Gene

KWMTBOMO15373

Pre Gene Modal

BGIBMGA005108

Annotation

PREDICTED:_doublesex_isoform_X5_[Bombyx_mori]

Location

Bomo_Chr25(-):10776300-10778425      View in EpiBrowser

Transcription factor

DM

Location in the cell

Nuclear   Reliability : 3.839

CDS

ATGGGCTCATGGAAACGCCGCGTGCCCGATGACTGCGAGGAGCGTTCCGAACCCGGCGCCTCCAGTTCGGGCGTTCCTCGTGCCCCTCCTAACTGTGCGCGCTGCCGCAATCACAGGCTCAAGATCGAGCTCAAGGGTCACAAGCGGTACTGCAAATATCAGCATTGCACTTGTGAAAAGTGCCGCCTTACCGCAGACAGGCAGCGGGTAATGGCAAAGCAAACGGCAATCAGACGGGCCCAGGCTCAGGACGAAGCGCGTGCGCGTGCGCTGGAATTAGGAATACAGCCCCCGGGGCTGGAGTTGGATAGGCCTGTACCACCAGTGGTGAAGGCGCCACGCAGCCCCATGATACCGCCGTCGGCACCACGCTCCCTGGGCTCGGCGAGCTGTGACTCCGTACCGGGTTCACCTGGGGTGTCACCATACGCTCCACCGCCGTCAGTGCCTCCGCCGCCAACCATGCCACCACTGATACCACCCCCGCAACCCCGGCAACTAACCGCTTTAAAGACACAAAAACGTCAAGCATAA

Protein

MGSWKRRVPDDCEERSEPGASSSGVPRAPPNCARCRNHRLKIELKGHKRYCKYQHCTCEKCRLTADRQRVMAKQTAIRRAQAQDEARARALELGIQPPGLELDRPVPPVVKAPRSPMIPPSAPRSLGSASCDSVPGSPGVSPYAPPPSVPPPPTMPPLIPPPQPRQLTALKTQKRQA

Uniprot

Q9GR95   S5TJ21   S5TKE2   S5TKD7   S5TJ17   H9J6G6   + More
S5U9X4   S5U9Y8   S5TKD4   S5TJ24   Q9GV03   S5TSG3   W0I6E3   S5TSE9   S5TSG0   Q9GR94   S5U9Y1   Q9GV02   S5U957   S5TSF6   A0A0H5BJ09   A0A0H5BR49   A0A212FK73   A0A2Z5TDL7   A0A2Z5TMJ0   T2HTB1   A0A1V1H564   T2HQX1   A0A2H1WI83   A0A1V1GZK4   E3WC93   A0A0L7L343   W0IA80   W0IAY8   W0I6F0   W0IB59   E3WC92   D9ZD74   W0IAY3   D9ZD73   D9ZD79   D9ZD80   D9ZD72   D9ZD81  

Pubmed

11583933    23261436    24244545    24239545    19121390    26154510    + More
22118469    20728536    26227816    20633649   

EMBL

KF255805    KF255810    KF255812    KF255814    KF419163    AB052774    + More
AGS48294.1    AGS48299.1    AGS48301.1    AGS48303.1    AHF81632.1    BAB19780.1    KF255811    KF419159    KF419161    AGS48300.1    AHF81628.1    AHF81630.1    KF255831    AGS48318.1    KF255826    AGS48313.1    KF255806    KF255809    KF419160    KF419162    KF419164    AGS48295.1    AGS48298.1    AHF81629.1    AHF81631.1    AHF81633.1    BABH01019689    KF255808    KF419157    KF419158    AGS48297.1    AHF81626.1    AHF81627.1    KF255830    AGS48317.1    KF255819    AGS48308.1    KF255816    AGS48305.1    AB048543    BAB13471.1    KF255829    AGS48316.1    KF419165    AHF81634.1    KF255807    KF255813    AGS48296.1    AGS48302.1    KF255823    KF255824    AGS48311.1    AGS48312.1    BAB19781.1    KF255815    KF255818    KF255821    KF255828    KF419156    AGS48304.1    AGS48307.1    AGS48310.1    AGS48315.1    AHF81625.1    AB048544    BAB13472.1    KF255827    AGS48314.1    KF255817    KF255820    AGS48306.1    AGS48309.1    LC054300    BAS02078.1    LC054301    BAS02079.1    AGBW02008116    OWR54143.1    LC329332    BBA83992.1    LC329333    BBA83993.1    AB795825    BAN82533.1    LC155218    BAX24553.1    AB795824    BAN82532.1    ODYU01008773    SOQ52666.1    LC155217    BAX24552.1    AB548679    AB548680    BAJ25851.1    JTDY01003353    KOB69684.1    KF419143    KF419149    AHF81642.1    KF419147    KF419153    AHF81640.1    AHF81646.1    KF419145    KF419151    AHF81644.1    KF419144    KF419146    KF419148    KF419150    KF419152    KF419154    KF419155    AHF81648.1    AB548678    BAJ25850.1    GU930280    GU930282    GU930284    ADL40848.1    KF419142    AHF81635.1    GU930279    GU930281    GU930283    ADL40847.1    GU930285    ADL40853.1    GU930286    ADL40854.1    GU930278    ADL40846.1    GU930287    ADL40855.1   

Proteomes

UP000005204    UP000007151    UP000037510   

PRIDE

Q9GR95    S5TJ21    S5TKE2    S5TKD7    S5TJ17    H9J6G6    + More
S5U9X4    S5U9Y8    S5TKD4    S5TJ24    Q9GV03    S5TSG3    W0I6E3    S5TSE9    S5TSG0    Q9GR94    S5U9Y1    Q9GV02    S5U957    S5TSF6   

Pfam

PF00751   DM        + More
PF08828   DSX_dimer

Interpro

IPR026607   DMRT/dsx/mab-3        + More
IPR001275   DM_DNA-bd       
IPR036407   DM_DNA-bd_sf       
IPR014932   DSX_dimer       

SUPFAM

SSF82927   SSF82927       

Gene 3D

4.10.1040.10    

ProteinModelPortal

Q9GR95   S5TJ21   S5TKE2   S5TKD7   S5TJ17   H9J6G6   + More
S5U9X4   S5U9Y8   S5TKD4   S5TJ24   Q9GV03   S5TSG3   W0I6E3   S5TSE9   S5TSG0   Q9GR94   S5U9Y1   Q9GV02   S5U957   S5TSF6   A0A0H5BJ09   A0A0H5BR49   A0A212FK73   A0A2Z5TDL7   A0A2Z5TMJ0   T2HTB1   A0A1V1H564   T2HQX1   A0A2H1WI83   A0A1V1GZK4   E3WC93   A0A0L7L343   W0IA80   W0IAY8   W0I6F0   W0IB59   E3WC92   D9ZD74   W0IAY3   D9ZD73   D9ZD79   D9ZD80   D9ZD72   D9ZD81  

PDB

1LPV     E-value=2.18515e-15,     Score=196

KEGG

692415    no KO assigned | (RefSeq) Dsx, Bmdsx, dsx-dsr3, dsx-dsr4, dsx-dsr7, dsx1, dsx2, dsx3, dsx4, dsx5, ds

GO

GO:0046872   GO:0005634   GO:0043565   GO:0003700   GO:0006355   GO:0051082   GO:0000122   GO:0004818   GO:0005737   GO:0006424   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR12322  

Subcellular location

Nucleus  

Length:

177

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.31832

outside

1  -  177

 

 

Pi

270.504303

Theta

204.037874

Tajima's D

0.857727

CLR

0.547361

CSRT

0.615319234038298

Interpretation

Possibly Positive selection