SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15374
Annotation
PREDICTED:_pickpocket_protein_28-like_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 3.859
 

Sequence

CDS
ATGGGCATCAAGCTTGTCTGTCTGCCTATCGAAGCAACTACAAATTATGGATCTCTAATTTTCAGACTTCTCTGGATTGGAGTTTTTGTGGTAATGATGAGCGCGATGTTTTACTATCTCCACCACACGTGGTTTGAGATATTGACAAAACCGCTGGTTATCAGCATGGAGTCTTCTACCTATCCCATATCAAAAATTAACTTTCCTGCTGTAGCCTTTTGTAATACGAACAGAATAAGCAGAAAGGCTTTGAAAGAATTTTCTCAGATAATGCATAGGAGCATGGCATTAAATAACGAAACAATAGAAGAAGTTGAACTTTTCTTTTTACAATATGGCCGCCTTCTAGATTATTCGTATGATGATATCTTAAGGAATCACCCCTTTTTGGATATAATAACGCTCAAAGATTTCTATTCACAAAATACATCGGAAGTCATGCAAAAGTTGGCTCCGAAATGCGACGAAATGCTACTCAGATGCGGATGGGGCAGCGAAGAAGTTAATTGCAAAACTAATTTTGACGTCCAATTGACGGTCAGGGGACATTGTTGTATATTCAACTATATTCAGGAGGACTCTGTCGACGATCCGAATTCAGCTAACAAGGACGTCAAACGGCAGTCCGTACCGGGAGCACTTTATGGATTACGTTTGGTTCTTGACCCGATGATTGATGACTACGCCTATACCGTAAACAACATACGAGGATTTGATGTTTTCCTGTTTTCACCCGGTCATTTCGCCGATTTTAGCGGGGGCAAAGTGATTTATCGCATAGTGGAGCCTGACAGAGCAGAGTTCATTGAACTATCTTCTATACAACAAAGAGCTGCTGCCGAGGTCCGGAAATATCCTGTTCGGATTAGAAAATGTTTTTTCCAAGACGAGAACGGTTCTTCACACAGGAAAACTTATACATACAACTATTGTATAATTAATTGTCGCATCAAGTCCATACAGTCGCTTTGTAAATGCACTCCTTACTTTTTGCCCGGTAAAGATAGGGCACGTACATGTACACTAGAAGATTTAAAATGCCTTAATAAATATAGGGAAAAACTTCTCTACTTGTATCCAAATGACGCCCAGGATCTTCGCGGACTTGAAACAGAAGTGGAAGATTCCCTTTTCTGTCCCAATTGCCTACCCGATTGTGAACCTATACAGCACTATGCCAAATCTTACAAGATATCTATAAATACAATTGAAGAGCACTTTGTACCATTCAGGAGTGATATGTTTGACAAAATAAACATCACCGGAAAAATCCTAGTTAGCATTTATCATTCTGCACCCAGCGGGACCTTGGATCGCCTTGATGTCGTTTCGTATTGGTTCGAAATATTAAGTAACATCGGTGGATTCTGCGGTTTTCTTTTAGGGTTTTCTCTTTTTGCCATTGTTGAAGTGTTTTACTACTTTGTCGTTCGTTTTACAATTGTTGTTACAAACGCCTACAACGTTGCTAAATAG
Protein
MGIKLVCLPIEATTNYGSLIFRLLWIGVFVVMMSAMFYYLHHTWFEILTKPLVISMESSTYPISKINFPAVAFCNTNRISRKALKEFSQIMHRSMALNNETIEEVELFFLQYGRLLDYSYDDILRNHPFLDIITLKDFYSQNTSEVMQKLAPKCDEMLLRCGWGSEEVNCKTNFDVQLTVRGHCCIFNYIQEDSVDDPNSANKDVKRQSVPGALYGLRLVLDPMIDDYAYTVNNIRGFDVFLFSPGHFADFSGGKVIYRIVEPDRAEFIELSSIQQRAAAEVRKYPVRIRKCFFQDENGSSHRKTYTYNYCIINCRIKSIQSLCKCTPYFLPGKDRARTCTLEDLKCLNKYREKLLYLYPNDAQDLRGLETEVEDSLFCPNCLPDCEPIQHYAKSYKISINTIEEHFVPFRSDMFDKINITGKILVSIYHSAPSGTLDRLDVVSYWFEILSNIGGFCGFLLGFSLFAIVEVFYYFVVRFTIVVTNAYNVAK

Summary

Similarity
Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
EMBL
KZ149949    PZC76700.1    NWSH01000360    PCG77001.1    RSAL01000107    RVE47278.1    + More
AGBW02011359    OWR46786.1    ODYU01003502    SOQ42376.1    NEVH01020964    PNF20288.1    KQ981523    KYN40168.1    DS231845    EDS35952.1    KQ763832    OAD54711.1    CH477245    EAT46228.1    APCN01000896    UFQS01001084    UFQT01001084    SSX08906.1    SSX28817.1    AAAB01008987    EAA00980.5    KQ971354    KYB26357.1    AXCN02000266    UFQS01000116    UFQT01000116    SSW99925.1    SSX20305.1    GL452770    EFN76771.1    AXCM01011342    KQ434899    KZC10892.1    KQ414617    KOC68351.1    CVRI01000021    CRK91610.1    KK107119    EZA58688.1    SSX08905.1    SSX28816.1    ADMH02002100    ETN59185.1    CVRI01000009    CRK88708.1    UFQS01000961    UFQT01000961    SSX07978.1    SSX28212.1    NNAY01002936    OXU20265.1    KK107525    EZA49292.1    GL888239    EGI64128.1    KZ288205    PBC33128.1    OAD54712.1    CM000160    EDW98878.2    OUUW01000005    SPP81149.1    JRES01000984    KNC26446.1    RSAL01000289    RVE42927.1    CH902617    EDV42479.1    GL450824    EFN80350.1    EGI64129.1    SSX08907.1    SSX28818.1    JRES01001573    KNC21895.1    CH954182    EDV53791.1    CH479186    EDW38797.1    EDV42043.2    KQ461154    KPJ08433.1    KOC68350.1    CH480815    EDW43563.1    CCAG010022693    CCAG010022694    CM000364    EDX15113.1    CH480819    EDW53622.1    EDX14297.1    CM000070    EDY67632.2    AE014297    AAN14023.2    NWSH01000327    PCG77395.1    CH940650    EDW67730.2    KQ976870    KYN07823.1    CH916374    EDV91046.1    KQ971345    KYB27034.1    CP012526    ALC47831.1    CH964251    EDW83245.1    EFA05375.2    NEVH01016978    PNF24738.1    KQ982409    KYQ56656.1    AXCN02000752    EDW99207.2    AAAB01008980    EAA14549.4    CH933807    EDW13421.2    AAF57143.3    NNAY01000660    OXU27138.1    CH933806    EDW16499.2    ODYU01005000    SOQ45443.1    EDW16498.2   
Pfam
PF00858   ASC
Interpro
IPR001873   ENaC        + More
IPR020903   ENaC_CS       
PDB
6BQN     E-value=0.00289896,     Score=97

Ontologies

Topology

Length:
491
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
45.4635
Exp number, first 60 AAs:
21.98741
Total prob of N-in:
0.98019
POSSIBLE N-term signal
sequence
inside
1  -  18
TMhelix
19  -  41
outside
42  -  454
TMhelix
455  -  477
inside
478  -  491
 
 

Population Genetic Test Statistics

Pi
312.575962
Theta
165.698487
Tajima's D
2.111547
CLR
0.046326
CSRT
0.900304984750762
Interpretation
Uncertain
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