCTCATCCGGCTTCTGGTAGATACAGCATCAAGTTGGAAGTGCCCTCCGAAGATTCGATGCACGAGATGTGGTTGAAATGTGAAAACGAGGATCAGTACGCGGAGTGGGTGGCGGCGTGCAGACTGGGCTCGCGCGGGCGCTCGCTGGCCGACGCGCAGTTCGCGAGCGAGGCGGGCAGCGTGCGCGCGCTGCTGGCGCTGCAGCGGCCCCGCCCCGCCGCCGCGCTCTCCGCGCACGCGCTGCCGCACAACCTGCAGCCGGAGAACTACCTGGCGCCGCGGTACCTCAAGAAACTCAAGTCCAAGTTCACTCAACGCTTGCTCGAGAGTCACGCTAACGTCAAAGACCTACCCCTCCTCGAAGCGAAGCTCCAGTACATCAAGACCTGGCAGAACCTCGCCGATTACGGACAGACCTTGTTCGTGGTTCGGTTCATGGGCCACAAGAAGGACGAGATCATCGGCATCGCCAACAACAGGATCATGAGGCTGGACCCGCACACCGGAGATCACATTAAGACCTGGAGGTTCAGTAACATGAAGGCCTGGAACGTGAACTGGGAGATAAAGCACATGATGGTCCAGTTCGAGGAGGACAACATCATATTCTCCGTACAGTCGGCCGACTGCAAAGTCGTACACGAGTTCATCGGCGGCTACATATTCCTTTCGATGAGGTCCAAGGATGCCAACCAGACATTGGACGTTGAACTGTTCCACAAACTGACCGGCGGGTGGACGTAA
Protein
MFKKDWSDHALWWPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNLGIRHSEELSLCYPLEASHLKQNYQNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGTLRRYGHHIYSTQSDGSSDGGYCGTPPRAASMDALDSLAELSLADSPIEPDSQSRESLLSPKSLLERARMNVGWLDSSLSIMEQYVREWDTLQLRFKFYSFFDLTPRAQDAPRLNQLYQQARWQILNQEVNCTEEEMMLFAALQLQIELQTLAGGSAEAADGYGASAGNASAPEDEIDAALCELQAQLEGGPPARQDITHVPELAGYLKYLRPKRFTLKAYKRGWISCRDGVLRIHGSQEAAARGEPPSCAVELRGAEVTPDAHPASGRYSIKLEVPSEDSMHEMWLKCENEDQYAEWVAACRLGSRGRSLADAQFASEAGSVRALLALQRPRPAAALSAHALPHNLQPENYLAPRYLKKLKSKFTQRLLESHANVKDLPLLEAKLQYIKTWQNLADYGQTLFVVRFMGHKKDEIIGIANNRIMRLDPHTGDHIKTWRFSNMKAWNVNWEIKHMMVQFEEDNIIFSVQSADCKVVHEFIGGYIFLSMRSKDANQTLDVELFHKLTGGWT

Summary

EMBL
BABH01019686    BABH01019687    AGBW02008116    OWR54140.1    KQ459324    KPJ01460.1    + More
KQ460045    KPJ18042.1    KZ149949    PZC76696.1    ODYU01003577    SOQ42515.1    NWSH01000360    PCG76996.1    KZ288194    PBC33870.1    ADTU01009973    ADTU01009974    ADTU01009975    ADTU01009976    QOIP01000009    RLU18436.1    KK107119    EZA58693.1    KQ977276    KYN04472.1    GL888529    EGI59737.1    GL450687    EFN80644.1    KQ414667    KOC64666.1    KQ976455    KYM85118.1    KQ982686    KYQ52331.1    KQ981305    KYN42938.1    KQ980734    KYN13802.1    GL766762    EFZ14669.1    KK853846    KDQ71557.1    LBMM01001175    KMQ96777.1    GL439483    EFN67178.1    GEDC01031571    GEDC01006243    JAS05727.1    JAS31055.1    GBYB01004739    JAG74506.1    GBYB01006944    JAG76711.1    NEVH01011187    PNF32136.1    GEZM01001455    GEZM01001454    JAV97753.1    GEBQ01027144    GEBQ01023009    JAT12833.1    JAT16968.1    KQ971354    EFA07132.1    KYB26554.1    GBHO01036078    GBRD01006765    JAG07526.1    JAG59056.1    GFDL01000323    JAV34722.1    GFDL01000304    JAV34741.1    GFDL01000305    JAV34740.1    GDKW01001188    JAI55407.1    ACPB03001672    GDIP01060588    JAM43127.1    GDIP01217621    JAJ05781.1    AJWK01025185    AJWK01025186    AJWK01025187    AJWK01025188    GDIP01229229    GDIP01146131    GDIQ01194605    GDIQ01084284    GDIQ01081237    JAI94172.1    JAK57120.1    ATLV01012598    ATLV01012599    ATLV01012600    ATLV01012601    ATLV01012602    KE524806    KFB36913.1    GDIP01075341    JAM28374.1    GDIP01251864    GDIP01185573    GDIP01111232    GDIP01089996    JAM13719.1    GDIP01227164    JAI96237.1    GDIP01227165    JAI96236.1    AXCN02000024    GBBI01002567    JAC16145.1    AXCM01002611    DS235857    EEB19040.1    GDIP01130136    JAL73578.1    GFDF01003063    JAV11021.1    CVRI01000017    CRK90171.1    GGFM01001814    MBW22565.1    GGFJ01002657    MBW51798.1    GANO01000753    JAB59118.1    GGFL01004458    MBW68636.1    GDIP01042735    JAM60980.1    GDIP01251865    GDIP01236471    GDIP01113986    GDIP01089997    GDIQ01061505    LRGB01002544    JAI86930.1    JAN33232.1    KZS07187.1    KK854783    PTY18685.1    GGFK01003064    MBW36385.1    JXUM01091496    KQ563919    KXJ73068.1    GGMS01014283    MBY83486.1    APCN01002030    AAAB01008987    EAA01071.2    KQ435848    KOX71078.1    GDIP01122246    JAL81468.1    GL732580    EFX74788.1    JRES01001238    KNC24399.1    GFXV01001774    MBW13579.1    ABLF02027257    ABLF02027265    ABLF02027266    GDIP01250615    JAI72786.1    GDAI01000311    JAI17292.1    CH379069    EAL31167.1    CH479261    EDW39459.1    KA649513    KA649776    AFP64405.1    CH477308    EAT44048.1    OUUW01000009    SPP84966.1    CH954178    EDV52003.1    CH933809    EDW19632.1    KRG06717.1    CH479211    EDW33088.1    CH379070    EAL29932.1    KRT08500.1    CP012525    ALC44922.1    CH964095    EDW78905.1    GFWV01018821    MAA43549.1   
Pfam
PF00373   FERM_M        + More
PF18124   Kindlin_2_N
PF00169   PH
Interpro
IPR037843   Kindlin/fermitin        + More
IPR019748   FERM_central       
IPR011993   PH-like_dom_sf       
IPR001849   PH_domain       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR019749   Band_41_domain       
IPR035963   FERM_2       
IPR040790   Kindlin_2_N       
IPR000299   FERM_domain       
IPR019747   FERM_CS       
IPR037837   PH_Kindlin/fermitin       
SUPFAM
SSF47031   SSF47031       
Gene 3D
PDB
5XQ1     E-value=4.51688e-53,     Score=528

Ontologies

Topology

Length:
669
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0274
Exp number, first 60 AAs:
0.00014
Total prob of N-in:
0.00056
outside
1  -  669
 
 

Population Genetic Test Statistics

Pi
293.995554
Theta
186.412387
Tajima's D
1.811331
CLR
0.410716
CSRT
0.854507274636268
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 FYSFFDITPR 100.00 5e-05
28467696 CEMIPIEWVTR 100.00 5e-05
26822097 SIADAQFASEAGSVR 100.00 0.001
25044914 NTPVSEIEECFKR 100.00 0.001
28467696 NTPVSEIEECFKR 100.00 0.001
25044914 GAETIGIIQIK 100.00 0.004
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